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The map label for this gene is fliP [C]

Identifier: 13475305

GI number: 13475305

Start: 5160419

End: 5161084

Strand: Direct

Name: fliP [C]

Synonym: mlr8766

Alternate gene names: 13475305

Gene position: 5160419-5161084 (Clockwise)

Preceding gene: 13475304

Following gene: 13475306

Centisome position: 73.34

GC content: 50.3

Gene sequence:

>666_bases
ATGACTGAGCTCCAGCCGCCAATCCTGGCGCTTCTCGCAGTTACCGCCGGACTGGGTCTGCTGGTTTTGGTGGTCGTCAC
GACCACGGCCTTTGTAAAGGTATCGGTTGTTCTTTTCCTCGTGCGCAATGCGCTCGGGACTCAGACGATACCACCTAACA
TAGCGCTGTACGCTGTCGCATTGATCCTCACCATGTTTCTTAGCGCGCCCGTTGTTGAACAGACCTATGATCGGATGACC
GATCCGAAGCTACATTATCAGACGTTCGACGACTGGGTAAGCGCCGCCAAATCCGGGAGCGAGCCCCTGCGTGATCATCT
TAAGAAGTTCACAAATGAGGAGCAGCGACAGTTTTTCCTCTCGTCTACCGAAAAAGTCTGGCCAGCGGAAATGCGTGCCA
AAGCCACGGTTGATGATTTGTCCATTCTGGTTCCATCTTTTCTAATTTCAGAGCTAAAGCGCGCGTTTGAGATCGGATTT
CTTCTTTATCTTCCTTTCATCGTTATTGATCTTATTGTGACGACAATTTTGATGGCGATGGGCATGTCTATGGTATCCCC
GACGCTTATATCTGTCCCTTTCAAACTCTTCGTGTTCGTCGCTATTGATGGCTGGTCGAAATTGATGCACGGGCTTGTGT
TGAGTTACACGATACCGGGAGGTTGA

Upstream 100 bases:

>100_bases
CCGGTCGATATACTTGCCAACGGTCAGTGTATCGGGCGTGGCGACATCGTGCGCATTGGAGATACGCTGGGCATCAGGCT
CCGTGGCCGGTTGGGATGCA

Downstream 100 bases:

>100_bases
TTATAGCTGAATCCAGTATTGTCACTCTTATGAGCCAATCGTTGGTGGTATTCATGATCTGGATTCTGCCGCCGCTCATT
GCATCGGTGGTCGTTGGCTT

Product: type III secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MTELQPPILALLAVTAGLGLLVLVVVTTTAFVKVSVVLFLVRNALGTQTIPPNIALYAVALILTMFLSAPVVEQTYDRMT
DPKLHYQTFDDWVSAAKSGSEPLRDHLKKFTNEEQRQFFLSSTEKVWPAEMRAKATVDDLSILVPSFLISELKRAFEIGF
LLYLPFIVIDLIVTTILMAMGMSMVSPTLISVPFKLFVFVAIDGWSKLMHGLVLSYTIPGG

Sequences:

>Translated_221_residues
MTELQPPILALLAVTAGLGLLVLVVVTTTAFVKVSVVLFLVRNALGTQTIPPNIALYAVALILTMFLSAPVVEQTYDRMT
DPKLHYQTFDDWVSAAKSGSEPLRDHLKKFTNEEQRQFFLSSTEKVWPAEMRAKATVDDLSILVPSFLISELKRAFEIGF
LLYLPFIVIDLIVTTILMAMGMSMVSPTLISVPFKLFVFVAIDGWSKLMHGLVLSYTIPGG
>Mature_220_residues
TELQPPILALLAVTAGLGLLVLVVVTTTAFVKVSVVLFLVRNALGTQTIPPNIALYAVALILTMFLSAPVVEQTYDRMTD
PKLHYQTFDDWVSAAKSGSEPLRDHLKKFTNEEQRQFFLSSTEKVWPAEMRAKATVDDLSILVPSFLISELKRAFEIGFL
LYLPFIVIDLIVTTILMAMGMSMVSPTLISVPFKLFVFVAIDGWSKLMHGLVLSYTIPGG

Specific function: Could be involved in the secretion of an unknown factor [H]

COG id: COG4790

COG function: function code U; Type III secretory pathway, component EscR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=199, Percent_Identity=37.6884422110553, Blast_Score=134, Evalue=6e-33,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005838
- InterPro:   IPR005773 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 24438; Mature: 24307

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELQPPILALLAVTAGLGLLVLVVVTTTAFVKVSVVLFLVRNALGTQTIPPNIALYAVA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LILTMFLSAPVVEQTYDRMTDPKLHYQTFDDWVSAAKSGSEPLRDHLKKFTNEEQRQFFL
HHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHH
SSTEKVWPAEMRAKATVDDLSILVPSFLISELKRAFEIGFLLYLPFIVIDLIVTTILMAM
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMSMVSPTLISVPFKLFVFVAIDGWSKLMHGLVLSYTIPGG
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TELQPPILALLAVTAGLGLLVLVVVTTTAFVKVSVVLFLVRNALGTQTIPPNIALYAVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LILTMFLSAPVVEQTYDRMTDPKLHYQTFDDWVSAAKSGSEPLRDHLKKFTNEEQRQFFL
HHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHH
SSTEKVWPAEMRAKATVDDLSILVPSFLISELKRAFEIGFLLYLPFIVIDLIVTTILMAM
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMSMVSPTLISVPFKLFVFVAIDGWSKLMHGLVLSYTIPGG
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]