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The map label for this gene is 13475306

Identifier: 13475306

GI number: 13475306

Start: 5161114

End: 5161362

Strand: Direct

Name: 13475306

Synonym: msr8694

Alternate gene names: NA

Gene position: 5161114-5161362 (Clockwise)

Preceding gene: 13475305

Following gene: 13475307

Centisome position: 73.35

GC content: 51.81

Gene sequence:

>249_bases
ATGAGCCAATCGTTGGTGGTATTCATGATCTGGATTCTGCCGCCGCTCATTGCATCGGTGGTCGTTGGCTTGGTCATTGG
CATCATCCAGGCGGCAACACAGATCCAGGATGAAAGTTTGCCACTAACCGTCAAGCTTCTGGTTGTTGTCGCGGTTATTG
GTTTGTTTGCTCCTGTGCTGAGCGCCCCGCTGATAGAGCTAACCGACCAGATCTTTACCGAGTTTCCCGCCATGACACTT
AGCTACTAG

Upstream 100 bases:

>100_bases
TCGTCGCTATTGATGGCTGGTCGAAATTGATGCACGGGCTTGTGTTGAGTTACACGATACCGGGAGGTTGATTATAGCTG
AATCCAGTATTGTCACTCTT

Downstream 100 bases:

>100_bases
TCTCCGCCATGTATGCGTCACCGGCCGAGATTCAGATCCTCATGCATACGGCTATCGAACTCGTCGTAGCAGCCGGTCTT
GGCGCAGCGCGCGCGATAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 81

Protein sequence:

>82_residues
MSQSLVVFMIWILPPLIASVVVGLVIGIIQAATQIQDESLPLTVKLLVVVAVIGLFAPVLSAPLIELTDQIFTEFPAMTL
SY

Sequences:

>Translated_82_residues
MSQSLVVFMIWILPPLIASVVVGLVIGIIQAATQIQDESLPLTVKLLVVVAVIGLFAPVLSAPLIELTDQIFTEFPAMTL
SY
>Mature_81_residues
SQSLVVFMIWILPPLIASVVVGLVIGIIQAATQIQDESLPLTVKLLVVVAVIGLFAPVLSAPLIELTDQIFTEFPAMTLS
Y

Specific function: Could be involved in the secretion of an unknown factor [H]

COG id: COG4794

COG function: function code U; Type III secretory pathway, component EscS

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliQ/MopD/SpaQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002191 [H]

Pfam domain/function: PF01313 Bac_export_3 [H]

EC number: NA

Molecular weight: Translated: 8808; Mature: 8677

Theoretical pI: Translated: 3.64; Mature: 3.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSLVVFMIWILPPLIASVVVGLVIGIIQAATQIQDESLPLTVKLLVVVAVIGLFAPVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
SAPLIELTDQIFTEFPAMTLSY
HCHHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure 
SQSLVVFMIWILPPLIASVVVGLVIGIIQAATQIQDESLPLTVKLLVVVAVIGLFAPVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
SAPLIELTDQIFTEFPAMTLSY
HCHHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]