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The map label for this gene is nolT [H]

Identifier: 13475299

GI number: 13475299

Start: 5155371

End: 5156210

Strand: Direct

Name: nolT [H]

Synonym: mlr6339

Alternate gene names: 13475299

Gene position: 5155371-5156210 (Clockwise)

Preceding gene: 13475298

Following gene: 13475300

Centisome position: 73.27

GC content: 58.81

Gene sequence:

>840_bases
ATGCCTGGCACGTGCGGTCGGAGGTCACTTCGCCTTATCGTGCTGCCACTCCTCGTGGCCCTCGGCGGTTGCAAGGTGGA
TCTCTACACGCAACTGCAGGAGCGCGAGGCGAATGAAATGCTCGCCCTTCTGATGGACAACGGAGTTCATGCGGTTCGGG
TCGCTGCCAAGGATGGGACTAGCACGGTCCAGGTTGACGAAAAGCTGCTCGCTTACTCAATCGACCTCCTGAATGGCAAG
GGATTGCCGCGCCAGTCATTCAAGAACCTCGGAGAGATTTTCCAAGGATCAGGCCTCATTGCCTCGCCGACCGAGGAACG
TGCCCGTTATGTTTATGCGCTCAGCGAAGAGTTGTCCCGCACGATCAGCGATATCGATGGCGTATTCTCTGTACGTGTCC
ACGTAGTTCTGCCGCATAACGACCTTTTGCGAGCAGGCGCCACGCCATCCTCGGCTTCGGTCTTTATCAGGCACGACGCC
AAAGCAGATCTCTCGGTTCTGCTGCCGAAGATAAAGATGCTCGTGGCCGACAGCATCGAAGGGTTGTCCTACGACAAGGT
CGAAGTGGTTTTGGTGTCGGTGGAGCGTTCCGCGCCTGAGCAACGGTCCGTGCCGGCGACTGTTTTGGCCCAAGCGTCCA
GGCCCGTTCCAGCGCCACTTTTGGCCAGCTTAACCGGTATTGCCGCAGCTGTGTTCGCAGTGGCGTGCTATCTCTTAGTC
ACCGGTCTTAGCCGCCGGCGCAAGCAGTCAGCGGGCGAAGTTCCCAAGCTCGAGCGGCGGTCGGGTGTTTCCGCACTCGA
TGCCATTCGCAAAAAGACACCGGCGATAGCGCCTCAGTGA

Upstream 100 bases:

>100_bases
TGCGCTTGTTTCCAAAGGTGTCAGCGGCATCACCTCATCTGTAAATAAACTTCTAAAGGAAGGCTGAACCGCGCACATGA
TTGGCTTAGCCCAGGAAATC

Downstream 100 bases:

>100_bases
CATGTCAATGCCAATGCCGATACTGACCGCCCAACCTGATGGTTCGTTCCAATTGCCTTCCTTGGGTCGGAGCGAGCTTG
CTGCTTCGGCCCATCCTACC

Product: nodulation protein NOLT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MPGTCGRRSLRLIVLPLLVALGGCKVDLYTQLQEREANEMLALLMDNGVHAVRVAAKDGTSTVQVDEKLLAYSIDLLNGK
GLPRQSFKNLGEIFQGSGLIASPTEERARYVYALSEELSRTISDIDGVFSVRVHVVLPHNDLLRAGATPSSASVFIRHDA
KADLSVLLPKIKMLVADSIEGLSYDKVEVVLVSVERSAPEQRSVPATVLAQASRPVPAPLLASLTGIAAAVFAVACYLLV
TGLSRRRKQSAGEVPKLERRSGVSALDAIRKKTPAIAPQ

Sequences:

>Translated_279_residues
MPGTCGRRSLRLIVLPLLVALGGCKVDLYTQLQEREANEMLALLMDNGVHAVRVAAKDGTSTVQVDEKLLAYSIDLLNGK
GLPRQSFKNLGEIFQGSGLIASPTEERARYVYALSEELSRTISDIDGVFSVRVHVVLPHNDLLRAGATPSSASVFIRHDA
KADLSVLLPKIKMLVADSIEGLSYDKVEVVLVSVERSAPEQRSVPATVLAQASRPVPAPLLASLTGIAAAVFAVACYLLV
TGLSRRRKQSAGEVPKLERRSGVSALDAIRKKTPAIAPQ
>Mature_278_residues
PGTCGRRSLRLIVLPLLVALGGCKVDLYTQLQEREANEMLALLMDNGVHAVRVAAKDGTSTVQVDEKLLAYSIDLLNGKG
LPRQSFKNLGEIFQGSGLIASPTEERARYVYALSEELSRTISDIDGVFSVRVHVVLPHNDLLRAGATPSSASVFIRHDAK
ADLSVLLPKIKMLVADSIEGLSYDKVEVVLVSVERSAPEQRSVPATVLAQASRPVPAPLLASLTGIAAAVFAVACYLLVT
GLSRRRKQSAGEVPKLERRSGVSALDAIRKKTPAIAPQ

Specific function: Regulates cultivar-specific nodulation of soybean [H]

COG id: COG4669

COG function: function code U; Type III secretory pathway, lipoprotein EscJ

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yscJ lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003282
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF [H]

EC number: NA

Molecular weight: Translated: 29898; Mature: 29767

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGTCGRRSLRLIVLPLLVALGGCKVDLYTQLQEREANEMLALLMDNGVHAVRVAAKDGT
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
STVQVDEKLLAYSIDLLNGKGLPRQSFKNLGEIFQGSGLIASPTEERARYVYALSEELSR
CEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHH
TISDIDGVFSVRVHVVLPHNDLLRAGATPSSASVFIRHDAKADLSVLLPKIKMLVADSIE
HHHHHCCEEEEEEEEEECCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCC
GLSYDKVEVVLVSVERSAPEQRSVPATVLAQASRPVPAPLLASLTGIAAAVFAVACYLLV
CCCCCCEEEEEEEECCCCCHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
TGLSRRRKQSAGEVPKLERRSGVSALDAIRKKTPAIAPQ
HHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PGTCGRRSLRLIVLPLLVALGGCKVDLYTQLQEREANEMLALLMDNGVHAVRVAAKDGT
CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
STVQVDEKLLAYSIDLLNGKGLPRQSFKNLGEIFQGSGLIASPTEERARYVYALSEELSR
CEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHH
TISDIDGVFSVRVHVVLPHNDLLRAGATPSSASVFIRHDAKADLSVLLPKIKMLVADSIE
HHHHHCCEEEEEEEEEECCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCC
GLSYDKVEVVLVSVERSAPEQRSVPATVLAQASRPVPAPLLASLTGIAAAVFAVACYLLV
CCCCCCEEEEEEEECCCCCHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
TGLSRRRKQSAGEVPKLERRSGVSALDAIRKKTPAIAPQ
HHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8412662 [H]