Click here to switch to the map view.

The map label for this gene is nolU [H]

Identifier: 13475300

GI number: 13475300

Start: 5156212

End: 5156850

Strand: Direct

Name: nolU [H]

Synonym: mlr8764

Alternate gene names: 13475300

Gene position: 5156212-5156850 (Clockwise)

Preceding gene: 13475299

Following gene: 13475301

Centisome position: 73.28

GC content: 57.12

Gene sequence:

>639_bases
ATGTCAATGCCAATGCCGATACTGACCGCCCAACCTGATGGTTCGTTCCAATTGCCTTCCTTGGGTCGGAGCGAGCTTGC
TGCTTCGGCCCATCCTACCCGTCTTGGCGCGCGTCTTGATCCGGCGTTATCGGCTGCTACGTTGGCTCAGTTGCAGAAGT
GTCCCAGACTGCAGCGAAGACTAACAGAATTGTTACTCGACAATGATTCGAAGTCGAATGATGTTGAGCGGGGGCTGGAC
CTTCTGCGCGGTAATGATCCGCTTCGGGCTGCCCTCCTTGCAGGTAGTGCATGGCATGCCCGATCGCTGCTTAAGCTTGT
CTCTCAGCCTGACCTCACAGTGCTCATTCAACGTATCGGCGCTGATGCCCATGCGTTTGGAATCCGACATCTGGCGCATG
CCATTGCGGACAGATTGATCGCGGATCCGGGAAAACTCGCGCACCAAATTGAACACGATGGACACGCCTGTCTTGGTGCC
TGGCTCCATCACAGTCCAGTGATGGAGCGCAACCGCGTGCTCCTACGCTTGCCTGTAGGAACCGCCGCCGACAATCCAGA
GCCTAAGCACGGGAACGCCGCAGGCCAGTTGTTGTCGCTTGTGGTACGCCATTTTGAGGCGGAGAACCCGCCGATATGA

Upstream 100 bases:

>100_bases
AAGCAGTCAGCGGGCGAAGTTCCCAAGCTCGAGCGGCGGTCGGGTGTTTCCGCACTCGATGCCATTCGCAAAAAGACACC
GGCGATAGCGCCTCAGTGAC

Downstream 100 bases:

>100_bases
CAGCCGATATTTCCGTGGCGCCGGCAGCGCCGCAGATGCGCCCTTTGGGGCCACTGATACCGGCGAGCGAGCTCGAAATC
TGGGATAATGCCGCAAAAGC

Product: nodulation protein NOLU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MSMPMPILTAQPDGSFQLPSLGRSELAASAHPTRLGARLDPALSAATLAQLQKCPRLQRRLTELLLDNDSKSNDVERGLD
LLRGNDPLRAALLAGSAWHARSLLKLVSQPDLTVLIQRIGADAHAFGIRHLAHAIADRLIADPGKLAHQIEHDGHACLGA
WLHHSPVMERNRVLLRLPVGTAADNPEPKHGNAAGQLLSLVVRHFEAENPPI

Sequences:

>Translated_212_residues
MSMPMPILTAQPDGSFQLPSLGRSELAASAHPTRLGARLDPALSAATLAQLQKCPRLQRRLTELLLDNDSKSNDVERGLD
LLRGNDPLRAALLAGSAWHARSLLKLVSQPDLTVLIQRIGADAHAFGIRHLAHAIADRLIADPGKLAHQIEHDGHACLGA
WLHHSPVMERNRVLLRLPVGTAADNPEPKHGNAAGQLLSLVVRHFEAENPPI
>Mature_211_residues
SMPMPILTAQPDGSFQLPSLGRSELAASAHPTRLGARLDPALSAATLAQLQKCPRLQRRLTELLLDNDSKSNDVERGLDL
LRGNDPLRAALLAGSAWHARSLLKLVSQPDLTVLIQRIGADAHAFGIRHLAHAIADRLIADPGKLAHQIEHDGHACLGAW
LHHSPVMERNRVLLRLPVGTAADNPEPKHGNAAGQLLSLVVRHFEAENPPI

Specific function: Regulates cultivar-specific nodulation of soybean [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22911; Mature: 22779

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMPMPILTAQPDGSFQLPSLGRSELAASAHPTRLGARLDPALSAATLAQLQKCPRLQRR
CCCCCCEEEECCCCCEECCCCCHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LTELLLDNDSKSNDVERGLDLLRGNDPLRAALLAGSAWHARSLLKLVSQPDLTVLIQRIG
HHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHC
ADAHAFGIRHLAHAIADRLIADPGKLAHQIEHDGHACLGAWLHHSPVMERNRVLLRLPVG
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCHHCCCCEEEEECCC
TAADNPEPKHGNAAGQLLSLVVRHFEAENPPI
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SMPMPILTAQPDGSFQLPSLGRSELAASAHPTRLGARLDPALSAATLAQLQKCPRLQRR
CCCCCEEEECCCCCEECCCCCHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LTELLLDNDSKSNDVERGLDLLRGNDPLRAALLAGSAWHARSLLKLVSQPDLTVLIQRIG
HHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHC
ADAHAFGIRHLAHAIADRLIADPGKLAHQIEHDGHACLGAWLHHSPVMERNRVLLRLPVG
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCHHCCCCEEEEECCC
TAADNPEPKHGNAAGQLLSLVVRHFEAENPPI
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8412662 [H]