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The map label for this gene is 13475266

Identifier: 13475266

GI number: 13475266

Start: 5113564

End: 5114787

Strand: Direct

Name: 13475266

Synonym: mlr6296

Alternate gene names: NA

Gene position: 5113564-5114787 (Clockwise)

Preceding gene: 13475265

Following gene: 13475267

Centisome position: 72.68

GC content: 57.11

Gene sequence:

>1224_bases
ATGGCCAAAAGAGCGCTTATCCTGGTTGAAGGCTCGAGGACTGGTCTGCTGTACGTCCAAGCGGCCCAGCGGCTTGGCCT
TTCTCCAATTACTCTGTCGGCTGATCCGACGCAGTACGACTACATTGCGGCGGAAGGGATTGAGGCAATTCATGTCGATA
CAGCCGATCTCGATGCTTTGATCGGCGAATGTTCCCGGCTGCGTGCGACCTATGAGATTGCCGGAATTACGTGCGCCAAG
GAGTCGGTCTATGCGACGGTTGCCAAGCTTTGCCGGCATTTCGATCTACCGGGACCAAACCCTACATCGATTGAACGATG
TTGCGACAAATTCACCCAACGTCAACTCCTCGCGGAGGCCGGCGTTCCAGTACCGTCGTATCGCTTGGCAGCGAATGCGG
CGGACATAGAAAGCTATGCCGCTGAAATCGGGCTGCCGGTAATTCTTAAGCCAGCCGTGGGTGTCGGCAGCAGCGGTGTC
CGATTATGCCGCAACGGCGATGAGTTGGCCGAACACACGACCTATCTGTTGGGCGGGAAGCACATATGGCGATCTTCGCC
GCGGATACTGGTCGAAGAATTCGCACAAGGCCCATACTATAGCACCGAGATAATGGGAGATGAGGTCATCGGGATTTACG
CCGGTGAGTTCGGCCCCGAACCGTATTTCGTGTTTCGTGAATTCACCCTGCCGGCCCTACTGACTGACGAAGAGCAAGAG
CGTATCGTCGACGTTTCGCTGGGGTGTTTGCGCGCTCTCGGCCTTGGCTGGGGGCCAACCTGCATAGAATTCCGATGGAC
GAAGCGTGGCCCAGTCGTCATTGAAGTTAATCCACGTCTTGGTGGCGCGCCCGGTCCTCAACTGGTTCAGCTAACTTACG
GGCTCGACCTTGTCACCGAGCACATCAAGCTTGTCATCGGCGAGAAATGGGATTTGCGCAGAAGGCACTCGCACACGGCC
GCCGCGCGAATCCTAGTTCCTGATCGCGATGGCACCCTTGATTGGATCGACGGCGACAATCGGGCAACTGCTGTACCAGG
CGTCGCCGAGGTCGAATTCTACATTGGACCCAATACGCCGATCGTCAGGAAAGGCGATCACCGGGACTGGATCGGCCATG
TTATCGTCGCCTCACCCAGTCGTGCGCTAACCGAAGCGACACTTCACCGGGCCGTCGATCTGATCGATTGGTCGATCGCA
CCATTTCCGACTCTTGGCGAATAG

Upstream 100 bases:

>100_bases
ATAGCTTCACGACAAGGTCTGAGATTAGGCGCGTCCAAAAGGGCTGACGTCGATTTGCGCTTCGACTGACGCACAGCATG
CAACTCGGGATCGAAAGCTG

Downstream 100 bases:

>100_bases
AAATTATCAGCGGCCCTCACCTTTCCGACCAGGGCAAGGCGGCGCCAGATTGGAAGGTGATCGTCATCCGAAACGTTGAT
GCAATTGAGAGCACGAAAGA

Product: putative carboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MAKRALILVEGSRTGLLYVQAAQRLGLSPITLSADPTQYDYIAAEGIEAIHVDTADLDALIGECSRLRATYEIAGITCAK
ESVYATVAKLCRHFDLPGPNPTSIERCCDKFTQRQLLAEAGVPVPSYRLAANAADIESYAAEIGLPVILKPAVGVGSSGV
RLCRNGDELAEHTTYLLGGKHIWRSSPRILVEEFAQGPYYSTEIMGDEVIGIYAGEFGPEPYFVFREFTLPALLTDEEQE
RIVDVSLGCLRALGLGWGPTCIEFRWTKRGPVVIEVNPRLGGAPGPQLVQLTYGLDLVTEHIKLVIGEKWDLRRRHSHTA
AARILVPDRDGTLDWIDGDNRATAVPGVAEVEFYIGPNTPIVRKGDHRDWIGHVIVASPSRALTEATLHRAVDLIDWSIA
PFPTLGE

Sequences:

>Translated_407_residues
MAKRALILVEGSRTGLLYVQAAQRLGLSPITLSADPTQYDYIAAEGIEAIHVDTADLDALIGECSRLRATYEIAGITCAK
ESVYATVAKLCRHFDLPGPNPTSIERCCDKFTQRQLLAEAGVPVPSYRLAANAADIESYAAEIGLPVILKPAVGVGSSGV
RLCRNGDELAEHTTYLLGGKHIWRSSPRILVEEFAQGPYYSTEIMGDEVIGIYAGEFGPEPYFVFREFTLPALLTDEEQE
RIVDVSLGCLRALGLGWGPTCIEFRWTKRGPVVIEVNPRLGGAPGPQLVQLTYGLDLVTEHIKLVIGEKWDLRRRHSHTA
AARILVPDRDGTLDWIDGDNRATAVPGVAEVEFYIGPNTPIVRKGDHRDWIGHVIVASPSRALTEATLHRAVDLIDWSIA
PFPTLGE
>Mature_406_residues
AKRALILVEGSRTGLLYVQAAQRLGLSPITLSADPTQYDYIAAEGIEAIHVDTADLDALIGECSRLRATYEIAGITCAKE
SVYATVAKLCRHFDLPGPNPTSIERCCDKFTQRQLLAEAGVPVPSYRLAANAADIESYAAEIGLPVILKPAVGVGSSGVR
LCRNGDELAEHTTYLLGGKHIWRSSPRILVEEFAQGPYYSTEIMGDEVIGIYAGEFGPEPYFVFREFTLPALLTDEEQER
IVDVSLGCLRALGLGWGPTCIEFRWTKRGPVVIEVNPRLGGAPGPQLVQLTYGLDLVTEHIKLVIGEKWDLRRRHSHTAA
ARILVPDRDGTLDWIDGDNRATAVPGVAEVEFYIGPNTPIVRKGDHRDWIGHVIVASPSRALTEATLHRAVDLIDWSIAP
FPTLGE

Specific function: Unknown

COG id: COG0439

COG function: function code I; Biotin carboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

Organism=Homo sapiens, GI148839342, Length=340, Percent_Identity=25, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI261245046, Length=340, Percent_Identity=25, Blast_Score=83, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR005479 [H]

Pfam domain/function: PF02786 CPSase_L_D2 [H]

EC number: NA

Molecular weight: Translated: 44473; Mature: 44342

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS50975 ATP_GRASP ; PS00867 CPSASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRALILVEGSRTGLLYVQAAQRLGLSPITLSADPTQYDYIAAEGIEAIHVDTADLDAL
CCCEEEEEEECCCCCEEEEEEHHHCCCCEEEECCCCCCCEEEHHCCCEEEEECHHHHHHH
IGECSRLRATYEIAGITCAKESVYATVAKLCRHFDLPGPNPTSIERCCDKFTQRQLLAEA
HHHHHHHEEEEEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHC
GVPVPSYRLAANAADIESYAAEIGLPVILKPAVGVGSSGVRLCRNGDELAEHTTYLLGGK
CCCCCCEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHCCCHHHHHHHEEEECCH
HIWRSSPRILVEEFAQGPYYSTEIMGDEVIGIYAGEFGPEPYFVFREFTLPALLTDEEQE
HHHCCCCHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCEEEEEEECCCEEECCCHHH
RIVDVSLGCLRALGLGWGPTCIEFRWTKRGPVVIEVNPRLGGAPGPQLVQLTYGLDLVTE
HEEHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEEECCHHHHHH
HIKLVIGEKWDLRRRHSHTAAARILVPDRDGTLDWIDGDNRATAVPGVAEVEFYIGPNTP
HHHEEECCCCCHHHHCCCCEEEEEEEECCCCCEEEECCCCCEEECCCEEEEEEEECCCCC
IVRKGDHRDWIGHVIVASPSRALTEATLHRAVDLIDWSIAPFPTLGE
EEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
AKRALILVEGSRTGLLYVQAAQRLGLSPITLSADPTQYDYIAAEGIEAIHVDTADLDAL
CCEEEEEEECCCCCEEEEEEHHHCCCCEEEECCCCCCCEEEHHCCCEEEEECHHHHHHH
IGECSRLRATYEIAGITCAKESVYATVAKLCRHFDLPGPNPTSIERCCDKFTQRQLLAEA
HHHHHHHEEEEEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHC
GVPVPSYRLAANAADIESYAAEIGLPVILKPAVGVGSSGVRLCRNGDELAEHTTYLLGGK
CCCCCCEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHCCCHHHHHHHEEEECCH
HIWRSSPRILVEEFAQGPYYSTEIMGDEVIGIYAGEFGPEPYFVFREFTLPALLTDEEQE
HHHCCCCHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCEEEEEEECCCEEECCCHHH
RIVDVSLGCLRALGLGWGPTCIEFRWTKRGPVVIEVNPRLGGAPGPQLVQLTYGLDLVTE
HEEHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEEECCHHHHHH
HIKLVIGEKWDLRRRHSHTAAARILVPDRDGTLDWIDGDNRATAVPGVAEVEFYIGPNTP
HHHEEECCCCCHHHHCCCCEEEEEEEECCCCCEEEECCCCCEEECCCEEEEEEEECCCCC
IVRKGDHRDWIGHVIVASPSRALTEATLHRAVDLIDWSIAPFPTLGE
EEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]