Click here to switch to the map view.

The map label for this gene is 13475265

Identifier: 13475265

GI number: 13475265

Start: 5111256

End: 5112833

Strand: Direct

Name: 13475265

Synonym: mlr6294

Alternate gene names: NA

Gene position: 5111256-5112833 (Clockwise)

Preceding gene: 13475264

Following gene: 13475266

Centisome position: 72.64

GC content: 56.15

Gene sequence:

>1578_bases
ATGGTTCATTCAACGCCGACAACCTTCGCCGGCTCCAAATCGGCTCGCCCACGAGTAGCCATTGCTGGTTTTCAACACGA
AACCAACACGTTCGCACCGTTCGGCGCACCATTTGATGATTTTGTTCGGGGCGGCGGCTGGCCCGCTATGACTACCGGTG
CGGCCATTCTCGATGTCTTTCCTCCGATTGAAATTCCCATCGGAGGGTTCATCAGCGCTGCGAAGGATACGTATGAGTTG
ATACCTTTGGTCTGGGCTGCTGCGGAACCAACCAGCTTCGTCTCCGATGACGCCTTTGAGCGAATTGCAGGAATGATTTG
TGATGGGATCGCCCGCGCAGGTCCTCTCGATGCGATCTATCTCGACCTGCATGGCGCGATGGTCGTTGAATCTTATCAGG
ACGGGGAAGGGGAACTGTTAAGGCGCGTGCGAGAAATCGTCGGCCGAGATATTCCCATCATGATCAGCTTGGACTTTCAT
GCCAATGTCACCGAGGCCATGGTCGAGCTCTCCGACGGTATTACAATTTTCCGCACTTACCCTCACATAGACCTGGCTGA
CACAGGCGGACGCGCCTTCAGTTTACTGGAGCAGCGCATTCGCCGCGGGAGGCCCTTCATCAAGGCGTTCAGGAAGACTC
CATTTCTGATCCCGCTACCTGCCCAGTGTACTGATCTAGAGCCATGCATGTCTCTTTATGCTGGGCTGCAAGAACGAGTC
AAAGGACCAGTTCTGAACGTGGACGTCGCGCTGGGCTTTCCGTTGGCAGATATTCGCGAATGCGGGCCGGCAGTTGTCGC
TTATGGGATCGACGAGGTAGCGGTCACAGCGGCGGCAGATATGCAACTAAGCGACATGCTGGAGGCCGAAGGACGATTCC
ATATGTCGCTCCTTGATGTAAAGGAAGCTGTCGAACATGCTGCGCGCAACGGGCGCAAAGGCTCGCTCATAGTCCTTGCC
GATGTGCAGGATAATCCCGGCTGTGGGGGTACGTCAGACACCATTGGGCTTCTCAAAGGTATGGTCGAGGGCGGCCTTCG
AAATGGCGTACTTGGCCTGCTTTGGGATCCAGAAACGGCTGAAGCAGCCCACACCGCAGGTCTAGGCGCTGAACTCGATG
TGCGGCTTGGTGGACGCTATGGTTACGATTCGGAACCATATCTTGCCAGGGTTCGTGTGGAAGCACTTTCCGACGGGGTG
TTCAAGGCTAATGGGCCATGCCTAGGCGGTGTGCAAGTAGATCTTGGCCGCATGGCGCGCTTGCTTATCCTTAACCCTGG
ATCCAGCGTGCAGGTCGTCGTATCAAGTGTCCGCTTTCAGTGTCTCGATCAGGATCTGCTACGGGCGGTTGGGGTAGAGC
CGAGAGACCAGTCGGTTGTGGCAGTCAAAAGCGCAGTTCACTTCCGGGCCGACTTTGCACCTATCGCCGAAGAGATACTT
ACGGTGGAATCCCCTGGAGCGCATTGGTGCCGGAATGATATCCTTGACTATAAGAACCTGCGCGATGGCGTACGCAGGAT
GCCGATCTCGCTAGCTACGCAGCCGAGTGAGGTCAAGATTGCCGAGAGGCGACACTAA

Upstream 100 bases:

>100_bases
GGATCGTAGGAAAATCGGGGCGTCGCAATGATCCGATCGCGACGTCCGCTCGAAGGGTGGCTCGTTCGGAAGACGGCAAC
TGAAGTTCAAAGGTCAAGAT

Downstream 100 bases:

>100_bases
CAGCGCTTGGATCGGGGCTCGCCAAATCAGTCCCATTGGAGAAAATGGCCGACCGTACGGACGCTGTGTCAGCCTGAAGC
GTTGGACTCGCCCCATGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: MlrC Domain-Containing Protein; MlrC Domain Protein; MlrC Family; Microcystin LR Degradation Protein MlrC; MlrC-Like; MlrC C-Terminus Family; MlrC Family Protein; Peptidase; MlrC C-Terminal Domain Family Protein; MlrC-Like Protein; Cytoplasmic Protein; Microcystin Lr Degradation Protein Mlrc-Like Protein; MlrC C-Terminus Family Protein; LOW QUALITY PROTEIN MlrC C-Terminus Superfamily Protein; Microcystin Lr Degradation Domain; MlrC C-Terminus Superfamily Protein

Number of amino acids: Translated: 525; Mature: 525

Protein sequence:

>525_residues
MVHSTPTTFAGSKSARPRVAIAGFQHETNTFAPFGAPFDDFVRGGGWPAMTTGAAILDVFPPIEIPIGGFISAAKDTYEL
IPLVWAAAEPTSFVSDDAFERIAGMICDGIARAGPLDAIYLDLHGAMVVESYQDGEGELLRRVREIVGRDIPIMISLDFH
ANVTEAMVELSDGITIFRTYPHIDLADTGGRAFSLLEQRIRRGRPFIKAFRKTPFLIPLPAQCTDLEPCMSLYAGLQERV
KGPVLNVDVALGFPLADIRECGPAVVAYGIDEVAVTAAADMQLSDMLEAEGRFHMSLLDVKEAVEHAARNGRKGSLIVLA
DVQDNPGCGGTSDTIGLLKGMVEGGLRNGVLGLLWDPETAEAAHTAGLGAELDVRLGGRYGYDSEPYLARVRVEALSDGV
FKANGPCLGGVQVDLGRMARLLILNPGSSVQVVVSSVRFQCLDQDLLRAVGVEPRDQSVVAVKSAVHFRADFAPIAEEIL
TVESPGAHWCRNDILDYKNLRDGVRRMPISLATQPSEVKIAERRH

Sequences:

>Translated_525_residues
MVHSTPTTFAGSKSARPRVAIAGFQHETNTFAPFGAPFDDFVRGGGWPAMTTGAAILDVFPPIEIPIGGFISAAKDTYEL
IPLVWAAAEPTSFVSDDAFERIAGMICDGIARAGPLDAIYLDLHGAMVVESYQDGEGELLRRVREIVGRDIPIMISLDFH
ANVTEAMVELSDGITIFRTYPHIDLADTGGRAFSLLEQRIRRGRPFIKAFRKTPFLIPLPAQCTDLEPCMSLYAGLQERV
KGPVLNVDVALGFPLADIRECGPAVVAYGIDEVAVTAAADMQLSDMLEAEGRFHMSLLDVKEAVEHAARNGRKGSLIVLA
DVQDNPGCGGTSDTIGLLKGMVEGGLRNGVLGLLWDPETAEAAHTAGLGAELDVRLGGRYGYDSEPYLARVRVEALSDGV
FKANGPCLGGVQVDLGRMARLLILNPGSSVQVVVSSVRFQCLDQDLLRAVGVEPRDQSVVAVKSAVHFRADFAPIAEEIL
TVESPGAHWCRNDILDYKNLRDGVRRMPISLATQPSEVKIAERRH
>Mature_525_residues
MVHSTPTTFAGSKSARPRVAIAGFQHETNTFAPFGAPFDDFVRGGGWPAMTTGAAILDVFPPIEIPIGGFISAAKDTYEL
IPLVWAAAEPTSFVSDDAFERIAGMICDGIARAGPLDAIYLDLHGAMVVESYQDGEGELLRRVREIVGRDIPIMISLDFH
ANVTEAMVELSDGITIFRTYPHIDLADTGGRAFSLLEQRIRRGRPFIKAFRKTPFLIPLPAQCTDLEPCMSLYAGLQERV
KGPVLNVDVALGFPLADIRECGPAVVAYGIDEVAVTAAADMQLSDMLEAEGRFHMSLLDVKEAVEHAARNGRKGSLIVLA
DVQDNPGCGGTSDTIGLLKGMVEGGLRNGVLGLLWDPETAEAAHTAGLGAELDVRLGGRYGYDSEPYLARVRVEALSDGV
FKANGPCLGGVQVDLGRMARLLILNPGSSVQVVVSSVRFQCLDQDLLRAVGVEPRDQSVVAVKSAVHFRADFAPIAEEIL
TVESPGAHWCRNDILDYKNLRDGVRRMPISLATQPSEVKIAERRH

Specific function: Unknown

COG id: COG5476

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56599; Mature: 56599

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHSTPTTFAGSKSARPRVAIAGFQHETNTFAPFGAPFDDFVRGGGWPAMTTGAAILDVF
CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCHHCCCHHHHCC
PPIEIPIGGFISAAKDTYELIPLVWAAAEPTSFVSDDAFERIAGMICDGIARAGPLDAIY
CCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEE
LDLHGAMVVESYQDGEGELLRRVREIVGRDIPIMISLDFHANVTEAMVELSDGITIFRTY
EEECCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCEEEEEEC
PHIDLADTGGRAFSLLEQRIRRGRPFIKAFRKTPFLIPLPAQCTDLEPCMSLYAGLQERV
CCEEEECCCCHHHHHHHHHHHCCCHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHH
KGPVLNVDVALGFPLADIRECGPAVVAYGIDEVAVTAAADMQLSDMLEAEGRFHMSLLDV
CCCEEEEEEEECCCHHHHHHCCCEEEEECCHHHHEEHHCCCHHHHHHHHCCCEEHHHHHH
KEAVEHAARNGRKGSLIVLADVQDNPGCGGTSDTIGLLKGMVEGGLRNGVLGLLWDPETA
HHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHCCEEEEEECCCHH
EAAHTAGLGAELDVRLGGRYGYDSEPYLARVRVEALSDGVFKANGPCLGGVQVDLGRMAR
HHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEHHHHCCCCEECCCCEECCEEECCCCCEE
LLILNPGSSVQVVVSSVRFQCLDQDLLRAVGVEPRDQSVVAVKSAVHFRADFAPIAEEIL
EEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHCCHHHHHHHHE
TVESPGAHWCRNDILDYKNLRDGVRRMPISLATQPSEVKIAERRH
ECCCCCCHHHHHHHCCHHHHHHHHHHCCCEECCCCCCCCHHCCCC
>Mature Secondary Structure
MVHSTPTTFAGSKSARPRVAIAGFQHETNTFAPFGAPFDDFVRGGGWPAMTTGAAILDVF
CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCHHCCCHHHHCC
PPIEIPIGGFISAAKDTYELIPLVWAAAEPTSFVSDDAFERIAGMICDGIARAGPLDAIY
CCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEE
LDLHGAMVVESYQDGEGELLRRVREIVGRDIPIMISLDFHANVTEAMVELSDGITIFRTY
EEECCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCEEEEEEC
PHIDLADTGGRAFSLLEQRIRRGRPFIKAFRKTPFLIPLPAQCTDLEPCMSLYAGLQERV
CCEEEECCCCHHHHHHHHHHHCCCHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHH
KGPVLNVDVALGFPLADIRECGPAVVAYGIDEVAVTAAADMQLSDMLEAEGRFHMSLLDV
CCCEEEEEEEECCCHHHHHHCCCEEEEECCHHHHEEHHCCCHHHHHHHHCCCEEHHHHHH
KEAVEHAARNGRKGSLIVLADVQDNPGCGGTSDTIGLLKGMVEGGLRNGVLGLLWDPETA
HHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHCCEEEEEECCCHH
EAAHTAGLGAELDVRLGGRYGYDSEPYLARVRVEALSDGVFKANGPCLGGVQVDLGRMAR
HHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEHHHHCCCCEECCCCEECCEEECCCCCEE
LLILNPGSSVQVVVSSVRFQCLDQDLLRAVGVEPRDQSVVAVKSAVHFRADFAPIAEEIL
EEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHCCHHHHHHHHE
TVESPGAHWCRNDILDYKNLRDGVRRMPISLATQPSEVKIAERRH
ECCCCCCHHHHHHHCCHHHHHHHHHHCCCEECCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA