| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475256
Identifier: 13475256
GI number: 13475256
Start: 5099683
End: 5101329
Strand: Reverse
Name: 13475256
Synonym: mll6284
Alternate gene names: NA
Gene position: 5101329-5099683 (Counterclockwise)
Preceding gene: 13475257
Following gene: 13475252
Centisome position: 72.5
GC content: 62.05
Gene sequence:
>1647_bases GTGGCGTGCACAAATCAGGAAGCAACTTCGCCCGCGGCGTTTGCGCCGCTCAGGAATTCGACCTTTCGTTCGATCTGGCT CGCCATACAGGTTGCCAACCTCGGCTGGTTGATGCAGGCCGTTGCCATCAGCTGGCTGATGGCAACGATCTCGACGTCCG ATGTGATGGTTGCGCTGGTGCAGGCGTCAGCGACTCTACCTGCGTTCATATTGTCTGTCTTCGTCGGGGCCATCGCCGAC AACTTCAGCCGTCGCAGGGTCATGTTCGCCGGTTGGTGCCTTATGGCTATAGCATCTGCGATGCTGGCTACTTCCGTGGC GCTCGGCTTTGTCGCCCCATGGATGATCCTCGGCTTCAGCTTCCTGATCGCGTGCGGCAGCGCGGTCAACGATCCCGCTT GGCAAGCGTCGGTTGGCGATATCGTCGACCGACGCGACGTTCCCGCCGCGGTCACCCTCCTCACCGTCGGCTTCAACACT GTCCGGACCGTAGGCCCGGCGCTTGGCGGCCTCGTCGTTGCCTCGTTCGGGCTTGTGACGGCGTTCGCCGTGACCGCGCT CAGCTACCTGGTACCTGTGTGCACCATATGGCGCAGCAAATGGAAGGTTCGCTCTTCGCCTCTCCCGCGCGAACCGCTGC GGACTGCGCTCCATGACGGTCTGCGCTTCACGGCGATGTCGTCGGAAATCAAGGCGTCGATCGCGCGCGGAACCCTCTTT GGCCTGGCGAGCATCGCGATACTCGCGCTTCTGCCGCTGGTTGTCCGGGATCAACTGGGAGGAGGCCCCATCGCCTATGG CACCCTGATGGGCGGCTTTGGGACAGGCGCCGTCCTGGCCGGGGTCTCCAACAGCATGCTCAGACGGAGCTTGCAGCTAG AGCGGCTGATGAGGCTTGCCTGCGTCGCTTGCGCGGCATGCTGCCTCTCCCTTGCACTGACCTCTTCGATTGCGGTGGCA GCAATTGCGCTCGCCTTCGGCGGTGCGGGCTGGGTCACCGCATGGTCCGGGCTTGGCGTGAGCGTCCAACTGGCAAGTCC GCGCTGGGTCGTGGGGCGCACCATCTCGATCTACTATGCTTTGATAGACGGCGGCATCGCGGCGGGCAGCTGGATATGGG GCACGGTGACCCAGAACCATTCCCTGACCTTGGCGCTCGAATGCTCCGCTGGCGCCCTATTGCTCGTCGCCGCAGTTGGC GTCCTGTTTCCTCTTCGCGACCGCCGCGACTCCGACCCCGACCCTTTGGAGGAATTCGACACCCCGGCGGTTGCACTCGA TCTCAGGCCGAGAAGCGGTCCGATCGTCGTCAAAGTCGAGTATATGATCCTCGAGAAAAATATTGAGGCTTTCCTCGATC TCATGCGCGAGCGCCGACATGTCCACAGCCGCGTTGGTGCGAGGCACTGGACGCTCCAGCGTAACCTTCAGAAGCCTATG CAGTGGACAGAGACATTCCATACCCCGACCTGGACGGACTACCTTCGCCTCAATCATCGTCTCACGGAAGCAGACAAGGG ACTGGACGAACGTGCTCGCGATTTGCATGCGGGAGAGCACCCACCTCAAATGACACTTTCGATTGAGCGGCCGACACGTT CGACCCGCAAGCCAGAGCAAACAGTGCCATATTTTCCCCGGCATTGA
Upstream 100 bases:
>100_bases TGGCTGGAACCTTGCCATGTATATTCACTGAAGAAGGATGTGTCGGCCCCGTGCATGCGAGCCAAGCTGGCGTTAGAAAC ACTGAGGGGAGTTGAGTAAG
Downstream 100 bases:
>100_bases CCACTGCCCTACGTGAATCCTCGGCTTGGTGCGCGGAAAGCAACTACTCGCCCCCGACGGACAACTCAGTCACACCGATC AATAAGTCATGACCTCGCCA
Product: putative transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Integral Membrane Efflux Protein; MFS Permease; MFS Family Transporter; Facilitator Superfamily Permease; MFS Transporter; Facilitator Superfamily Transporter; Transmembrane Efflux Protein; Permeases Of Facilitator Superfamily; Permease; Mfs Transporter; Facilitator Superfamily; Facilitator MFS1 Protein; Transport Transmembrane Protein; MFS Family Transporter Protein; Transporter Facilitator Family; Arabinose Efflux Permease Family Protein; Facilitator Superfamily Transmembrane Transporter; Permease Of Facilitator Superfamily Protein; Multidrug ABC Transporter; ABC Transporter Permease Protein; Facilitator Transpoter; MFS Family Membrane Efflux Protein; Macrolide-Efflux Protein; Facilitator Superfamily Multidrug Efflux Transporter; Permease Of Facilitator Superfamily; Membrane Efflux Protein MFS; Dioxygenase; MFS Family Diterpenoid Transporter; Drug Resistance Efflux Protein
Number of amino acids: Translated: 548; Mature: 547
Protein sequence:
>548_residues MACTNQEATSPAAFAPLRNSTFRSIWLAIQVANLGWLMQAVAISWLMATISTSDVMVALVQASATLPAFILSVFVGAIAD NFSRRRVMFAGWCLMAIASAMLATSVALGFVAPWMILGFSFLIACGSAVNDPAWQASVGDIVDRRDVPAAVTLLTVGFNT VRTVGPALGGLVVASFGLVTAFAVTALSYLVPVCTIWRSKWKVRSSPLPREPLRTALHDGLRFTAMSSEIKASIARGTLF GLASIAILALLPLVVRDQLGGGPIAYGTLMGGFGTGAVLAGVSNSMLRRSLQLERLMRLACVACAACCLSLALTSSIAVA AIALAFGGAGWVTAWSGLGVSVQLASPRWVVGRTISIYYALIDGGIAAGSWIWGTVTQNHSLTLALECSAGALLLVAAVG VLFPLRDRRDSDPDPLEEFDTPAVALDLRPRSGPIVVKVEYMILEKNIEAFLDLMRERRHVHSRVGARHWTLQRNLQKPM QWTETFHTPTWTDYLRLNHRLTEADKGLDERARDLHAGEHPPQMTLSIERPTRSTRKPEQTVPYFPRH
Sequences:
>Translated_548_residues MACTNQEATSPAAFAPLRNSTFRSIWLAIQVANLGWLMQAVAISWLMATISTSDVMVALVQASATLPAFILSVFVGAIAD NFSRRRVMFAGWCLMAIASAMLATSVALGFVAPWMILGFSFLIACGSAVNDPAWQASVGDIVDRRDVPAAVTLLTVGFNT VRTVGPALGGLVVASFGLVTAFAVTALSYLVPVCTIWRSKWKVRSSPLPREPLRTALHDGLRFTAMSSEIKASIARGTLF GLASIAILALLPLVVRDQLGGGPIAYGTLMGGFGTGAVLAGVSNSMLRRSLQLERLMRLACVACAACCLSLALTSSIAVA AIALAFGGAGWVTAWSGLGVSVQLASPRWVVGRTISIYYALIDGGIAAGSWIWGTVTQNHSLTLALECSAGALLLVAAVG VLFPLRDRRDSDPDPLEEFDTPAVALDLRPRSGPIVVKVEYMILEKNIEAFLDLMRERRHVHSRVGARHWTLQRNLQKPM QWTETFHTPTWTDYLRLNHRLTEADKGLDERARDLHAGEHPPQMTLSIERPTRSTRKPEQTVPYFPRH >Mature_547_residues ACTNQEATSPAAFAPLRNSTFRSIWLAIQVANLGWLMQAVAISWLMATISTSDVMVALVQASATLPAFILSVFVGAIADN FSRRRVMFAGWCLMAIASAMLATSVALGFVAPWMILGFSFLIACGSAVNDPAWQASVGDIVDRRDVPAAVTLLTVGFNTV RTVGPALGGLVVASFGLVTAFAVTALSYLVPVCTIWRSKWKVRSSPLPREPLRTALHDGLRFTAMSSEIKASIARGTLFG LASIAILALLPLVVRDQLGGGPIAYGTLMGGFGTGAVLAGVSNSMLRRSLQLERLMRLACVACAACCLSLALTSSIAVAA IALAFGGAGWVTAWSGLGVSVQLASPRWVVGRTISIYYALIDGGIAAGSWIWGTVTQNHSLTLALECSAGALLLVAAVGV LFPLRDRRDSDPDPLEEFDTPAVALDLRPRSGPIVVKVEYMILEKNIEAFLDLMRERRHVHSRVGARHWTLQRNLQKPMQ WTETFHTPTWTDYLRLNHRLTEADKGLDERARDLHAGEHPPQMTLSIERPTRSTRKPEQTVPYFPRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59175; Mature: 59043
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACTNQEATSPAAFAPLRNSTFRSIWLAIQVANLGWLMQAVAISWLMATISTSDVMVALV CCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH QASATLPAFILSVFVGAIADNFSRRRVMFAGWCLMAIASAMLATSVALGFVAPWMILGFS HHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLIACGSAVNDPAWQASVGDIVDRRDVPAAVTLLTVGFNTVRTVGPALGGLVVASFGLVT HHHHCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH AFAVTALSYLVPVCTIWRSKWKVRSSPLPREPLRTALHDGLRFTAMSSEIKASIARGTLF HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHH GLASIAILALLPLVVRDQLGGGPIAYGTLMGGFGTGAVLAGVSNSMLRRSLQLERLMRLA HHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH CVACAACCLSLALTSSIAVAAIALAFGGAGWVTAWSGLGVSVQLASPRWVVGRTISIYYA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEECCCCEEECCHHEEEEE LIDGGIAAGSWIWGTVTQNHSLTLALECSAGALLLVAAVGVLFPLRDRRDSDPDPLEEFD EHHCCCCCCCEEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCC TPAVALDLRPRSGPIVVKVEYMILEKNIEAFLDLMRERRHVHSRVGARHWTLQRNLQKPM CCEEEEEECCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH QWTETFHTPTWTDYLRLNHRLTEADKGLDERARDLHAGEHPPQMTLSIERPTRSTRKPEQ HHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCC TVPYFPRH CCCCCCCC >Mature Secondary Structure ACTNQEATSPAAFAPLRNSTFRSIWLAIQVANLGWLMQAVAISWLMATISTSDVMVALV CCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH QASATLPAFILSVFVGAIADNFSRRRVMFAGWCLMAIASAMLATSVALGFVAPWMILGFS HHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLIACGSAVNDPAWQASVGDIVDRRDVPAAVTLLTVGFNTVRTVGPALGGLVVASFGLVT HHHHCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH AFAVTALSYLVPVCTIWRSKWKVRSSPLPREPLRTALHDGLRFTAMSSEIKASIARGTLF HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHH GLASIAILALLPLVVRDQLGGGPIAYGTLMGGFGTGAVLAGVSNSMLRRSLQLERLMRLA HHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH CVACAACCLSLALTSSIAVAAIALAFGGAGWVTAWSGLGVSVQLASPRWVVGRTISIYYA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEECCCCEEECCHHEEEEE LIDGGIAAGSWIWGTVTQNHSLTLALECSAGALLLVAAVGVLFPLRDRRDSDPDPLEEFD EHHCCCCCCCEEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCC TPAVALDLRPRSGPIVVKVEYMILEKNIEAFLDLMRERRHVHSRVGARHWTLQRNLQKPM CCEEEEEECCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH QWTETFHTPTWTDYLRLNHRLTEADKGLDERARDLHAGEHPPQMTLSIERPTRSTRKPEQ HHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCC TVPYFPRH CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA