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The map label for this gene is dadA [H]

Identifier: 13475257

GI number: 13475257

Start: 5101501

End: 5102736

Strand: Reverse

Name: dadA [H]

Synonym: mll6285

Alternate gene names: 13475257

Gene position: 5102736-5101501 (Counterclockwise)

Preceding gene: 13475263

Following gene: 13475256

Centisome position: 72.52

GC content: 59.55

Gene sequence:

>1236_bases
ATGAGTGTGATTGTCGTCGGCGCCGGCATTGTCGGACTGAGTGTCGCCTACGAGGCGCTACTAAGCGGAGCGGCGGTCAC
TATCATCGACCGAGACCCTGAGGGCGACAAAGCATCATTCGGCAACGCCGGCGGCATCGCCGTAACCGAAGTGATACCCT
TATCTGTCCCGGGATTGTGGAAGAAAGTGCCCTTCTGGGCTCTGGATCCGCTCGGCCCACTAGCGGTCCGGATCAGGCAT
ACGCCTCATTTATTCCCATGGCTTTGGCGGTTCGCAAAAGTGGGCTCAGCATCCGAAGTGCGACGGATTTCTGGCGCGCT
CGCGGAGATCAACAGCCGCGTTTATGACGATCTCGTGCCGCTCTTCAACAAGGTCGGCCTTGCGAACGATCTGTTTCGCA
AGGGGGCGCTGACCGTCTACGAGAGCGAGAGCGGTCTGAGACGCGACCGGCCGGAGTGGGATGCAAAGCGTGCACTCGGC
GTTGAGAGCCAAGAGTTATCGGCTTCGCAGGTCAGGGACATGGAACCAGCGCTCGGTCCGATAGTGAAAAATGGGGTGTT
CACGCCTCAGTGGTCGCATGTTTCGGATCCGAAGAGGATCGTGGACGTTTTGCGCTGCTGGCTTGCCGATAACGGCGCGG
AAATCTTGCAAGACCAGGTTGACCGTGTAGAGCCTAGAACCGACGGTGCGGCGCTTACGCTAAACGGCGGCAAGACACTG
AGGGCAGCAAAGATCGTCATCGCAGCGGGCGTTTGGTCGGCACAACTCGCCAAGCAATTGGGGGATCGCGTGCTTCTCGA
GAGCGAGCGCGGATACAACACCACGATCGCCTCGCCGGGGGTTGTCCTGGAACGGGAAGTGATATTCGCAGATCGGAAAT
TTGTGGCGACGCCGCTCTCGATCGGCTTGCGGATTGGCGGAGCGGCCGAGTTTGGCGGATTGAAGGCTGCGCCGAACTTC
AACCGCTCGAAAGCCCTCGTGACGCTTGCCAAGCTCTATCTTCCGGGCATCAAGGAAGAGGGAGGCGTGGAGTGGAGCGG
TCATCGGCCTGCCACGCCAGATAGCCTCCCAGTCATAGGCCGGTCTGGCCCGAGCCCGCGTATCATCTATGCGTTCGGTC
ATGGTCATCTTGGACTGACACAGGGGCCAACAACCGGCAAAATCGTCGGGGACCTCCTCTTCGAACGAAAGCCATGCCTG
AATGTGGAGCCTTTTTCTGTGGCCCGCTTTTCTTAG

Upstream 100 bases:

>100_bases
TACAAACCACTTGGATCCAGAATTGTCAAGGCGTTGTAGATTGGATACAGTTGCCAATATGCATATCTGGTGGCTGGAAG
AGAGAAATTAGATGGCTGGG

Downstream 100 bases:

>100_bases
AATAGGAAACGTCTTTAATCCGCCGGCTTTTCTCTGCGCTGTCGCCCTTGTGGAAGCCGCGCGGGTCCTGTTGGCTGGAA
CCTTGCCATGTATATTCACT

Product: D-amino acid dehydrogenase, small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MSVIVVGAGIVGLSVAYEALLSGAAVTIIDRDPEGDKASFGNAGGIAVTEVIPLSVPGLWKKVPFWALDPLGPLAVRIRH
TPHLFPWLWRFAKVGSASEVRRISGALAEINSRVYDDLVPLFNKVGLANDLFRKGALTVYESESGLRRDRPEWDAKRALG
VESQELSASQVRDMEPALGPIVKNGVFTPQWSHVSDPKRIVDVLRCWLADNGAEILQDQVDRVEPRTDGAALTLNGGKTL
RAAKIVIAAGVWSAQLAKQLGDRVLLESERGYNTTIASPGVVLEREVIFADRKFVATPLSIGLRIGGAAEFGGLKAAPNF
NRSKALVTLAKLYLPGIKEEGGVEWSGHRPATPDSLPVIGRSGPSPRIIYAFGHGHLGLTQGPTTGKIVGDLLFERKPCL
NVEPFSVARFS

Sequences:

>Translated_411_residues
MSVIVVGAGIVGLSVAYEALLSGAAVTIIDRDPEGDKASFGNAGGIAVTEVIPLSVPGLWKKVPFWALDPLGPLAVRIRH
TPHLFPWLWRFAKVGSASEVRRISGALAEINSRVYDDLVPLFNKVGLANDLFRKGALTVYESESGLRRDRPEWDAKRALG
VESQELSASQVRDMEPALGPIVKNGVFTPQWSHVSDPKRIVDVLRCWLADNGAEILQDQVDRVEPRTDGAALTLNGGKTL
RAAKIVIAAGVWSAQLAKQLGDRVLLESERGYNTTIASPGVVLEREVIFADRKFVATPLSIGLRIGGAAEFGGLKAAPNF
NRSKALVTLAKLYLPGIKEEGGVEWSGHRPATPDSLPVIGRSGPSPRIIYAFGHGHLGLTQGPTTGKIVGDLLFERKPCL
NVEPFSVARFS
>Mature_410_residues
SVIVVGAGIVGLSVAYEALLSGAAVTIIDRDPEGDKASFGNAGGIAVTEVIPLSVPGLWKKVPFWALDPLGPLAVRIRHT
PHLFPWLWRFAKVGSASEVRRISGALAEINSRVYDDLVPLFNKVGLANDLFRKGALTVYESESGLRRDRPEWDAKRALGV
ESQELSASQVRDMEPALGPIVKNGVFTPQWSHVSDPKRIVDVLRCWLADNGAEILQDQVDRVEPRTDGAALTLNGGKTLR
AAKIVIAAGVWSAQLAKQLGDRVLLESERGYNTTIASPGVVLEREVIFADRKFVATPLSIGLRIGGAAEFGGLKAAPNFN
RSKALVTLAKLYLPGIKEEGGVEWSGHRPATPDSLPVIGRSGPSPRIIYAFGHGHLGLTQGPTTGKIVGDLLFERKPCLN
VEPFSVARFS

Specific function: Oxidative deamination of D-amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=419, Percent_Identity=26.7303102625298, Blast_Score=125, Evalue=6e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 44166; Mature: 44035

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVIVVGAGIVGLSVAYEALLSGAAVTIIDRDPEGDKASFGNAGGIAVTEVIPLSVPGLW
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCHH
KKVPFWALDPLGPLAVRIRHTPHLFPWLWRFAKVGSASEVRRISGALAEINSRVYDDLVP
HHCCCEEECCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LFNKVGLANDLFRKGALTVYESESGLRRDRPEWDAKRALGVESQELSASQVRDMEPALGP
HHHHCCCHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHCCCCHHHCCHHHHHHCCHHHHH
IVKNGVFTPQWSHVSDPKRIVDVLRCWLADNGAEILQDQVDRVEPRTDGAALTLNGGKTL
HHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEECCCCEE
RAAKIVIAAGVWSAQLAKQLGDRVLLESERGYNTTIASPGVVLEREVIFADRKFVATPLS
EEEEEEEEECCHHHHHHHHCCCEEEEECCCCCCCEECCCCEEEEEEEEEECCCEEECHHH
IGLRIGGAAEFGGLKAAPNFNRSKALVTLAKLYLPGIKEEGGVEWSGHRPATPDSLPVIG
EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCEEC
RSGPSPRIIYAFGHGHLGLTQGPTTGKIVGDLLFERKPCLNVEPFSVARFS
CCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SVIVVGAGIVGLSVAYEALLSGAAVTIIDRDPEGDKASFGNAGGIAVTEVIPLSVPGLW
EEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCHH
KKVPFWALDPLGPLAVRIRHTPHLFPWLWRFAKVGSASEVRRISGALAEINSRVYDDLVP
HHCCCEEECCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LFNKVGLANDLFRKGALTVYESESGLRRDRPEWDAKRALGVESQELSASQVRDMEPALGP
HHHHCCCHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHCCCCHHHCCHHHHHHCCHHHHH
IVKNGVFTPQWSHVSDPKRIVDVLRCWLADNGAEILQDQVDRVEPRTDGAALTLNGGKTL
HHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEECCCCEE
RAAKIVIAAGVWSAQLAKQLGDRVLLESERGYNTTIASPGVVLEREVIFADRKFVATPLS
EEEEEEEEECCHHHHHHHHCCCEEEEECCCCCCCEECCCCEEEEEEEEEECCCEEECHHH
IGLRIGGAAEFGGLKAAPNFNRSKALVTLAKLYLPGIKEEGGVEWSGHRPATPDSLPVIG
EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCEEC
RSGPSPRIIYAFGHGHLGLTQGPTTGKIVGDLLFERKPCLNVEPFSVARFS
CCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA