Click here to switch to the map view.

The map label for this gene is 13475253

Identifier: 13475253

GI number: 13475253

Start: 5095327

End: 5095449

Strand: Direct

Name: 13475253

Synonym: msr6281

Alternate gene names: NA

Gene position: 5095327-5095449 (Clockwise)

Preceding gene: 13475250

Following gene: 13475254

Centisome position: 72.42

GC content: 58.54

Gene sequence:

>123_bases
ATGGCCGCCGCCAAATCCTGGCGAAGATTGAAGGGACAAAATCAGTTGCCCAAACTGCTCGCGGGTGCCAGGTTCCAGGA
CGGCATCGAGGCCATCGAAATGAAGCCGCAAAGCGCCGCTTGA

Upstream 100 bases:

>100_bases
GTGGTGAAGGCACCATGGCGACATGCGCCTTCACGGGTAACATTTTAGGTGAGGCAACGAGCCCGCGCGGTAACATTTTC
CTTGAGGCAATGCGACAGTC

Downstream 100 bases:

>100_bases
TCAACCCAGCCACCCAAATTCCGTTATAGCTCTGCTTGACGGCTATCTGGTCCATAACCATGATCCGCCTACCAGCAACA
TGGTTGTGTGGCGCGGCATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 40; Mature: 39

Protein sequence:

>40_residues
MAAAKSWRRLKGQNQLPKLLAGARFQDGIEAIEMKPQSAA

Sequences:

>Translated_40_residues
MAAAKSWRRLKGQNQLPKLLAGARFQDGIEAIEMKPQSAA
>Mature_39_residues
AAAKSWRRLKGQNQLPKLLAGARFQDGIEAIEMKPQSAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4382; Mature: 4251

Theoretical pI: Translated: 11.20; Mature: 11.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAAKSWRRLKGQNQLPKLLAGARFQDGIEAIEMKPQSAA
CCCCHHHHHHCCCCCCHHHHHCCCCCCCHHHHHCCCCCCC
>Mature Secondary Structure 
AAAKSWRRLKGQNQLPKLLAGARFQDGIEAIEMKPQSAA
CCCHHHHHHCCCCCCHHHHHCCCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA