Click here to switch to the map view.

The map label for this gene is 13475250

Identifier: 13475250

GI number: 13475250

Start: 5092704

End: 5093246

Strand: Direct

Name: 13475250

Synonym: mlr6278

Alternate gene names: NA

Gene position: 5092704-5093246 (Clockwise)

Preceding gene: 13475249

Following gene: 13475253

Centisome position: 72.38

GC content: 62.25

Gene sequence:

>543_bases
GTGTGGGCGGACGGGGTCTATCTGCAGGCGCGGATGGAAGACCAAGCCGAATGCATGCTGGTCCTGATCGGCGCCACGCC
CGAGGGCAGGAAAGAACTCGTCGGTTTCCAGACCGGCGTTCGCGAGAGCGCACAGAGCTGGCGCGAGTTGCTGGTCGACG
TGAAGCGGGGTGGCCTGAAGATCGCGCCCGATATTGCCGTCGGCGATGGTGCGCTCGGCTTCTGGAAGGCGCTCGACGAG
GTCTTTCCCGGCACCAGGCACCAACGTTGCTGGGTGCACAAGACAGCCAACGTCCTCAACAAGGTGCCGCTCTCGGTGCA
GGCCAACATGAAGACGGATTTGCGCGAGATTTACGGCGCGAAGTACGATAAGGCGCTCGACTGCCTGAAGAAGGATCGCG
AGACGTTGCTTTCGTTCTACGACTTCCCCGCCGAACACTGGGATCATCTGCGTACGTCGAATCCGATCGAGAGCGTCTTG
CCACCGTTCGCCACCGCACGGTGCGCACGAAGGGCTCCCTGTCATCGAAAACCGCCAGGCTGA

Upstream 100 bases:

>100_bases
GAACCTGTCACCCTCGGTGATCACGCGGCTGACGGGAGAGTAGAACGCCGACTACGAGCGTTGGCAAAAGCGCGATCTTT
CGGCGCGCCACTATGTCTAT

Downstream 100 bases:

>100_bases
TGGTCTTCAAGCTCGTCATGGCTGTCGTGTTGCCTCACCTAATTTTGTTACCGGCTGCCTCACCAAGAATGTTACCCGCT
CGCCAGACGTGCGGAATCTG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MWADGVYLQARMEDQAECMLVLIGATPEGRKELVGFQTGVRESAQSWRELLVDVKRGGLKIAPDIAVGDGALGFWKALDE
VFPGTRHQRCWVHKTANVLNKVPLSVQANMKTDLREIYGAKYDKALDCLKKDRETLLSFYDFPAEHWDHLRTSNPIESVL
PPFATARCARRAPCHRKPPG

Sequences:

>Translated_180_residues
MWADGVYLQARMEDQAECMLVLIGATPEGRKELVGFQTGVRESAQSWRELLVDVKRGGLKIAPDIAVGDGALGFWKALDE
VFPGTRHQRCWVHKTANVLNKVPLSVQANMKTDLREIYGAKYDKALDCLKKDRETLLSFYDFPAEHWDHLRTSNPIESVL
PPFATARCARRAPCHRKPPG
>Mature_180_residues
MWADGVYLQARMEDQAECMLVLIGATPEGRKELVGFQTGVRESAQSWRELLVDVKRGGLKIAPDIAVGDGALGFWKALDE
VFPGTRHQRCWVHKTANVLNKVPLSVQANMKTDLREIYGAKYDKALDCLKKDRETLLSFYDFPAEHWDHLRTSNPIESVL
PPFATARCARRAPCHRKPPG

Specific function: Required for the transposition of the insertion element [H]

COG id: COG3328

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 20275; Mature: 20275

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS01007 TRANSPOSASE_MUTATOR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWADGVYLQARMEDQAECMLVLIGATPEGRKELVGFQTGVRESAQSWRELLVDVKRGGLK
CCCCCEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
IAPDIAVGDGALGFWKALDEVFPGTRHQRCWVHKTANVLNKVPLSVQANMKTDLREIYGA
ECCCCEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEECCCHHHHHHHHCC
KYDKALDCLKKDRETLLSFYDFPAEHWDHLRTSNPIESVLPPFATARCARRAPCHRKPPG
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHCCCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MWADGVYLQARMEDQAECMLVLIGATPEGRKELVGFQTGVRESAQSWRELLVDVKRGGLK
CCCCCEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
IAPDIAVGDGALGFWKALDEVFPGTRHQRCWVHKTANVLNKVPLSVQANMKTDLREIYGA
ECCCCEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEECCCHHHHHHHHCC
KYDKALDCLKKDRETLLSFYDFPAEHWDHLRTSNPIESVLPPFATARCARRAPCHRKPPG
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHCCCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1310791 [H]