| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is gltA [H]
Identifier: 13475241
GI number: 13475241
Start: 5086389
End: 5086622
Strand: Reverse
Name: gltA [H]
Synonym: msl6268
Alternate gene names: 13475241
Gene position: 5086622-5086389 (Counterclockwise)
Preceding gene: 13475242
Following gene: 13475240
Centisome position: 72.29
GC content: 64.53
Gene sequence:
>234_bases GTGGGTCGTCACCCACGGCCACCACCATCGCCGTATCATGAAGGCCATCGAGCCGACCTCGGCGTGCCTCGACCAGACGC TGAAGCCCTGGGCTTCCCCACCACCATGTTCATCGTGCTTTTCGCGGTCGCCCGCACCGTCGGCTGGATCGCGCAGTGGA AGGAAATAATCGAGGATCCGCACCAGAAGATCGGCCGCCCCCGGCCGCTCTTCACTGGCGCTACAGAACGCTAG
Upstream 100 bases:
>100_bases GCACGTACTCGAGCCGGCAATCCCCGAGATCGTCCGGAGGGAAGTCGCCTACCCTCCACAAGGCCGACAGTGCGCGTGTC CTGGATGCCATTTCGTCCTG
Downstream 100 bases:
>100_bases TAGGTACCGATGTCTGATCGTAAAGGCAAGTGAGGGCCAGTTGACGGCGCCGGATCCAGCGCCTCGCGTCCTATCAGATC GGGTCCAGAAAGCGGAAACC
Product: citrate synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MGRHPRPPPSPYHEGHRADLGVPRPDAEALGFPTTMFIVLFAVARTVGWIAQWKEIIEDPHQKIGRPRPLFTGATER
Sequences:
>Translated_77_residues MGRHPRPPPSPYHEGHRADLGVPRPDAEALGFPTTMFIVLFAVARTVGWIAQWKEIIEDPHQKIGRPRPLFTGATER >Mature_76_residues GRHPRPPPSPYHEGHRADLGVPRPDAEALGFPTTMFIVLFAVARTVGWIAQWKEIIEDPHQKIGRPRPLFTGATER
Specific function: Tricarboxylic acid cycle. [C]
COG id: COG0372
COG function: function code C; Citrate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the citrate synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786939, Length=50, Percent_Identity=56, Blast_Score=62, Evalue=9e-12,
Paralogues:
None
Copy number: 624 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016142 - InterPro: IPR016143 - InterPro: IPR002020 - InterPro: IPR016141 - InterPro: IPR019810 - InterPro: IPR010953 [H]
Pfam domain/function: PF00285 Citrate_synt [H]
EC number: =2.3.3.1 [H]
Molecular weight: Translated: 8679; Mature: 8548
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRHPRPPPSPYHEGHRADLGVPRPDAEALGFPTTMFIVLFAVARTVGWIAQWKEIIEDP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HQKIGRPRPLFTGATER HHHCCCCCCCCCCCCCC >Mature Secondary Structure GRHPRPPPSPYHEGHRADLGVPRPDAEALGFPTTMFIVLFAVARTVGWIAQWKEIIEDP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HQKIGRPRPLFTGATER HHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]