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The map label for this gene is ydaV [C]

Identifier: 13475208

GI number: 13475208

Start: 5049999

End: 5050607

Strand: Reverse

Name: ydaV [C]

Synonym: mll6232

Alternate gene names: 13475208

Gene position: 5050607-5049999 (Counterclockwise)

Preceding gene: 13475209

Following gene: 13475207

Centisome position: 71.78

GC content: 62.4

Gene sequence:

>609_bases
ATGAGCAGGACCAAGGATCAGGCCGCCGCCGTGCTGCCCACCCTGCTGTCGGCACTGCGCCTGCCCAGCATCAGCCGCAA
CTGGAAGCATCTGACCGACACGGCCGATCGCGATGGCTGGCCCGCGGCCAACCTTCTCGCCTGCCTGCTCGAGATCGAGA
TGGCCGAGCGCGCCTCTCGACGTATCCAGCGCCATCGCGAACAGTCCGGCTTGCCTGCCGGCAAGACCTTCGCCACTTTC
GATTTCGACTTCCCTTCCGGAATCCGAAAGCCCCATTTGCTTTCCCTGGCTACGGGCGAAGGCTGGATCGAAAGCGGCGG
CAACATCCTCATTTTTGGTCAGAGCGGCACCGGCAAGACTCACGTGATTGCCGCCATCGGCCACGCCCTCATCGATGCCG
GTCGCCGCGTCCTGTTTTCCACAACCACCGAGATGGTGCAGAAGCTTCAGGCCGCTCGCCGCGAGCTCAGTCTCCCCTCG
ATGCTCGACAAACTCGACAAGTACGACCTCATCGTACTCGATTCATGTGCAGTACGCAGAGATGTGGAGTCGCCCTCACT
GGGAGCCACTTTTGCGCGGCGCGTGGCGCGAGCGACTCAACATAAGTGA

Upstream 100 bases:

>100_bases
GCGAGTTCCTGCCCACGGTCAGAAGCCGTGTCGACGTCACCATCCCGCCGCCCGATTTCGCCGGGTACAACCATTTGCTC
GCCAACGCACAGGTGCTGTG

Downstream 100 bases:

>100_bases
ACCACCCGTATCGTGTTCTCCATCCACAACAAGGAGGACACTATGCTGCGTGATCTATTTCCAAGGCACCACAAACGGTA
CGAGAAGTCCCAGTTCTGCG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MSRTKDQAAAVLPTLLSALRLPSISRNWKHLTDTADRDGWPAANLLACLLEIEMAERASRRIQRHREQSGLPAGKTFATF
DFDFPSGIRKPHLLSLATGEGWIESGGNILIFGQSGTGKTHVIAAIGHALIDAGRRVLFSTTTEMVQKLQAARRELSLPS
MLDKLDKYDLIVLDSCAVRRDVESPSLGATFARRVARATQHK

Sequences:

>Translated_202_residues
MSRTKDQAAAVLPTLLSALRLPSISRNWKHLTDTADRDGWPAANLLACLLEIEMAERASRRIQRHREQSGLPAGKTFATF
DFDFPSGIRKPHLLSLATGEGWIESGGNILIFGQSGTGKTHVIAAIGHALIDAGRRVLFSTTTEMVQKLQAARRELSLPS
MLDKLDKYDLIVLDSCAVRRDVESPSLGATFARRVARATQHK
>Mature_201_residues
SRTKDQAAAVLPTLLSALRLPSISRNWKHLTDTADRDGWPAANLLACLLEIEMAERASRRIQRHREQSGLPAGKTFATFD
FDFPSGIRKPHLLSLATGEGWIESGGNILIFGQSGTGKTHVIAAIGHALIDAGRRVLFSTTTEMVQKLQAARRELSLPSM
LDKLDKYDLIVLDSCAVRRDVESPSLGATFARRVARATQHK

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 22185; Mature: 22054

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: PS00675 SIGMA54_INTERACT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTKDQAAAVLPTLLSALRLPSISRNWKHLTDTADRDGWPAANLLACLLEIEMAERASR
CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RIQRHREQSGLPAGKTFATFDFDFPSGIRKPHLLSLATGEGWIESGGNILIFGQSGTGKT
HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCHHCCCCCEEEEECCCCCCH
HVIAAIGHALIDAGRRVLFSTTTEMVQKLQAARRELSLPSMLDKLDKYDLIVLDSCAVRR
HHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCHHHHH
DVESPSLGATFARRVARATQHK
CCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRTKDQAAAVLPTLLSALRLPSISRNWKHLTDTADRDGWPAANLLACLLEIEMAERASR
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RIQRHREQSGLPAGKTFATFDFDFPSGIRKPHLLSLATGEGWIESGGNILIFGQSGTGKT
HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCHHCCCCCEEEEECCCCCCH
HVIAAIGHALIDAGRRVLFSTTTEMVQKLQAARRELSLPSMLDKLDKYDLIVLDSCAVRR
HHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCHHHHH
DVESPSLGATFARRVARATQHK
CCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]