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The map label for this gene is 13475209

Identifier: 13475209

GI number: 13475209

Start: 5050607

End: 5052112

Strand: Reverse

Name: 13475209

Synonym: mll6233

Alternate gene names: NA

Gene position: 5052112-5050607 (Counterclockwise)

Preceding gene: 13475210

Following gene: 13475208

Centisome position: 71.8

GC content: 62.88

Gene sequence:

>1506_bases
ATGCCTGGCCTCCACATCACCGATCAACAGGTACATCGTTACATGTCTCAGCGTCGTCACCACACCCAGGCCGTTGCGGC
GGCCAAGGCCGGTATCAGCGAACGTAGTGCACGCCGGATCGACAAGAATCCGCAGCTGCCATCCCAGAAGAAGCGCGAGC
GGCACTGGCGTACCCGGCCTGACCCCCTCGAACAGATATGGCCACGCGTGGAGGAGCTGCTGAAGATCGCAGGCATCCTC
TCCGTCACCATTTTCGAGACTGTGCAGGACGAGTTCGGGGAGGCCGCCGTCCCCGATGGCGTCAGGCGGACCCTCGAGCG
CCGGATTGCCCGGTGGCGAGCCCTGAATGGGGGCGAGAAGGAGATCTTCTTCCCACAGCATCACGAGATCGGCCGGCAAG
GCCTCTTGGATTTCACCGTCGCTGACGATTTGCATGTCACCATCGCCGGCCAGCGCTTCGACCATCGCCTCTTTCATTTT
CGCCTCGCCAGCAGCGGCTGGGAGGATTCAGCGGTCGTGCTGGGTGGAGAGAGCTTCACCGCTCTGTCCGAGCATCTGCA
GGATGCGCTGTGGAAGCTGGGAGGCGTACCCGCCGAGCTCCGCAGCGACTCGTTATCGGCCGCCTACAAGAACCTCGACG
CCGACGCCCAGCGTGATTTCACCCGCAACTATGAAGCGCTGTGCCGACATTATGGCATGACGCCGACGCGCAACAACAAA
GGTGTCGCCCATGAGAACGGTTCAATCGAAGCTCCCAATGGCCACCTGAAGCGACGGCTCGATCAGGCCCTGCGCCGCCG
GAGCAGCCGCGATTTCCCCAGCATCGAGGATTACCGCCGCTTCGTCGATCAGGAGGTGGCCAAGCAGAACCGACGCCGGG
CCAGGCTCGTGGATGATGAGCGCCGCGTACTCAAGTCGCTGCCGCCGAAGCGAACCACGGATTTTACCCTGGTCAGCGCA
GACGTCACGCGCAACAGCACCATCAGCGTCGACCGTGTCACCTATTCGGTACCCTCGCGCCTCATCGGCTACCGCCTCCA
TGCCCATCTCTATGATGACCGGGTTGAGTTCTTCCTCGGGCCGGACCAGGTGATGACCGCCGACCGGGTCCGCGTCAAAC
ATGCGGAGCGAGGACACAATATCGATTTCCGGCACTTCATCGGCAACCTGAAGCGCAAGCCCCAGGCCCTGCGCTATCTG
GTCTACCGCAATGCCTTGTTCCCCACCCATGCCTATACCCGGGCATGGCAGGCGCTCGATGCCGCGCTCGATGCCCGGCA
GGCCTGCCGCGACATGGTCGCTCTCCTCGATATTGCCGCCAACGGCAACTGCGTCGATGCTCTGGCCCTGCGTATCGAGG
CCGCGCTCGATAGAGGCAAACTCCCCAATGTCGCCAAGCTGAAGAGCGAGTTCCTGCCCACGGTCAGAAGCCGTGTCGAC
GTCACCATCCCGCCGCCCGATTTCGCCGGGTACAACCATTTGCTCGCCAACGCACAGGTGCTGTGA

Upstream 100 bases:

>100_bases
CTGACGGGCGGGCGCGACACAAGCCCCTGCGAGGGGCTCTGATCGGGGCGCGTCGAGTGGTGGTATCGGAACCTATCGAG
CATAGCAGCGATAGGTACCG

Downstream 100 bases:

>100_bases
TGAGCAGGACCAAGGATCAGGCCGCCGCCGTGCTGCCCACCCTGCTGTCGGCACTGCGCCTGCCCAGCATCAGCCGCAAC
TGGAAGCATCTGACCGACAC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 500

Protein sequence:

>501_residues
MPGLHITDQQVHRYMSQRRHHTQAVAAAKAGISERSARRIDKNPQLPSQKKRERHWRTRPDPLEQIWPRVEELLKIAGIL
SVTIFETVQDEFGEAAVPDGVRRTLERRIARWRALNGGEKEIFFPQHHEIGRQGLLDFTVADDLHVTIAGQRFDHRLFHF
RLASSGWEDSAVVLGGESFTALSEHLQDALWKLGGVPAELRSDSLSAAYKNLDADAQRDFTRNYEALCRHYGMTPTRNNK
GVAHENGSIEAPNGHLKRRLDQALRRRSSRDFPSIEDYRRFVDQEVAKQNRRRARLVDDERRVLKSLPPKRTTDFTLVSA
DVTRNSTISVDRVTYSVPSRLIGYRLHAHLYDDRVEFFLGPDQVMTADRVRVKHAERGHNIDFRHFIGNLKRKPQALRYL
VYRNALFPTHAYTRAWQALDAALDARQACRDMVALLDIAANGNCVDALALRIEAALDRGKLPNVAKLKSEFLPTVRSRVD
VTIPPPDFAGYNHLLANAQVL

Sequences:

>Translated_501_residues
MPGLHITDQQVHRYMSQRRHHTQAVAAAKAGISERSARRIDKNPQLPSQKKRERHWRTRPDPLEQIWPRVEELLKIAGIL
SVTIFETVQDEFGEAAVPDGVRRTLERRIARWRALNGGEKEIFFPQHHEIGRQGLLDFTVADDLHVTIAGQRFDHRLFHF
RLASSGWEDSAVVLGGESFTALSEHLQDALWKLGGVPAELRSDSLSAAYKNLDADAQRDFTRNYEALCRHYGMTPTRNNK
GVAHENGSIEAPNGHLKRRLDQALRRRSSRDFPSIEDYRRFVDQEVAKQNRRRARLVDDERRVLKSLPPKRTTDFTLVSA
DVTRNSTISVDRVTYSVPSRLIGYRLHAHLYDDRVEFFLGPDQVMTADRVRVKHAERGHNIDFRHFIGNLKRKPQALRYL
VYRNALFPTHAYTRAWQALDAALDARQACRDMVALLDIAANGNCVDALALRIEAALDRGKLPNVAKLKSEFLPTVRSRVD
VTIPPPDFAGYNHLLANAQVL
>Mature_500_residues
PGLHITDQQVHRYMSQRRHHTQAVAAAKAGISERSARRIDKNPQLPSQKKRERHWRTRPDPLEQIWPRVEELLKIAGILS
VTIFETVQDEFGEAAVPDGVRRTLERRIARWRALNGGEKEIFFPQHHEIGRQGLLDFTVADDLHVTIAGQRFDHRLFHFR
LASSGWEDSAVVLGGESFTALSEHLQDALWKLGGVPAELRSDSLSAAYKNLDADAQRDFTRNYEALCRHYGMTPTRNNKG
VAHENGSIEAPNGHLKRRLDQALRRRSSRDFPSIEDYRRFVDQEVAKQNRRRARLVDDERRVLKSLPPKRTTDFTLVSAD
VTRNSTISVDRVTYSVPSRLIGYRLHAHLYDDRVEFFLGPDQVMTADRVRVKHAERGHNIDFRHFIGNLKRKPQALRYLV
YRNALFPTHAYTRAWQALDAALDARQACRDMVALLDIAANGNCVDALALRIEAALDRGKLPNVAKLKSEFLPTVRSRVDV
TIPPPDFAGYNHLLANAQVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 57257; Mature: 57125

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGLHITDQQVHRYMSQRRHHTQAVAAAKAGISERSARRIDKNPQLPSQKKRERHWRTRP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHCCCCC
DPLEQIWPRVEELLKIAGILSVTIFETVQDEFGEAAVPDGVRRTLERRIARWRALNGGEK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
EIFFPQHHEIGRQGLLDFTVADDLHVTIAGQRFDHRLFHFRLASSGWEDSAVVLGGESFT
CEECCCHHHHHHCCCEEEEECCCEEEEEECCHHHHHHHEEEECCCCCCCCEEEECCCHHH
ALSEHLQDALWKLGGVPAELRSDSLSAAYKNLDADAQRDFTRNYEALCRHYGMTPTRNNK
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHCCCCCCCCCC
GVAHENGSIEAPNGHLKRRLDQALRRRSSRDFPSIEDYRRFVDQEVAKQNRRRARLVDDE
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
RRVLKSLPPKRTTDFTLVSADVTRNSTISVDRVTYSVPSRLIGYRLHAHLYDDRVEFFLG
HHHHHCCCCCCCCCEEEEEECCCCCCEEEEHHEEHHHHHHHHHHHHHHHHHHCCHHEEEC
PDQVMTADRVRVKHAERGHNIDFRHFIGNLKRKPQALRYLVYRNALFPTHAYTRAWQALD
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
AALDARQACRDMVALLDIAANGNCVDALALRIEAALDRGKLPNVAKLKSEFLPTVRSRVD
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEE
VTIPPPDFAGYNHLLANAQVL
EEECCCCCCCCHHHHHCCCCC
>Mature Secondary Structure 
PGLHITDQQVHRYMSQRRHHTQAVAAAKAGISERSARRIDKNPQLPSQKKRERHWRTRP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHCCCCC
DPLEQIWPRVEELLKIAGILSVTIFETVQDEFGEAAVPDGVRRTLERRIARWRALNGGEK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
EIFFPQHHEIGRQGLLDFTVADDLHVTIAGQRFDHRLFHFRLASSGWEDSAVVLGGESFT
CEECCCHHHHHHCCCEEEEECCCEEEEEECCHHHHHHHEEEECCCCCCCCEEEECCCHHH
ALSEHLQDALWKLGGVPAELRSDSLSAAYKNLDADAQRDFTRNYEALCRHYGMTPTRNNK
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHCCCCCCCCCC
GVAHENGSIEAPNGHLKRRLDQALRRRSSRDFPSIEDYRRFVDQEVAKQNRRRARLVDDE
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
RRVLKSLPPKRTTDFTLVSADVTRNSTISVDRVTYSVPSRLIGYRLHAHLYDDRVEFFLG
HHHHHCCCCCCCCCEEEEEECCCCCCEEEEHHEEHHHHHHHHHHHHHHHHHHCCHHEEEC
PDQVMTADRVRVKHAERGHNIDFRHFIGNLKRKPQALRYLVYRNALFPTHAYTRAWQALD
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
AALDARQACRDMVALLDIAANGNCVDALALRIEAALDRGKLPNVAKLKSEFLPTVRSRVD
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEE
VTIPPPDFAGYNHLLANAQVL
EEECCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]