Click here to switch to the map view.

The map label for this gene is 13475200

Identifier: 13475200

GI number: 13475200

Start: 5041900

End: 5043414

Strand: Reverse

Name: 13475200

Synonym: mll6224

Alternate gene names: NA

Gene position: 5043414-5041900 (Counterclockwise)

Preceding gene: 13475201

Following gene: 13475199

Centisome position: 71.68

GC content: 64.95

Gene sequence:

>1515_bases
GTGCCCGGCCGCCACGTAACCGATCACCATATGAGGCTTTTCATGAAGTTCCGGCAGACCAATACGACGGCCGTCGCGGC
GGCGAAGGCGTCGATCAGTATCGCCACGGCCTATCGCATCGAGAAGGATTCGAGACTGCCGTCACAAAAGAAGGCGCCGC
GGCAACGGCGCCGTGCCGACCCTCTCGCCGATATTTTCGAAGCCGAGGTCGCGCCCATGCTGAGGGCAGCTCCGGGCATT
CGGGCGATCGCCATCTTCGACGAGATGATCCGGCGTCATCCCGAGCTTGGAGCCGGCATTCGCCGCACGATCGAGCGTCG
CGTCCGAGCCTGGCGCGCCGTCCATGGCGAGGAACAGGAGGTCATCTTCCGGCAGGTTCACGTACCCGGGCGCATGGGAT
TGTCGGATTTCACCGACATGGCAGCCGCCGGCGTCACGATCGCGGGCCAGCCACTCGATCACCGGCTCTACCATTTCCGG
CTCGCCTATTCCGGCTTCGAGCATGCGCATGTCGTGCTCGGTGGCGAGAGTTTCGTCGCTCTGGCGGAAGGCCTGCAGAA
CGCGCTGTGGTCGCTCGGCGGGGCTCCCCGCGAGCATCGCAGCGACAGCCTGTCGGCGGCGTTCCGCAACCTGGACAAGG
ACGCCCGGGAGGACCTGACGCGCCGCTACGACGAACTGTGCGGCCACTACGGCATGACCCCTTCCCGCAACAATCGCGGC
ATCGCGCATGAGAACGGCTCCGTCGAAGGCCCGCACGGCCATCTCAAGCGGGCGATCAATGACGCGCTGCTGATGCGGGG
ATCGAGCGATTTCGACGACCTGGCAGCCTACCGTCGCTTTGTCGACGAGATCGTCAGCCGCGTGAATGCTCGCAACTCCA
AGCGCATCGACATCGAGCGGGCCGAACTCCAGGAACTGCCCGTCCGGCGCACTTCCGACTACGAGGAGGTCACCGTGCGC
ATAACGTCATCGGGCGGGTTCACGCTGCGCAAGGTGTTCTACACCGTGCCCTCACGCCTGATCGGCCACCGCCTCAGAGT
GCGGCTCTTCGATGATCGGCTGGATATCTTCATCGGCGGCACGCAGCTCATGACGCTGCCGCGCGGGCGCGCCTCTTCAA
ACGGCAAGCACGACCAGGTCGTCAATTATCGGCATGTCATCCATTCGCTGCGCCGCAAGCCGATGGCGCTGCTCAACCTC
GTCTATCGTGACCAGCTCTTCCCCCGCGAGGCCTACCGGCGAACCTTCGACGTGCTCATAGAGCGACTGCCTGAGCGGCA
GGCCTGCCGCACCATGGTCGAGCTTCTCGCCATGGCGCACGAGCGCGGCTGCGAGAGCGAACTGGCTGATCAACTGACCG
CCTCGCTACAGGCACGGCGATTGCCCAACATGGCTGCTTTGCGGGAACGGTTCGCGCCGGATCCCGCCCGGCTGCCGAGT
GTCGTCGTGCGTCTTGCTCCGCTCAACGCCTATGAAGCCCTGCTTGGCGCCAACCTGACAGGAGATGCGGCATGA

Upstream 100 bases:

>100_bases
TCAATCCGCCGGCGGCGCGTTCCTTTTCGGGAGCGTTCGTCTGGTGATCACGGTCGACCGGGTATGCCGGTGGTTTTTCC
TGTTGGGGAGGAATCGCTTT

Downstream 100 bases:

>100_bases
AGACGAACCCCGCTGTCGATTCCGCCAGGCTGGGCTTGCTCCTCAACGAACTGCGCCTGCCGGCCATCAAGGTTATGTGG
CCGCAGTTTGCCGAACGGGC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 503

Protein sequence:

>504_residues
MPGRHVTDHHMRLFMKFRQTNTTAVAAAKASISIATAYRIEKDSRLPSQKKAPRQRRRADPLADIFEAEVAPMLRAAPGI
RAIAIFDEMIRRHPELGAGIRRTIERRVRAWRAVHGEEQEVIFRQVHVPGRMGLSDFTDMAAAGVTIAGQPLDHRLYHFR
LAYSGFEHAHVVLGGESFVALAEGLQNALWSLGGAPREHRSDSLSAAFRNLDKDAREDLTRRYDELCGHYGMTPSRNNRG
IAHENGSVEGPHGHLKRAINDALLMRGSSDFDDLAAYRRFVDEIVSRVNARNSKRIDIERAELQELPVRRTSDYEEVTVR
ITSSGGFTLRKVFYTVPSRLIGHRLRVRLFDDRLDIFIGGTQLMTLPRGRASSNGKHDQVVNYRHVIHSLRRKPMALLNL
VYRDQLFPREAYRRTFDVLIERLPERQACRTMVELLAMAHERGCESELADQLTASLQARRLPNMAALRERFAPDPARLPS
VVVRLAPLNAYEALLGANLTGDAA

Sequences:

>Translated_504_residues
MPGRHVTDHHMRLFMKFRQTNTTAVAAAKASISIATAYRIEKDSRLPSQKKAPRQRRRADPLADIFEAEVAPMLRAAPGI
RAIAIFDEMIRRHPELGAGIRRTIERRVRAWRAVHGEEQEVIFRQVHVPGRMGLSDFTDMAAAGVTIAGQPLDHRLYHFR
LAYSGFEHAHVVLGGESFVALAEGLQNALWSLGGAPREHRSDSLSAAFRNLDKDAREDLTRRYDELCGHYGMTPSRNNRG
IAHENGSVEGPHGHLKRAINDALLMRGSSDFDDLAAYRRFVDEIVSRVNARNSKRIDIERAELQELPVRRTSDYEEVTVR
ITSSGGFTLRKVFYTVPSRLIGHRLRVRLFDDRLDIFIGGTQLMTLPRGRASSNGKHDQVVNYRHVIHSLRRKPMALLNL
VYRDQLFPREAYRRTFDVLIERLPERQACRTMVELLAMAHERGCESELADQLTASLQARRLPNMAALRERFAPDPARLPS
VVVRLAPLNAYEALLGANLTGDAA
>Mature_503_residues
PGRHVTDHHMRLFMKFRQTNTTAVAAAKASISIATAYRIEKDSRLPSQKKAPRQRRRADPLADIFEAEVAPMLRAAPGIR
AIAIFDEMIRRHPELGAGIRRTIERRVRAWRAVHGEEQEVIFRQVHVPGRMGLSDFTDMAAAGVTIAGQPLDHRLYHFRL
AYSGFEHAHVVLGGESFVALAEGLQNALWSLGGAPREHRSDSLSAAFRNLDKDAREDLTRRYDELCGHYGMTPSRNNRGI
AHENGSVEGPHGHLKRAINDALLMRGSSDFDDLAAYRRFVDEIVSRVNARNSKRIDIERAELQELPVRRTSDYEEVTVRI
TSSGGFTLRKVFYTVPSRLIGHRLRVRLFDDRLDIFIGGTQLMTLPRGRASSNGKHDQVVNYRHVIHSLRRKPMALLNLV
YRDQLFPREAYRRTFDVLIERLPERQACRTMVELLAMAHERGCESELADQLTASLQARRLPNMAALRERFAPDPARLPSV
VVRLAPLNAYEALLGANLTGDAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 56987; Mature: 56856

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGRHVTDHHMRLFMKFRQTNTTAVAAAKASISIATAYRIEKDSRLPSQKKAPRQRRRAD
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHEEEHHHEEECCCCCCCCHHCCHHHHHCCC
PLADIFEAEVAPMLRAAPGIRAIAIFDEMIRRHPELGAGIRRTIERRVRAWRAVHGEEQE
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHH
VIFRQVHVPGRMGLSDFTDMAAAGVTIAGQPLDHRLYHFRLAYSGFEHAHVVLGGESFVA
HHHHHHCCCCCCCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCCEEEEECCCHHHH
LAEGLQNALWSLGGAPREHRSDSLSAAFRNLDKDAREDLTRRYDELCGHYGMTPSRNNRG
HHHHHHHHHHHCCCCCCHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
IAHENGSVEGPHGHLKRAINDALLMRGSSDFDDLAAYRRFVDEIVSRVNARNSKRIDIER
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
AELQELPVRRTSDYEEVTVRITSSGGFTLRKVFYTVPSRLIGHRLRVRLFDDRLDIFIGG
HHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEECC
TQLMTLPRGRASSNGKHDQVVNYRHVIHSLRRKPMALLNLVYRDQLFPREAYRRTFDVLI
EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHH
ERLPERQACRTMVELLAMAHERGCESELADQLTASLQARRLPNMAALRERFAPDPARLPS
HHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHH
VVVRLAPLNAYEALLGANLTGDAA
HHHHHCCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PGRHVTDHHMRLFMKFRQTNTTAVAAAKASISIATAYRIEKDSRLPSQKKAPRQRRRAD
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHEEEHHHEEECCCCCCCCHHCCHHHHHCCC
PLADIFEAEVAPMLRAAPGIRAIAIFDEMIRRHPELGAGIRRTIERRVRAWRAVHGEEQE
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHH
VIFRQVHVPGRMGLSDFTDMAAAGVTIAGQPLDHRLYHFRLAYSGFEHAHVVLGGESFVA
HHHHHHCCCCCCCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCCEEEEECCCHHHH
LAEGLQNALWSLGGAPREHRSDSLSAAFRNLDKDAREDLTRRYDELCGHYGMTPSRNNRG
HHHHHHHHHHHCCCCCCHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
IAHENGSVEGPHGHLKRAINDALLMRGSSDFDDLAAYRRFVDEIVSRVNARNSKRIDIER
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
AELQELPVRRTSDYEEVTVRITSSGGFTLRKVFYTVPSRLIGHRLRVRLFDDRLDIFIGG
HHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEECC
TQLMTLPRGRASSNGKHDQVVNYRHVIHSLRRKPMALLNLVYRDQLFPREAYRRTFDVLI
EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHH
ERLPERQACRTMVELLAMAHERGCESELADQLTASLQARRLPNMAALRERFAPDPARLPS
HHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHH
VVVRLAPLNAYEALLGANLTGDAA
HHHHHCCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]