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The map label for this gene is 13475201

Identifier: 13475201

GI number: 13475201

Start: 5043528

End: 5044076

Strand: Reverse

Name: 13475201

Synonym: mll6225

Alternate gene names: NA

Gene position: 5044076-5043528 (Counterclockwise)

Preceding gene: 13475203

Following gene: 13475200

Centisome position: 71.69

GC content: 64.48

Gene sequence:

>549_bases
ATGTCGCAATGGCTGGACGAGCATCGCGAGCTTTTGAGCCTGGTGACGCGGGACCTGCGCCGGCACGGTCTCAAGGAGAC
CGGCCGCGAGGGCCTGCCGGCGGAGGCTGTGCTGCGCTGCGCGCTGCTCAAGCAGCATCGCCAACTAAGCTATCAGGAAC
TGGCCTTTCACTTGGAGGATTCCGCCTCGTTCCGGGCTTTTGCCCGGCTGCCATGGGGGTGGAGCCCAAAGAAATCAGTC
CTGCACAAGACGATCAGCGCGATCCGGGCGCCGACCTGGGAAGAGATCAACAAAGTACTGCTGGCAAGCGCCAGGCGAGA
GAAGCTGGAAAGCGGCAAGGTCGTGCGCGTGGACAGCACCGTCACCGCCGCGCTCGTCCACGAGCCGAGCGACAGCAGCC
TGTTATGGGACGCTGTGCGGGTGATGGTGCGGCTGTTGCAGCACGCGGATGCACTGGGCAGCGCCATCCTGCGGCGCGGC
AATCAACGTGAGTGCGCAGCGTCAATCAGGATGAGAATGCCGGCGGATTGGAACGCAGGGAGGGCGTAG

Upstream 100 bases:

>100_bases
TCTGCCACCGCCGGAGCCGACAATGCGCCAAGAACGCACCGTCCAATCCAGTGTATTTGATCTTTTCGCCCGACACGAGA
TCGGCTGTGAATTGAAAGCC

Downstream 100 bases:

>100_bases
CCCGACCGGAGTTTCAATCCGCCGGCGGCGCGTTCCTTTTCGGGAGCGTTCGTCTGGTGATCACGGTCGACCGGGTATGC
CGGTGGTTTTTCCTGTTGGG

Product: transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; TRm17a Transposase Fragment; Partial Transposase Of Insertion Sequence; Methyl-Accepting Chemotaxis Sensory Transducer; IS5 Family Transposase

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MSQWLDEHRELLSLVTRDLRRHGLKETGREGLPAEAVLRCALLKQHRQLSYQELAFHLEDSASFRAFARLPWGWSPKKSV
LHKTISAIRAPTWEEINKVLLASARREKLESGKVVRVDSTVTAALVHEPSDSSLLWDAVRVMVRLLQHADALGSAILRRG
NQRECAASIRMRMPADWNAGRA

Sequences:

>Translated_182_residues
MSQWLDEHRELLSLVTRDLRRHGLKETGREGLPAEAVLRCALLKQHRQLSYQELAFHLEDSASFRAFARLPWGWSPKKSV
LHKTISAIRAPTWEEINKVLLASARREKLESGKVVRVDSTVTAALVHEPSDSSLLWDAVRVMVRLLQHADALGSAILRRG
NQRECAASIRMRMPADWNAGRA
>Mature_181_residues
SQWLDEHRELLSLVTRDLRRHGLKETGREGLPAEAVLRCALLKQHRQLSYQELAFHLEDSASFRAFARLPWGWSPKKSVL
HKTISAIRAPTWEEINKVLLASARREKLESGKVVRVDSTVTAALVHEPSDSSLLWDAVRVMVRLLQHADALGSAILRRGN
QRECAASIRMRMPADWNAGRA

Specific function: Unknown

COG id: COG3039

COG function: function code L; Transposase and inactivated derivatives, IS5 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20634; Mature: 20503

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQWLDEHRELLSLVTRDLRRHGLKETGREGLPAEAVLRCALLKQHRQLSYQELAFHLED
CCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCC
SASFRAFARLPWGWSPKKSVLHKTISAIRAPTWEEINKVLLASARREKLESGKVVRVDST
CCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCH
VTAALVHEPSDSSLLWDAVRVMVRLLQHADALGSAILRRGNQRECAASIRMRMPADWNAG
HHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
RA
CC
>Mature Secondary Structure 
SQWLDEHRELLSLVTRDLRRHGLKETGREGLPAEAVLRCALLKQHRQLSYQELAFHLED
CHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCC
SASFRAFARLPWGWSPKKSVLHKTISAIRAPTWEEINKVLLASARREKLESGKVVRVDST
CCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCH
VTAALVHEPSDSSLLWDAVRVMVRLLQHADALGSAILRRGNQRECAASIRMRMPADWNAG
HHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
RA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA