| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is nolO [H]
Identifier: 13475153
GI number: 13475153
Start: 4991033
End: 4993054
Strand: Direct
Name: nolO [H]
Synonym: mlr6171
Alternate gene names: 13475153
Gene position: 4991033-4993054 (Clockwise)
Preceding gene: 13475152
Following gene: 13475154
Centisome position: 70.93
GC content: 57.52
Gene sequence:
>2022_bases ATGCTGTGTCTAGGATTGAGCGGCGGATTAGACAAAGTCTATGAAAACCGATTCCAGATTGCGAATACATTCATGCACGA TGGCGCTGCGGTGCTCGTCCGAGACGGACAGGTCATCGCGGCCGTAGAAGAGGAGCGCCTCAATCGGATCAAGCACTCCA ACAAGCTCCCAATCAGTTCGGTTCAATACTGTCTTTCAGCCGCTGGGGTTCAGCTCGGCGAAATCGATCATGTGGCGTAC TACGCTACCGAAGCCTATTGCAACGCCATGCTCGAAAACATGCTTGCTTCCGAGCCCGACGCCTCCATTCCGTTGGATGC CAAATTTTTGGTGCAGCAGCTGTTGGCGCAGGAGTTCGGTAGCGAGCTCGACCCTTCGCGTATCTCATTCGTAAGTCATC ATCAGGCGCACGCCGTGAGTGCTTTTGCAATGTCGGGCTTCGAGCAAAGTCTGATTTTCGCGATTGATGGCTCTGGTGAT TTCCAGTCGGGTCTTGTGGCGGTAGGATCTGGTGCTGAAATTTCGCAACTCGCGACTTTCCCAGAGAACAATTCCCTTGG GCTATTTTATCTCGAGGTGATCCGGTATCTTGGCTACGGCTTGTTCGATGAATATAAGGTAATGGGGCTTGCCCCCTACG GCGATCCCGCTCCCTATCGCGAGCTTTTCGAGCAGTTCTATGAACTGTCTGCAAACGGCGAGTATCGCGTCCACCTGGAC CGCATCGGTCCGACTTTGCTTCGCACCATTCAGGTCCGGCAAAAGGGAATGCCATTCACTCAGCAGCACAAAGATGTGAG TGCGTCGCTACAGGAAGCACTCGAACGCATCGTGTTTCACATTCTTCGGCATCATCGTGAGGCCACGGGGATGACGCGGC TGTGCCTGGCCGGTGGCGTTGCGCACAATTGCTCCATGAACGGCAAGCTGCTCTATTCAGGCCTTTTCGAAGACATCTTC GTGCAGCCCGCGTCGCATGACGCTGGCTGCGCATTGGGCGCTGCATTAATCGTGTCTGGTGAGTTGGGCCGCCCCGCGCC GCGTGCGCGATTGCAGGAGGTTTATTGGGGGCCGGATCTCGCGAGCGATCATGCTGTGGAAGAGGAACTAAAGGCATGGG CGGGGCACCTGGAGTTTGAACGCACTGAGGAGGTGGCGGATAGGGCAGCCGAGTGGATGGCCGGTGGCGCCGTGATCGGC TGGGTGCAAGGTCGTTCGGAGTTCGGGCCGCGCGCGCTCGGAAATCGCAGCATTCTTGCCGACCCCAGGCCCGCCACAAA CAAGGACCGGATCAACGCCATGGTCAAGAAGCGGGAAGGGTATCGCCCGTTCGCCCCATCAGTGCTGGAGGAGGATGCGC GCGAATTTTTCGACCTCCCAGGCAGTGCGTGCGAATTTCCCTTCATGAATTTCGTGGTCCGTGTGCGCGACTCCAAGCGT GGTTTGCTCGGCGCCATCACGCACGTCGACGGTACGGCTCGGCTGCAAACAGTATCGCGCAAGGCCAGTCCGGCCTACTG GGACGTCATCAATGCCTTCAAGCAGCGCACTGGCATCCCAATTCTGCTCAACACGTCCTTTAACAACAATGCCGAGCCGA TCGTGGATTCAGTTGCAGACTCGATTGCCACGTTCCTGACGACAGGGTTGGATGGACTTGTGGTCGGGCCGTTCCTCGTC AAAAAACGGGCCGCAACGCTGGAGGATTGGACTGCGCTAGCGGTTTCATTGCCGCCTTATGTATCCCTGTATAAGGTCCG CGCTCACACGGCGCTGGATCGCCAGGAGACCATCTGCGAAATCCGAACGGATCACTCCAGCCGTGACGGTGTGCGTATTT CACCTGAATTGTTCGATCTGCTGACGCGAATCGAGGGCGAAGCCGTGCTCGCGGATCTCCTCGATACAATTACGCTGGAT CAGGCCCAGCGCGAGGCTCTCACAGGAGAACTGCGACGGTTGTGGGAGCAGCGCCGCGTTCGGATGCGTCCCTCGCAAGC TGCTCGCGTCCATCAAAACTGA
Upstream 100 bases:
>100_bases TGGCGTTCGCGGCGGCGAACGACAACGCAGCCTGTGTTTTTGATCAAACGGCCTTGAGACAGGCCAATTCAGTCTTCCTG TACGATAAACGGAGAGCGAG
Downstream 100 bases:
>100_bases TGCCAAAAGCTGGACGACAGATAACAGTTGCCGAAACACCGTTCTGTCCAAGCATCTTCATATGACTGTGCCCAGGCTGC GAGCATGCATAACGCCTATG
Product: nodulation protein NOLO
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 673; Mature: 673
Protein sequence:
>673_residues MLCLGLSGGLDKVYENRFQIANTFMHDGAAVLVRDGQVIAAVEEERLNRIKHSNKLPISSVQYCLSAAGVQLGEIDHVAY YATEAYCNAMLENMLASEPDASIPLDAKFLVQQLLAQEFGSELDPSRISFVSHHQAHAVSAFAMSGFEQSLIFAIDGSGD FQSGLVAVGSGAEISQLATFPENNSLGLFYLEVIRYLGYGLFDEYKVMGLAPYGDPAPYRELFEQFYELSANGEYRVHLD RIGPTLLRTIQVRQKGMPFTQQHKDVSASLQEALERIVFHILRHHREATGMTRLCLAGGVAHNCSMNGKLLYSGLFEDIF VQPASHDAGCALGAALIVSGELGRPAPRARLQEVYWGPDLASDHAVEEELKAWAGHLEFERTEEVADRAAEWMAGGAVIG WVQGRSEFGPRALGNRSILADPRPATNKDRINAMVKKREGYRPFAPSVLEEDAREFFDLPGSACEFPFMNFVVRVRDSKR GLLGAITHVDGTARLQTVSRKASPAYWDVINAFKQRTGIPILLNTSFNNNAEPIVDSVADSIATFLTTGLDGLVVGPFLV KKRAATLEDWTALAVSLPPYVSLYKVRAHTALDRQETICEIRTDHSSRDGVRISPELFDLLTRIEGEAVLADLLDTITLD QAQREALTGELRRLWEQRRVRMRPSQAARVHQN
Sequences:
>Translated_673_residues MLCLGLSGGLDKVYENRFQIANTFMHDGAAVLVRDGQVIAAVEEERLNRIKHSNKLPISSVQYCLSAAGVQLGEIDHVAY YATEAYCNAMLENMLASEPDASIPLDAKFLVQQLLAQEFGSELDPSRISFVSHHQAHAVSAFAMSGFEQSLIFAIDGSGD FQSGLVAVGSGAEISQLATFPENNSLGLFYLEVIRYLGYGLFDEYKVMGLAPYGDPAPYRELFEQFYELSANGEYRVHLD RIGPTLLRTIQVRQKGMPFTQQHKDVSASLQEALERIVFHILRHHREATGMTRLCLAGGVAHNCSMNGKLLYSGLFEDIF VQPASHDAGCALGAALIVSGELGRPAPRARLQEVYWGPDLASDHAVEEELKAWAGHLEFERTEEVADRAAEWMAGGAVIG WVQGRSEFGPRALGNRSILADPRPATNKDRINAMVKKREGYRPFAPSVLEEDAREFFDLPGSACEFPFMNFVVRVRDSKR GLLGAITHVDGTARLQTVSRKASPAYWDVINAFKQRTGIPILLNTSFNNNAEPIVDSVADSIATFLTTGLDGLVVGPFLV KKRAATLEDWTALAVSLPPYVSLYKVRAHTALDRQETICEIRTDHSSRDGVRISPELFDLLTRIEGEAVLADLLDTITLD QAQREALTGELRRLWEQRRVRMRPSQAARVHQN >Mature_673_residues MLCLGLSGGLDKVYENRFQIANTFMHDGAAVLVRDGQVIAAVEEERLNRIKHSNKLPISSVQYCLSAAGVQLGEIDHVAY YATEAYCNAMLENMLASEPDASIPLDAKFLVQQLLAQEFGSELDPSRISFVSHHQAHAVSAFAMSGFEQSLIFAIDGSGD FQSGLVAVGSGAEISQLATFPENNSLGLFYLEVIRYLGYGLFDEYKVMGLAPYGDPAPYRELFEQFYELSANGEYRVHLD RIGPTLLRTIQVRQKGMPFTQQHKDVSASLQEALERIVFHILRHHREATGMTRLCLAGGVAHNCSMNGKLLYSGLFEDIF VQPASHDAGCALGAALIVSGELGRPAPRARLQEVYWGPDLASDHAVEEELKAWAGHLEFERTEEVADRAAEWMAGGAVIG WVQGRSEFGPRALGNRSILADPRPATNKDRINAMVKKREGYRPFAPSVLEEDAREFFDLPGSACEFPFMNFVVRVRDSKR GLLGAITHVDGTARLQTVSRKASPAYWDVINAFKQRTGIPILLNTSFNNNAEPIVDSVADSIATFLTTGLDGLVVGPFLV KKRAATLEDWTALAVSLPPYVSLYKVRAHTALDRQETICEIRTDHSSRDGVRISPELFDLLTRIEGEAVLADLLDTITLD QAQREALTGELRRLWEQRRVRMRPSQAARVHQN
Specific function: Involved in the O-carbamoylation of nod factors [H]
COG id: COG2192
COG function: function code O; Predicted carbamoyl transferase, NodU family
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NodU/CmcH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003696 [H]
Pfam domain/function: PF02543 CmcH_NodU [H]
EC number: NA
Molecular weight: Translated: 74423; Mature: 74423
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCLGLSGGLDKVYENRFQIANTFMHDGAAVLVRDGQVIAAVEEERLNRIKHSNKLPISS CEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEHHHHHHHHHHCCCCCCHHH VQYCLSAAGVQLGEIDHVAYYATEAYCNAMLENMLASEPDASIPLDAKFLVQQLLAQEFG HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC SELDPSRISFVSHHQAHAVSAFAMSGFEQSLIFAIDGSGDFQSGLVAVGSGAEISQLATF CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCCHHHHHCC PENNSLGLFYLEVIRYLGYGLFDEYKVMGLAPYGDPAPYRELFEQFYELSANGEYRVHLD CCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEH RIGPTLLRTIQVRQKGMPFTQQHKDVSASLQEALERIVFHILRHHREATGMTRLCLAGGV HHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC AHNCSMNGKLLYSGLFEDIFVQPASHDAGCALGAALIVSGELGRPAPRARLQEVYWGPDL CCCCCCCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHEEECCCCCCCHHHHHHHHHCCCCC ASDHAVEEELKAWAGHLEFERTEEVADRAAEWMAGGAVIGWVQGRSEFGPRALGNRSILA CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEC DPRPATNKDRINAMVKKREGYRPFAPSVLEEDAREFFDLPGSACEFPFMNFVVRVRDSKR CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHEEECCCCC GLLGAITHVDGTARLQTVSRKASPAYWDVINAFKQRTGIPILLNTSFNNNAEPIVDSVAD CCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHH SIATFLTTGLDGLVVGPFLVKKRAATLEDWTALAVSLPPYVSLYKVRAHTALDRQETICE HHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHEEEEECCCHHHHHHHHHHHHHCHHHHHHH IRTDHSSRDGVRISPELFDLLTRIEGEAVLADLLDTITLDQAQREALTGELRRLWEQRRV HCCCCCCCCCCEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMRPSQAARVHQN HCCCHHHHHCCCC >Mature Secondary Structure MLCLGLSGGLDKVYENRFQIANTFMHDGAAVLVRDGQVIAAVEEERLNRIKHSNKLPISS CEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEHHHHHHHHHHCCCCCCHHH VQYCLSAAGVQLGEIDHVAYYATEAYCNAMLENMLASEPDASIPLDAKFLVQQLLAQEFG HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC SELDPSRISFVSHHQAHAVSAFAMSGFEQSLIFAIDGSGDFQSGLVAVGSGAEISQLATF CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCCHHHHHCC PENNSLGLFYLEVIRYLGYGLFDEYKVMGLAPYGDPAPYRELFEQFYELSANGEYRVHLD CCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEH RIGPTLLRTIQVRQKGMPFTQQHKDVSASLQEALERIVFHILRHHREATGMTRLCLAGGV HHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC AHNCSMNGKLLYSGLFEDIFVQPASHDAGCALGAALIVSGELGRPAPRARLQEVYWGPDL CCCCCCCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHEEECCCCCCCHHHHHHHHHCCCCC ASDHAVEEELKAWAGHLEFERTEEVADRAAEWMAGGAVIGWVQGRSEFGPRALGNRSILA CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEC DPRPATNKDRINAMVKKREGYRPFAPSVLEEDAREFFDLPGSACEFPFMNFVVRVRDSKR CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHEEECCCCC GLLGAITHVDGTARLQTVSRKASPAYWDVINAFKQRTGIPILLNTSFNNNAEPIVDSVAD CCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHH SIATFLTTGLDGLVVGPFLVKKRAATLEDWTALAVSLPPYVSLYKVRAHTALDRQETICE HHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHEEEEECCCHHHHHHHHHHHHHCHHHHHHH IRTDHSSRDGVRISPELFDLLTRIEGEAVLADLLDTITLDQAQREALTGELRRLWEQRRV HCCCCCCCCCCEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMRPSQAARVHQN HCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]