| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475146
Identifier: 13475146
GI number: 13475146
Start: 4982070
End: 4983044
Strand: Direct
Name: 13475146
Synonym: mlr6158
Alternate gene names: NA
Gene position: 4982070-4983044 (Clockwise)
Preceding gene: 13475145
Following gene: 13475147
Centisome position: 70.81
GC content: 63.49
Gene sequence:
>975_bases ATGACCCTTTCGAGCCCTGACAAATCCGGCGCCGCCAGTCTCGAGGCCATCGCGCGAAACGGCGGCGTGCTGCGCCGCAT CGCCGTGCGCATTCCGACCTATCTGTCGGACATTCGCGAGAACCCGGCATGGCTGCCGATGTTCGTGCTCGCCCGCACCA TGCCGGCGCGCCGGATGCACTGGCGTGGGGCTAAGCCGGTTCGCGTGTCGCAAAAAGCCCACGACACGATGTTTGCCGGC GTCGATCGCCAGGAAATTGTCGAGGCGCTGCGGTCGGACGGGCTGTTTTGCGGGCTCGTCCTGCCGACTTCCATCCATAA GGAGATCGCCGCCTTCGCCCGCTACACGCCTTGTTTCGGCAATTTCGATCGCCGTCTCGAATTCATGGCTGAGGACCATG CCGAGGCCGAGAAGCGTTTCGGCCGCCCCTTGCTCAGCGGCCACTTATTCGAACACATCCTCGGCTGCAAGGCAGCGGTC GCCATCCAGAACGATCCGCTGCTGCTCGACATCGCCGCGCATTATCTGGGCGCTCAGGCGAAATTGATCACCACACGCGT GTGGTGGAGCTTCCCGACCAGCGAGGCTTCCGACGCCGACAAGAACCGTGCCTCGCTCGGCAAGTATCATTTCGACCTCG ATGACTGGCGGATGCTGAAATTCTTCTTCTACCTGACGCCGGTCGACGAAGGCACCGGCCCGCATGTCTATGTCCGTGGC AGTCATAACCGCCGCGCCATCAAGCATCAGCTGACGCTGCTTGTCGGCCATCCGGCGCAGGAGGTTCTCAAGGTCTATGG CGACGACAGTCCCGTCACGCTGACCGGCGAAGCCGGCCTCGGCTTCGTCGAGGATCCGTTCGGCTTCCATATGGGCACCG TGCCTTCGCGCACGCCACGACTGATGATGGAAGTCGGCTTCGGCGTCTCGCCGCCCTCGCGCCGGCGCTTCCATGGCGAG CCGGTTATTCGCTGA
Upstream 100 bases:
>100_bases CACGTCCTTCCGTTGCGGGAATCGGGCTTGGACCAGCGGCGAGGCAGTGAGAACCGATGCTTCGTCGATATCATATTGCA TTCATAGCTGAGGACCCTTC
Downstream 100 bases:
>100_bases TCTCGCAAAAAGTCCTTAATAGCCTTCCCCAGATCAGACGCCTGGTTCTCCCTTGGGCTGGCTGGTGCCATGGCGTCGTC ATGGGATCAGCTGGCACGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MTLSSPDKSGAASLEAIARNGGVLRRIAVRIPTYLSDIRENPAWLPMFVLARTMPARRMHWRGAKPVRVSQKAHDTMFAG VDRQEIVEALRSDGLFCGLVLPTSIHKEIAAFARYTPCFGNFDRRLEFMAEDHAEAEKRFGRPLLSGHLFEHILGCKAAV AIQNDPLLLDIAAHYLGAQAKLITTRVWWSFPTSEASDADKNRASLGKYHFDLDDWRMLKFFFYLTPVDEGTGPHVYVRG SHNRRAIKHQLTLLVGHPAQEVLKVYGDDSPVTLTGEAGLGFVEDPFGFHMGTVPSRTPRLMMEVGFGVSPPSRRRFHGE PVIR
Sequences:
>Translated_324_residues MTLSSPDKSGAASLEAIARNGGVLRRIAVRIPTYLSDIRENPAWLPMFVLARTMPARRMHWRGAKPVRVSQKAHDTMFAG VDRQEIVEALRSDGLFCGLVLPTSIHKEIAAFARYTPCFGNFDRRLEFMAEDHAEAEKRFGRPLLSGHLFEHILGCKAAV AIQNDPLLLDIAAHYLGAQAKLITTRVWWSFPTSEASDADKNRASLGKYHFDLDDWRMLKFFFYLTPVDEGTGPHVYVRG SHNRRAIKHQLTLLVGHPAQEVLKVYGDDSPVTLTGEAGLGFVEDPFGFHMGTVPSRTPRLMMEVGFGVSPPSRRRFHGE PVIR >Mature_323_residues TLSSPDKSGAASLEAIARNGGVLRRIAVRIPTYLSDIRENPAWLPMFVLARTMPARRMHWRGAKPVRVSQKAHDTMFAGV DRQEIVEALRSDGLFCGLVLPTSIHKEIAAFARYTPCFGNFDRRLEFMAEDHAEAEKRFGRPLLSGHLFEHILGCKAAVA IQNDPLLLDIAAHYLGAQAKLITTRVWWSFPTSEASDADKNRASLGKYHFDLDDWRMLKFFFYLTPVDEGTGPHVYVRGS HNRRAIKHQLTLLVGHPAQEVLKVYGDDSPVTLTGEAGLGFVEDPFGFHMGTVPSRTPRLMMEVGFGVSPPSRRRFHGEP VIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36288; Mature: 36157
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSSPDKSGAASLEAIARNGGVLRRIAVRIPTYLSDIRENPAWLPMFVLARTMPARRMH CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHH WRGAKPVRVSQKAHDTMFAGVDRQEIVEALRSDGLFCGLVLPTSIHKEIAAFARYTPCFG CCCCCCEEECHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCC NFDRRLEFMAEDHAEAEKRFGRPLLSGHLFEHILGCKAAVAIQNDPLLLDIAAHYLGAQA CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCCEEEEEHHHHHCCCE KLITTRVWWSFPTSEASDADKNRASLGKYHFDLDDWRMLKFFFYLTPVDEGTGPHVYVRG EEEEEEEEEECCCCCCCCCCCCHHHHCCEECCCHHHHHEEHHEEEEECCCCCCCEEEEEC SHNRRAIKHQLTLLVGHPAQEVLKVYGDDSPVTLTGEAGLGFVEDPFGFHMGTVPSRTPR CCCCHHHHHEEEEEECCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCH LMMEVGFGVSPPSRRRFHGEPVIR HHHEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TLSSPDKSGAASLEAIARNGGVLRRIAVRIPTYLSDIRENPAWLPMFVLARTMPARRMH CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHH WRGAKPVRVSQKAHDTMFAGVDRQEIVEALRSDGLFCGLVLPTSIHKEIAAFARYTPCFG CCCCCCEEECHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCC NFDRRLEFMAEDHAEAEKRFGRPLLSGHLFEHILGCKAAVAIQNDPLLLDIAAHYLGAQA CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCCEEEEEHHHHHCCCE KLITTRVWWSFPTSEASDADKNRASLGKYHFDLDDWRMLKFFFYLTPVDEGTGPHVYVRG EEEEEEEEEECCCCCCCCCCCCHHHHCCEECCCHHHHHEEHHEEEEECCCCCCCEEEEEC SHNRRAIKHQLTLLVGHPAQEVLKVYGDDSPVTLTGEAGLGFVEDPFGFHMGTVPSRTPR CCCCHHHHHEEEEEECCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCH LMMEVGFGVSPPSRRRFHGEPVIR HHHEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA