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The map label for this gene is visC [H]

Identifier: 13475147

GI number: 13475147

Start: 4983461

End: 4984642

Strand: Direct

Name: visC [H]

Synonym: mlr6159

Alternate gene names: 13475147

Gene position: 4983461-4984642 (Clockwise)

Preceding gene: 13475146

Following gene: 13475148

Centisome position: 70.83

GC content: 62.69

Gene sequence:

>1182_bases
ATGGCCGGCTGTGACGACAGCTTCGACATTATTGTCGTGGGCGCCGGGCCGGTCGGACTTTCCTTCGCCGCATCGCTTGC
CTATAGCCAGCTCAAACTGGCGGTTGTGGAAGGGCAGGCCCTGGAAAGACTGGCAAGTCCGGCTTTCGACGGCCGCGAGA
TCGCGCTCACCCACGCCTCGATTGGAATCCTTCGCGAGCTCGGCGCCTGGGATGTTATCTCCGCTTCGGACAAGTCACCG
CTTCAAGGCGCACGCGTCCTCAACGGATCGAGCCCGTTTGCGTTGTGTTTCGATTCCCCCGGCGGATCCGCGGAACCACT
GGGCGTTCTGGTCCCGAATTGCCAGATCCGCGATGCCCTGTTCAAGATCATCCGCTTGCGGGGCCATGCCCGGCTGCTGT
GCGGCCACTCGGTCGTGCGTGCAACAAACAGCCGTCAAGGAGCAGTGATAACGCTCTCCAATGGCAGGCAGCTGAGCGCT
CGCCTTCTCGTTGCAGCCGATTCGCGTTTTTCCGCCACCCGCAATCTGCTCGGCATCGGCGCCGATATCAATCGGCTTGG
CAACTCGATGCTGATTTGCCGGGTGAGGCACGAGCGCCCCCACCACCAGATCGCGATCGAATGGTTCGATCACCATCAGA
CGGTGGCGATGTTGCCCCTCGCGCCAGGCGTGTCGTCGCTGCTTTTGACTTTGCCCTCAAACGAGGCCGACGGACTGCTT
GCCCTCGACGACGAGTTGTTCCTGAGGGAGTTGACAAAGCGCTGTCGAGGGCGCCTCGGCACCATGAGCCTGGCAAGCCA
ACGCTATATCTATCCGTTGGCCACGACCTGGGCGCACAGGTTCCGGGCGCCGAGCTTCGCATTGATCGGCGACGCTGCCA
TCGGCATGCATCCGGTGACCGCGCATGGCTTCAACATCGGCCTTGGCGGCCAGAAGCAGCTCGCCCGGGGTATAGAGACC
GCATGGCGCGACCGTCGCGACATTGCCGACCCCGACATGCTCCACAGATATGAAAGCCGACTGCGCCTGTCGGCGGCGCC
GCTCTACCATGCTACGAATATCCTCGTCGGACTCTACTCAAGCGAGCATCCGGCGGCACGGCTTGCAAGGCATGTCGGGC
TGCGCCTCGGCCAACATCTTCCCTTTGTCCGTCATGGCATTGCGGCCATGCTGAGGCGGTGA

Upstream 100 bases:

>100_bases
AGGCGATGCGGGCAATAGATCACAGCGCAATCGATGCACGACCTGCGGCTCGACTCCCCCAACATCTCACGAAGAGAACC
GACGCGCTGGCGGCACGCTG

Downstream 100 bases:

>100_bases
ACCCCGGTCACCATAGTCTCATCATCAGCGTGCTGGCGTCGTAGCAGGCGGGCGCGTGTGGTTCGATGGGAGCGGTCGCG
GCTGCGCGGGATCAGCTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MAGCDDSFDIIVVGAGPVGLSFAASLAYSQLKLAVVEGQALERLASPAFDGREIALTHASIGILRELGAWDVISASDKSP
LQGARVLNGSSPFALCFDSPGGSAEPLGVLVPNCQIRDALFKIIRLRGHARLLCGHSVVRATNSRQGAVITLSNGRQLSA
RLLVAADSRFSATRNLLGIGADINRLGNSMLICRVRHERPHHQIAIEWFDHHQTVAMLPLAPGVSSLLLTLPSNEADGLL
ALDDELFLRELTKRCRGRLGTMSLASQRYIYPLATTWAHRFRAPSFALIGDAAIGMHPVTAHGFNIGLGGQKQLARGIET
AWRDRRDIADPDMLHRYESRLRLSAAPLYHATNILVGLYSSEHPAARLARHVGLRLGQHLPFVRHGIAAMLRR

Sequences:

>Translated_393_residues
MAGCDDSFDIIVVGAGPVGLSFAASLAYSQLKLAVVEGQALERLASPAFDGREIALTHASIGILRELGAWDVISASDKSP
LQGARVLNGSSPFALCFDSPGGSAEPLGVLVPNCQIRDALFKIIRLRGHARLLCGHSVVRATNSRQGAVITLSNGRQLSA
RLLVAADSRFSATRNLLGIGADINRLGNSMLICRVRHERPHHQIAIEWFDHHQTVAMLPLAPGVSSLLLTLPSNEADGLL
ALDDELFLRELTKRCRGRLGTMSLASQRYIYPLATTWAHRFRAPSFALIGDAAIGMHPVTAHGFNIGLGGQKQLARGIET
AWRDRRDIADPDMLHRYESRLRLSAAPLYHATNILVGLYSSEHPAARLARHVGLRLGQHLPFVRHGIAAMLRR
>Mature_392_residues
AGCDDSFDIIVVGAGPVGLSFAASLAYSQLKLAVVEGQALERLASPAFDGREIALTHASIGILRELGAWDVISASDKSPL
QGARVLNGSSPFALCFDSPGGSAEPLGVLVPNCQIRDALFKIIRLRGHARLLCGHSVVRATNSRQGAVITLSNGRQLSAR
LLVAADSRFSATRNLLGIGADINRLGNSMLICRVRHERPHHQIAIEWFDHHQTVAMLPLAPGVSSLLLTLPSNEADGLLA
LDDELFLRELTKRCRGRLGTMSLASQRYIYPLATTWAHRFRAPSFALIGDAAIGMHPVTAHGFNIGLGGQKQLARGIETA
WRDRRDIADPDMLHRYESRLRLSAAPLYHATNILVGLYSSEHPAARLARHVGLRLGQHLPFVRHGIAAMLRR

Specific function: Not yet known [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Homo sapiens, GI32967305, Length=442, Percent_Identity=24.8868778280543, Blast_Score=90, Evalue=3e-18,
Organism=Escherichia coli, GI1789273, Length=380, Percent_Identity=31.0526315789474, Blast_Score=155, Evalue=4e-39,
Organism=Escherichia coli, GI1789274, Length=370, Percent_Identity=28.9189189189189, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1786883, Length=374, Percent_Identity=25.1336898395722, Blast_Score=91, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI25146631, Length=427, Percent_Identity=24.824355971897, Blast_Score=98, Evalue=6e-21,
Organism=Drosophila melanogaster, GI19920760, Length=426, Percent_Identity=24.4131455399061, Blast_Score=94, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 42608; Mature: 42477

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGCDDSFDIIVVGAGPVGLSFAASLAYSQLKLAVVEGQALERLASPAFDGREIALTHAS
CCCCCCCCCEEEECCCCCCHHHHHHHHHHHEEEEEECCHHHHHHHCCCCCCCEEEEEHHH
IGILRELGAWDVISASDKSPLQGARVLNGSSPFALCFDSPGGSAEPLGVLVPNCQIRDAL
HHHHHHCCCCCEECCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCEEEECCCHHHHHH
FKIIRLRGHARLLCGHSVVRATNSRQGAVITLSNGRQLSARLLVAADSRFSATRNLLGIG
HHHHHHCCCEEEEECCHHHEECCCCCCEEEEECCCCEEEEEEEEEECCCHHHHHHHEECC
ADINRLGNSMLICRVRHERPHHQIAIEWFDHHQTVAMLPLAPGVSSLLLTLPSNEADGLL
CCHHHCCCEEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCCCEE
ALDDELFLRELTKRCRGRLGTMSLASQRYIYPLATTWAHRFRAPSFALIGDAAIGMHPVT
EECHHHHHHHHHHHHHCCCCCHHHCCCCEEEEHHHHHHHHHCCCCEEEECCCCCCCCCEE
AHGFNIGLGGQKQLARGIETAWRDRRDIADPDMLHRYESRLRLSAAPLYHATNILVGLYS
ECCEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEECCCHHHHCEEEEEECC
SEHPAARLARHVGLRLGQHLPFVRHGIAAMLRR
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
AGCDDSFDIIVVGAGPVGLSFAASLAYSQLKLAVVEGQALERLASPAFDGREIALTHAS
CCCCCCCCEEEECCCCCCHHHHHHHHHHHEEEEEECCHHHHHHHCCCCCCCEEEEEHHH
IGILRELGAWDVISASDKSPLQGARVLNGSSPFALCFDSPGGSAEPLGVLVPNCQIRDAL
HHHHHHCCCCCEECCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCEEEECCCHHHHHH
FKIIRLRGHARLLCGHSVVRATNSRQGAVITLSNGRQLSARLLVAADSRFSATRNLLGIG
HHHHHHCCCEEEEECCHHHEECCCCCCEEEEECCCCEEEEEEEEEECCCHHHHHHHEECC
ADINRLGNSMLICRVRHERPHHQIAIEWFDHHQTVAMLPLAPGVSSLLLTLPSNEADGLL
CCHHHCCCEEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCCCEE
ALDDELFLRELTKRCRGRLGTMSLASQRYIYPLATTWAHRFRAPSFALIGDAAIGMHPVT
EECHHHHHHHHHHHHHCCCCCHHHCCCCEEEEHHHHHHHHHCCCCEEEECCCCCCCCCEE
AHGFNIGLGGQKQLARGIETAWRDRRDIADPDMLHRYESRLRLSAAPLYHATNILVGLYS
ECCEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEECCCHHHHCEEEEEECC
SEHPAARLARHVGLRLGQHLPFVRHGIAAMLRR
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on paired donors, with incorporation or reduction of molecular oxygen; With NADH2 or NADPH2 as one donor, and incorporation of one atom of oxygen [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1339425; 9278503 [H]