| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475064
Identifier: 13475064
GI number: 13475064
Start: 4904890
End: 4905240
Strand: Reverse
Name: 13475064
Synonym: mll6067
Alternate gene names: NA
Gene position: 4905240-4904890 (Counterclockwise)
Preceding gene: 13475065
Following gene: 13475063
Centisome position: 69.72
GC content: 63.53
Gene sequence:
>351_bases TTGGCTATCGAAGCGTTTGCCCCGCCGATGGAAAGCTTTCGACGCGGTCGCGACTTCTCCGCCTGGCTCGGGCTTGTGCC TCTGCAGAAGTCAACCGGCGGCAAGCAGATCCATGGCAAGACCTCGAAGATGGGTCAGCGCGACATCCGCAGACTGCTGA TCATCGGCGCCATGGCCGTGGTGCGATGGACCGCCCGCCGCGGCGCGCCGAAGGGATCGTGGCTGGCCGGCATGATCGGT CGCAAGCCTCGCCTGGTGGTCGCCATCGCGCTGGCTAACAAGATGGCACGAGCTGTATGGGGCATGCTCACGAAGAAGGA GAATTATTGGAATCCGGTGGCGGCAGCCTGA
Upstream 100 bases:
>100_bases AAGAGATCGCCGATCTTGAGAAGAAACTCCATGCGGAAGCGGCAGGGGGTGAGGTGACGAAGCGGCTGCAGACTATGCCG GGGATCGGCCGGTCACGGCC
Downstream 100 bases:
>100_bases TCGGGCCAATCGTCCATCGGTGTTGCGAGGAGGTCGCAAACGGTAAGGGCAAATGATCGATCAGATCGGGATCAGGAAAG CCAGTGTGATTCACGGAGCC
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MAIEAFAPPMESFRRGRDFSAWLGLVPLQKSTGGKQIHGKTSKMGQRDIRRLLIIGAMAVVRWTARRGAPKGSWLAGMIG RKPRLVVAIALANKMARAVWGMLTKKENYWNPVAAA
Sequences:
>Translated_116_residues MAIEAFAPPMESFRRGRDFSAWLGLVPLQKSTGGKQIHGKTSKMGQRDIRRLLIIGAMAVVRWTARRGAPKGSWLAGMIG RKPRLVVAIALANKMARAVWGMLTKKENYWNPVAAA >Mature_115_residues AIEAFAPPMESFRRGRDFSAWLGLVPLQKSTGGKQIHGKTSKMGQRDIRRLLIIGAMAVVRWTARRGAPKGSWLAGMIGR KPRLVVAIALANKMARAVWGMLTKKENYWNPVAAA
Specific function: Required for the transposition of an insertion element (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 20 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003583 - InterPro: IPR003346 - InterPro: IPR002525 [H]
Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]
EC number: NA
Molecular weight: Translated: 12801; Mature: 12670
Theoretical pI: Translated: 12.39; Mature: 12.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIEAFAPPMESFRRGRDFSAWLGLVPLQKSTGGKQIHGKTSKMGQRDIRRLLIIGAMAV CCCCCCCCCHHHHHCCCCCHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHH VRWTARRGAPKGSWLAGMIGRKPRLVVAIALANKMARAVWGMLTKKENYWNPVAAA HHHHHHCCCCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure AIEAFAPPMESFRRGRDFSAWLGLVPLQKSTGGKQIHGKTSKMGQRDIRRLLIIGAMAV CCCCCCCCHHHHHCCCCCHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHH VRWTARRGAPKGSWLAGMIGRKPRLVVAIALANKMARAVWGMLTKKENYWNPVAAA HHHHHHCCCCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]