| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475065
Identifier: 13475065
GI number: 13475065
Start: 4905081
End: 4905914
Strand: Reverse
Name: 13475065
Synonym: mll6068
Alternate gene names: NA
Gene position: 4905914-4905081 (Counterclockwise)
Preceding gene: 13475067
Following gene: 13475064
Centisome position: 69.73
GC content: 60.79
Gene sequence:
>834_bases ATGAAGGAAGTTAGCATTATCGCCGTTGACCTGGCAAAGCAGGCTTTTCAGGTTCATGGCGCCGCGGCTGAGGGGTCGGT TGTCTTTCGCAAGAAGCTGTCGCGTTCGCAGTTTCTGGCGTTCATGAGCCGGCAGCCGGCCTGCCTCGTGGCTATGGAAG CTTGCGCGACGTCACACTATTGGGGGCGCGAGATCATGAAGCTGGGGCACACCGTCCGGCTGATCCCGCCAATTTACGTG AAGCCCTTCGTGAAGCGGCACAAGAATGACGCGGCGGATGCTGAAGCCATTGCGGAAGCCGCATCGCGCCCGACCATGCG CTTTGTTGCCGTGAAGAGCGAGGAGCAGCAGGCCCGGGCGATGATCTTCCGCGCACGCGACCTGCTGGTGCGCCAACGCA CGCAGTTGATCAATGCGCTACGCGGTCATCTGGCCGAATTCGGCATTGTGGTGGCGAAGGGTCCCGTCCATCTCGAGAAG CTGAATGATACGATCGATGAGTTGGAGACGGGACTGCCGCCGATGGTCCGCGAGATCGGGCGGACCTATCTCGATCAAAT TGCCGTCTACACTGAAGAGATCGCCGATCTTGAGAAGAAACTCCATGCGGAAGCGGCAGGGGGTGAGGTGACGAAGCGGC TGCAGACTATGCCGGGGATCGGCCGGTCACGGCCTTGGCTATCGAAGCGTTTGCCCCGCCGATGGAAAGCTTTCGACGCG GTCGCGACTTCTCCGCCTGGCTCGGGCTTGTGCCTCTGCAGAAGTCAACCGGCGGCAAGCAGATCCATGGCAAGACCTCG AAGATGGGTCAGCGCGACATCCGCAGACTGCTGA
Upstream 100 bases:
>100_bases CGCTCCCGCGATTACCCCATGTGGATGGCTCCCGCACCCGACGGCATAGCAATGTGCCAAATTGGTGATGTCGGAATCAT CCAAAGAGGAGAGGGCATCC
Downstream 100 bases:
>100_bases TCATCGGCGCCATGGCCGTGGTGCGATGGACCGCCCGCCGCGGCGCGCCGAAGGGATCGTGGCTGGCCGGCATGATCGGT CGCAAGCCTCGCCTGGTGGT
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MKEVSIIAVDLAKQAFQVHGAAAEGSVVFRKKLSRSQFLAFMSRQPACLVAMEACATSHYWGREIMKLGHTVRLIPPIYV KPFVKRHKNDAADAEAIAEAASRPTMRFVAVKSEEQQARAMIFRARDLLVRQRTQLINALRGHLAEFGIVVAKGPVHLEK LNDTIDELETGLPPMVREIGRTYLDQIAVYTEEIADLEKKLHAEAAGGEVTKRLQTMPGIGRSRPWLSKRLPRRWKAFDA VATSPPGSGLCLCRSQPAASRSMARPRRWVSATSADC
Sequences:
>Translated_277_residues MKEVSIIAVDLAKQAFQVHGAAAEGSVVFRKKLSRSQFLAFMSRQPACLVAMEACATSHYWGREIMKLGHTVRLIPPIYV KPFVKRHKNDAADAEAIAEAASRPTMRFVAVKSEEQQARAMIFRARDLLVRQRTQLINALRGHLAEFGIVVAKGPVHLEK LNDTIDELETGLPPMVREIGRTYLDQIAVYTEEIADLEKKLHAEAAGGEVTKRLQTMPGIGRSRPWLSKRLPRRWKAFDA VATSPPGSGLCLCRSQPAASRSMARPRRWVSATSADC >Mature_277_residues MKEVSIIAVDLAKQAFQVHGAAAEGSVVFRKKLSRSQFLAFMSRQPACLVAMEACATSHYWGREIMKLGHTVRLIPPIYV KPFVKRHKNDAADAEAIAEAASRPTMRFVAVKSEEQQARAMIFRARDLLVRQRTQLINALRGHLAEFGIVVAKGPVHLEK LNDTIDELETGLPPMVREIGRTYLDQIAVYTEEIADLEKKLHAEAAGGEVTKRLQTMPGIGRSRPWLSKRLPRRWKAFDA VATSPPGSGLCLCRSQPAASRSMARPRRWVSATSADC
Specific function: Required for the transposition of an insertion element (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 20 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003583 - InterPro: IPR003346 - InterPro: IPR002525 [H]
Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]
EC number: NA
Molecular weight: Translated: 30768; Mature: 30768
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEVSIIAVDLAKQAFQVHGAAAEGSVVFRKKLSRSQFLAFMSRQPACLVAMEACATSHY CCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH WGREIMKLGHTVRLIPPIYVKPFVKRHKNDAADAEAIAEAASRPTMRFVAVKSEEQQARA HHHHHHHHCCEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHH MIFRARDLLVRQRTQLINALRGHLAEFGIVVAKGPVHLEKLNDTIDELETGLPPMVREIG HHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHH RTYLDQIAVYTEEIADLEKKLHAEAAGGEVTKRLQTMPGIGRSRPWLSKRLPRRWKAFDA HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHH VATSPPGSGLCLCRSQPAASRSMARPRRWVSATSADC HHCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKEVSIIAVDLAKQAFQVHGAAAEGSVVFRKKLSRSQFLAFMSRQPACLVAMEACATSHY CCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH WGREIMKLGHTVRLIPPIYVKPFVKRHKNDAADAEAIAEAASRPTMRFVAVKSEEQQARA HHHHHHHHCCEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHH MIFRARDLLVRQRTQLINALRGHLAEFGIVVAKGPVHLEKLNDTIDELETGLPPMVREIG HHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHH RTYLDQIAVYTEEIADLEKKLHAEAAGGEVTKRLQTMPGIGRSRPWLSKRLPRRWKAFDA HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHH VATSPPGSGLCLCRSQPAASRSMARPRRWVSATSADC HHCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]