Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13475065

Identifier: 13475065

GI number: 13475065

Start: 4905081

End: 4905914

Strand: Reverse

Name: 13475065

Synonym: mll6068

Alternate gene names: NA

Gene position: 4905914-4905081 (Counterclockwise)

Preceding gene: 13475067

Following gene: 13475064

Centisome position: 69.73

GC content: 60.79

Gene sequence:

>834_bases
ATGAAGGAAGTTAGCATTATCGCCGTTGACCTGGCAAAGCAGGCTTTTCAGGTTCATGGCGCCGCGGCTGAGGGGTCGGT
TGTCTTTCGCAAGAAGCTGTCGCGTTCGCAGTTTCTGGCGTTCATGAGCCGGCAGCCGGCCTGCCTCGTGGCTATGGAAG
CTTGCGCGACGTCACACTATTGGGGGCGCGAGATCATGAAGCTGGGGCACACCGTCCGGCTGATCCCGCCAATTTACGTG
AAGCCCTTCGTGAAGCGGCACAAGAATGACGCGGCGGATGCTGAAGCCATTGCGGAAGCCGCATCGCGCCCGACCATGCG
CTTTGTTGCCGTGAAGAGCGAGGAGCAGCAGGCCCGGGCGATGATCTTCCGCGCACGCGACCTGCTGGTGCGCCAACGCA
CGCAGTTGATCAATGCGCTACGCGGTCATCTGGCCGAATTCGGCATTGTGGTGGCGAAGGGTCCCGTCCATCTCGAGAAG
CTGAATGATACGATCGATGAGTTGGAGACGGGACTGCCGCCGATGGTCCGCGAGATCGGGCGGACCTATCTCGATCAAAT
TGCCGTCTACACTGAAGAGATCGCCGATCTTGAGAAGAAACTCCATGCGGAAGCGGCAGGGGGTGAGGTGACGAAGCGGC
TGCAGACTATGCCGGGGATCGGCCGGTCACGGCCTTGGCTATCGAAGCGTTTGCCCCGCCGATGGAAAGCTTTCGACGCG
GTCGCGACTTCTCCGCCTGGCTCGGGCTTGTGCCTCTGCAGAAGTCAACCGGCGGCAAGCAGATCCATGGCAAGACCTCG
AAGATGGGTCAGCGCGACATCCGCAGACTGCTGA

Upstream 100 bases:

>100_bases
CGCTCCCGCGATTACCCCATGTGGATGGCTCCCGCACCCGACGGCATAGCAATGTGCCAAATTGGTGATGTCGGAATCAT
CCAAAGAGGAGAGGGCATCC

Downstream 100 bases:

>100_bases
TCATCGGCGCCATGGCCGTGGTGCGATGGACCGCCCGCCGCGGCGCGCCGAAGGGATCGTGGCTGGCCGGCATGATCGGT
CGCAAGCCTCGCCTGGTGGT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKEVSIIAVDLAKQAFQVHGAAAEGSVVFRKKLSRSQFLAFMSRQPACLVAMEACATSHYWGREIMKLGHTVRLIPPIYV
KPFVKRHKNDAADAEAIAEAASRPTMRFVAVKSEEQQARAMIFRARDLLVRQRTQLINALRGHLAEFGIVVAKGPVHLEK
LNDTIDELETGLPPMVREIGRTYLDQIAVYTEEIADLEKKLHAEAAGGEVTKRLQTMPGIGRSRPWLSKRLPRRWKAFDA
VATSPPGSGLCLCRSQPAASRSMARPRRWVSATSADC

Sequences:

>Translated_277_residues
MKEVSIIAVDLAKQAFQVHGAAAEGSVVFRKKLSRSQFLAFMSRQPACLVAMEACATSHYWGREIMKLGHTVRLIPPIYV
KPFVKRHKNDAADAEAIAEAASRPTMRFVAVKSEEQQARAMIFRARDLLVRQRTQLINALRGHLAEFGIVVAKGPVHLEK
LNDTIDELETGLPPMVREIGRTYLDQIAVYTEEIADLEKKLHAEAAGGEVTKRLQTMPGIGRSRPWLSKRLPRRWKAFDA
VATSPPGSGLCLCRSQPAASRSMARPRRWVSATSADC
>Mature_277_residues
MKEVSIIAVDLAKQAFQVHGAAAEGSVVFRKKLSRSQFLAFMSRQPACLVAMEACATSHYWGREIMKLGHTVRLIPPIYV
KPFVKRHKNDAADAEAIAEAASRPTMRFVAVKSEEQQARAMIFRARDLLVRQRTQLINALRGHLAEFGIVVAKGPVHLEK
LNDTIDELETGLPPMVREIGRTYLDQIAVYTEEIADLEKKLHAEAAGGEVTKRLQTMPGIGRSRPWLSKRLPRRWKAFDA
VATSPPGSGLCLCRSQPAASRSMARPRRWVSATSADC

Specific function: Required for the transposition of an insertion element (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 20 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 30768; Mature: 30768

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEVSIIAVDLAKQAFQVHGAAAEGSVVFRKKLSRSQFLAFMSRQPACLVAMEACATSHY
CCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
WGREIMKLGHTVRLIPPIYVKPFVKRHKNDAADAEAIAEAASRPTMRFVAVKSEEQQARA
HHHHHHHHCCEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHH
MIFRARDLLVRQRTQLINALRGHLAEFGIVVAKGPVHLEKLNDTIDELETGLPPMVREIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHH
RTYLDQIAVYTEEIADLEKKLHAEAAGGEVTKRLQTMPGIGRSRPWLSKRLPRRWKAFDA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHH
VATSPPGSGLCLCRSQPAASRSMARPRRWVSATSADC
HHCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKEVSIIAVDLAKQAFQVHGAAAEGSVVFRKKLSRSQFLAFMSRQPACLVAMEACATSHY
CCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
WGREIMKLGHTVRLIPPIYVKPFVKRHKNDAADAEAIAEAASRPTMRFVAVKSEEQQARA
HHHHHHHHCCEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHH
MIFRARDLLVRQRTQLINALRGHLAEFGIVVAKGPVHLEKLNDTIDELETGLPPMVREIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHH
RTYLDQIAVYTEEIADLEKKLHAEAAGGEVTKRLQTMPGIGRSRPWLSKRLPRRWKAFDA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHH
VATSPPGSGLCLCRSQPAASRSMARPRRWVSATSADC
HHCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]