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The map label for this gene is ydaV [C]

Identifier: 13475041

GI number: 13475041

Start: 4878385

End: 4878909

Strand: Direct

Name: ydaV [C]

Synonym: mlr6037

Alternate gene names: 13475041

Gene position: 4878385-4878909 (Clockwise)

Preceding gene: 13475040

Following gene: 13475048

Centisome position: 69.33

GC content: 63.05

Gene sequence:

>525_bases
ATGAAGGCCGCCCACATCATCGACGAAGCCCGTCTCGGCATCATGCTCAACGACCTCAGATTGCCGACGATCAAGACCCT
GTGGCCGCAATTTGCCGAACAGGCCGATAAGGAAGGCTGGCCCGCCGCCCGGTTCCTCTCGGCCATTGCCGAGCATGAGT
TGGCCGAGCGCGATCGGCGCCGGGTCGAACGTCATCTGGCCGAAGCGCATCTGCCGCCCGGAAAGACACTCGACAGCTTC
GCCTTCGACGCCGTACCCATGGTCTCCAAGGCGCAGGTCATGGCCATGACCGCCGGCGACAGCTGGCTCGCAAAGGGTGC
CAACATCCTGTTGTTTGGCCCGCCCGGCGGCGGAAAGAGCCATCTCGCCGCAGCTATCGGGCTCGCCCTCATCGAGAACG
GCTGGCGCGTGCTGTTCACCCGAACCACCGATCTCGTTCAGAAGCTTCAGGTCGCACGGCGTGAGCTGCAGCTCGAATCC
GCCATCGCAAAGCTCGACAAGTTCGATCTGCTGATCCTCGACTAA

Upstream 100 bases:

>100_bases
TCGGCCCGGATCCCGCACGGCTGCCGACCGTCTCGGTGCAGCTCGCTTCCCTCAACGGCTATGAAGCCCTGATCGGCACG
GCCTATGTGGGAGACGCCGC

Downstream 100 bases:

>100_bases
CGTGCACTGCGCAGAGATGTGGAGCTGACACTGCAAGAGCCCGCAGACGCGCGACTTCCGACGATACCACTCCACATAAC
TGAGCGACTATAGGCGGCGC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKAAHIIDEARLGIMLNDLRLPTIKTLWPQFAEQADKEGWPAARFLSAIAEHELAERDRRRVERHLAEAHLPPGKTLDSF
AFDAVPMVSKAQVMAMTAGDSWLAKGANILLFGPPGGGKSHLAAAIGLALIENGWRVLFTRTTDLVQKLQVARRELQLES
AIAKLDKFDLLILD

Sequences:

>Translated_174_residues
MKAAHIIDEARLGIMLNDLRLPTIKTLWPQFAEQADKEGWPAARFLSAIAEHELAERDRRRVERHLAEAHLPPGKTLDSF
AFDAVPMVSKAQVMAMTAGDSWLAKGANILLFGPPGGGKSHLAAAIGLALIENGWRVLFTRTTDLVQKLQVARRELQLES
AIAKLDKFDLLILD
>Mature_174_residues
MKAAHIIDEARLGIMLNDLRLPTIKTLWPQFAEQADKEGWPAARFLSAIAEHELAERDRRRVERHLAEAHLPPGKTLDSF
AFDAVPMVSKAQVMAMTAGDSWLAKGANILLFGPPGGGKSHLAAAIGLALIENGWRVLFTRTTDLVQKLQVARRELQLES
AIAKLDKFDLLILD

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 19226; Mature: 19226

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAAHIIDEARLGIMLNDLRLPTIKTLWPQFAEQADKEGWPAARFLSAIAEHELAERDRR
CCCHHHHHHHHHCEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
RVERHLAEAHLPPGKTLDSFAFDAVPMVSKAQVMAMTAGDSWLAKGANILLFGPPGGGKS
HHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCHHHHCCCCEEEECCCCCCHH
HLAAAIGLALIENGWRVLFTRTTDLVQKLQVARRELQLESAIAKLDKFDLLILD
HHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
>Mature Secondary Structure
MKAAHIIDEARLGIMLNDLRLPTIKTLWPQFAEQADKEGWPAARFLSAIAEHELAERDRR
CCCHHHHHHHHHCEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
RVERHLAEAHLPPGKTLDSFAFDAVPMVSKAQVMAMTAGDSWLAKGANILLFGPPGGGKS
HHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCHHHHCCCCEEEECCCCCCHH
HLAAAIGLALIENGWRVLFTRTTDLVQKLQVARRELQLESAIAKLDKFDLLILD
HHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]