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The map label for this gene is 13475040

Identifier: 13475040

GI number: 13475040

Start: 4877822

End: 4878388

Strand: Direct

Name: 13475040

Synonym: mlr6036

Alternate gene names: NA

Gene position: 4877822-4878388 (Clockwise)

Preceding gene: 13475039

Following gene: 13475041

Centisome position: 69.33

GC content: 62.79

Gene sequence:

>567_bases
GTGGTCGTGACCGTGTCGCGGACCGGCGGCTTCACCTTGCGCAAGGTCTTCTACACCGTTTCCTCCCGCCTGATCGGACA
TCGGCTTCGCGTCCGGCTGTTCGACGATCGCCTCGAGGTCTTTGTCGGAGGAACACAGCTGATGACGCTTCCCAGAGGCC
GCGGGCATGCGGATGGAAGGCACGATCAGGTCGTCAATTATCGGCACGTCATCCATTCCCTGCGCAAAAAGCCGATGGCG
CTTCTTAATCTCGTCTATCGTGACAAGCTCTTCCCGCAGCAGGATTACCGCAGGGCCTTCGATGTGCTCATTGAGCGGCT
GCCGGACAGGCAGGCCTGCAAGGTGATGGTCGAATTGCTGGCGCTGGCCCATGATCGGGGCTGCGAGCGCGAACTTGCCG
AGCAACTCGCCGAGACCCTCGACGCCGGCGACCTGCCCGATATTGCCCTCTTGCGAACGCTCTTCGGCCCGGATCCCGCA
CGGCTGCCGACCGTCTCGGTGCAGCTCGCTTCCCTCAACGGCTATGAAGCCCTGATCGGCACGGCCTATGTGGGAGACGC
CGCATGA

Upstream 100 bases:

>100_bases
TCGATGAGATCGCCAGCCGGCACAACGCCAATCATGGCAAACGCATCGACGCCCTCATCTGCAGGAGCTCCCCGATCGGC
GGACCAGCGACTTCGAGGAG

Downstream 100 bases:

>100_bases
AGGCCGCCCACATCATCGACGAAGCCCGTCTCGGCATCATGCTCAACGACCTCAGATTGCCGACGATCAAGACCCTGTGG
CCGCAATTTGCCGAACAGGC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MVVTVSRTGGFTLRKVFYTVSSRLIGHRLRVRLFDDRLEVFVGGTQLMTLPRGRGHADGRHDQVVNYRHVIHSLRKKPMA
LLNLVYRDKLFPQQDYRRAFDVLIERLPDRQACKVMVELLALAHDRGCERELAEQLAETLDAGDLPDIALLRTLFGPDPA
RLPTVSVQLASLNGYEALIGTAYVGDAA

Sequences:

>Translated_188_residues
MVVTVSRTGGFTLRKVFYTVSSRLIGHRLRVRLFDDRLEVFVGGTQLMTLPRGRGHADGRHDQVVNYRHVIHSLRKKPMA
LLNLVYRDKLFPQQDYRRAFDVLIERLPDRQACKVMVELLALAHDRGCERELAEQLAETLDAGDLPDIALLRTLFGPDPA
RLPTVSVQLASLNGYEALIGTAYVGDAA
>Mature_188_residues
MVVTVSRTGGFTLRKVFYTVSSRLIGHRLRVRLFDDRLEVFVGGTQLMTLPRGRGHADGRHDQVVNYRHVIHSLRKKPMA
LLNLVYRDKLFPQQDYRRAFDVLIERLPDRQACKVMVELLALAHDRGCERELAEQLAETLDAGDLPDIALLRTLFGPDPA
RLPTVSVQLASLNGYEALIGTAYVGDAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 21151; Mature: 21151

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVTVSRTGGFTLRKVFYTVSSRLIGHRLRVRLFDDRLEVFVGGTQLMTLPRGRGHADGR
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHEECCEEEEEECCCCCCCCCC
HDQVVNYRHVIHSLRKKPMALLNLVYRDKLFPQQDYRRAFDVLIERLPDRQACKVMVELL
HHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ALAHDRGCERELAEQLAETLDAGDLPDIALLRTLFGPDPARLPTVSVQLASLNGYEALIG
HHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHH
TAYVGDAA
HHHCCCCC
>Mature Secondary Structure
MVVTVSRTGGFTLRKVFYTVSSRLIGHRLRVRLFDDRLEVFVGGTQLMTLPRGRGHADGR
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHEECCEEEEEECCCCCCCCCC
HDQVVNYRHVIHSLRKKPMALLNLVYRDKLFPQQDYRRAFDVLIERLPDRQACKVMVELL
HHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ALAHDRGCERELAEQLAETLDAGDLPDIALLRTLFGPDPARLPTVSVQLASLNGYEALIG
HHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHH
TAYVGDAA
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]