Click here to switch to the map view.

The map label for this gene is 13475037

Identifier: 13475037

GI number: 13475037

Start: 4875016

End: 4876230

Strand: Reverse

Name: 13475037

Synonym: mll6033

Alternate gene names: NA

Gene position: 4876230-4875016 (Counterclockwise)

Preceding gene: 13475042

Following gene: 13475030

Centisome position: 69.3

GC content: 59.92

Gene sequence:

>1215_bases
ATGATTCGGAGGTCATGGATGACAGGTGCATCAATCGAGACTACGCTTGAGCTTTGGGCATCATCCCTGCGTGAGGTGAA
AGCCCGTATGCGCGGACTGTTTACGCAGGAGCGAGTTGCAGCATCTGCGAACCTTTTCCTGGACGGCTTGCTGGGTGACG
AGCGCCGTAAGACAGGTTGGATGCGCGCTGAGGCGGCCGGTGATTCCGGCCCGTGGCGGCAACAAGCTATTCTGGGTCGC
GGACGCTGGGACGCGGACGGACTTCGCGACATCGTGCGAGAGTATGTTGTCGAAAACCTCGCCACTGATGATGCGGTCAT
GGTCATCGATGAGACGGGCTTCCTCAAGCAGGGTAAGACATCGTGCGGTGTTGCGCGTCAATATACAGGTTCGGCAGGCA
AGATAACGAACTGCCAGATCGGTGTGTTCGCCGCCTATGTGTCCGTTCGCGGTCATGCCTTTATCGATCGAGCCCTGTAC
TTGCCCAAGAGCTGGACCGGCGATCCGGCAAGGCTTGCAGCCACCCATGTTCCTGAAGCTATAGCCTTCGCTACCAAGCC
AGGCTTGGCTGTCGATATGATACGGCGTGCGTTGGCAGCCGATGTGCCGTTTTCATGGGTGGCCGCAGATGCGGTGTATG
GCGTCGGGGACGTCGAAGGAACCGTGCGCCGAGCCTGCAAAGGCTACGTTCTTGGGGTTAAATCGGACCATCATTTCGGC
TCCTGGTCGGGCAAGCCTCCGGTCGCCGGCACAGCTCAGGAGATCGCCCGTGATCTCGATCCAAGTGCATGGCAGCGTCT
TTCCGCCGGAGAGGGCACCAAAGGTGCGCGGCTTCATGACTGGGCCTACTGCGAACTCGCCGATCTCGATGCCGACGAAT
ATAACGAGACGAAATCGGGACTTTGGACCCGTGGCCTCCTGATCCGGCGCAATATCAGCGACGGTGATCTCGCATTCTTC
ACGACATGGTGCCCGGCCGGGACGGGCATCCAGACGCTCGTTTCCGTTGAAGGCCATCGCTGGGCGATCGAAGACAGCTT
CGAGGCCGCCAAGAACGAGCTCGGACTCGATCACAACGAAACCCGGTCATGGCATGGCTGGCATCGCCACGTCTCCCTCG
TCATGCTCGCCTTCGCCATGATGGCGGCGATCCGGTACCGCGCCAATGACGCGACGCCCCAAAAAAGACCGCGGATGCCG
ACCATCAGGATCTGA

Upstream 100 bases:

>100_bases
TTGCGAGGAGGAGCAGCTATGATCGATGTCTACGAAAGCGCGACTGACGACCTAGCATTACAGTTGCATATCTATCTGTG
GTCTGAATCTATGGGTCTCC

Downstream 100 bases:

>100_bases
TCCGCTGGTCTATCCAGGAAGTCCGGCGCATGCCACCAGGCTTGCCCAGCGCCGCATAAAGCCCGCCGACGTCATTGCGT
GGTCATGCTGGAGGCGCGCC

Product: transposase

Products: NA

Alternate protein names: IS4 Family Transposase; ISXo8 Transposase; Transposase IS4 Family Protein; ISRSO17-Transposase Protein; LOW QUALITY PROTEIN IS4 Family Transposase; FOG Transposase; Transposase IS; Isrso17-Transposase Protein; Transposase ISRS; LOW QUALITY PROTEIN Transposase; Transposase-Like Protein; Transposase Helper Protein B Fragment; Transposase IS4 Protein; Transposase Of; IS Sequence; Transposase Protein

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MIRRSWMTGASIETTLELWASSLREVKARMRGLFTQERVAASANLFLDGLLGDERRKTGWMRAEAAGDSGPWRQQAILGR
GRWDADGLRDIVREYVVENLATDDAVMVIDETGFLKQGKTSCGVARQYTGSAGKITNCQIGVFAAYVSVRGHAFIDRALY
LPKSWTGDPARLAATHVPEAIAFATKPGLAVDMIRRALAADVPFSWVAADAVYGVGDVEGTVRRACKGYVLGVKSDHHFG
SWSGKPPVAGTAQEIARDLDPSAWQRLSAGEGTKGARLHDWAYCELADLDADEYNETKSGLWTRGLLIRRNISDGDLAFF
TTWCPAGTGIQTLVSVEGHRWAIEDSFEAAKNELGLDHNETRSWHGWHRHVSLVMLAFAMMAAIRYRANDATPQKRPRMP
TIRI

Sequences:

>Translated_404_residues
MIRRSWMTGASIETTLELWASSLREVKARMRGLFTQERVAASANLFLDGLLGDERRKTGWMRAEAAGDSGPWRQQAILGR
GRWDADGLRDIVREYVVENLATDDAVMVIDETGFLKQGKTSCGVARQYTGSAGKITNCQIGVFAAYVSVRGHAFIDRALY
LPKSWTGDPARLAATHVPEAIAFATKPGLAVDMIRRALAADVPFSWVAADAVYGVGDVEGTVRRACKGYVLGVKSDHHFG
SWSGKPPVAGTAQEIARDLDPSAWQRLSAGEGTKGARLHDWAYCELADLDADEYNETKSGLWTRGLLIRRNISDGDLAFF
TTWCPAGTGIQTLVSVEGHRWAIEDSFEAAKNELGLDHNETRSWHGWHRHVSLVMLAFAMMAAIRYRANDATPQKRPRMP
TIRI
>Mature_404_residues
MIRRSWMTGASIETTLELWASSLREVKARMRGLFTQERVAASANLFLDGLLGDERRKTGWMRAEAAGDSGPWRQQAILGR
GRWDADGLRDIVREYVVENLATDDAVMVIDETGFLKQGKTSCGVARQYTGSAGKITNCQIGVFAAYVSVRGHAFIDRALY
LPKSWTGDPARLAATHVPEAIAFATKPGLAVDMIRRALAADVPFSWVAADAVYGVGDVEGTVRRACKGYVLGVKSDHHFG
SWSGKPPVAGTAQEIARDLDPSAWQRLSAGEGTKGARLHDWAYCELADLDADEYNETKSGLWTRGLLIRRNISDGDLAFF
TTWCPAGTGIQTLVSVEGHRWAIEDSFEAAKNELGLDHNETRSWHGWHRHVSLVMLAFAMMAAIRYRANDATPQKRPRMP
TIRI

Specific function: Unknown

COG id: COG5659

COG function: function code L; FOG: Transposase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44552; Mature: 44552

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRSWMTGASIETTLELWASSLREVKARMRGLFTQERVAASANLFLDGLLGDERRKTGW
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHCCC
MRAEAAGDSGPWRQQAILGRGRWDADGLRDIVREYVVENLATDDAVMVIDETGFLKQGKT
EEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
SCGVARQYTGSAGKITNCQIGVFAAYVSVRGHAFIDRALYLPKSWTGDPARLAATHVPEA
CCCCHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHCCHH
IAFATKPGLAVDMIRRALAADVPFSWVAADAVYGVGDVEGTVRRACKGYVLGVKSDHHFG
HHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHCCEEEEECCCCCCC
SWSGKPPVAGTAQEIARDLDPSAWQRLSAGEGTKGARLHDWAYCELADLDADEYNETKSG
CCCCCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCCCEECCEEEEEEECCCCHHCCCHHCC
LWTRGLLIRRNISDGDLAFFTTWCPAGTGIQTLVSVEGHRWAIEDSFEAAKNELGLDHNE
HHHCCEEEEECCCCCCEEEEEEECCCCCCHHHHEEECCCEEEECCHHHHHHHHCCCCCCC
TRSWHGWHRHVSLVMLAFAMMAAIRYRANDATPQKRPRMPTIRI
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIRRSWMTGASIETTLELWASSLREVKARMRGLFTQERVAASANLFLDGLLGDERRKTGW
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHCCC
MRAEAAGDSGPWRQQAILGRGRWDADGLRDIVREYVVENLATDDAVMVIDETGFLKQGKT
EEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
SCGVARQYTGSAGKITNCQIGVFAAYVSVRGHAFIDRALYLPKSWTGDPARLAATHVPEA
CCCCHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHCCHH
IAFATKPGLAVDMIRRALAADVPFSWVAADAVYGVGDVEGTVRRACKGYVLGVKSDHHFG
HHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHCCEEEEECCCCCCC
SWSGKPPVAGTAQEIARDLDPSAWQRLSAGEGTKGARLHDWAYCELADLDADEYNETKSG
CCCCCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCCCEECCEEEEEEECCCCHHCCCHHCC
LWTRGLLIRRNISDGDLAFFTTWCPAGTGIQTLVSVEGHRWAIEDSFEAAKNELGLDHNE
HHHCCEEEEECCCCCCEEEEEEECCCCCCHHHHEEECCCEEEECCHHHHHHHHCCCCCCC
TRSWHGWHRHVSLVMLAFAMMAAIRYRANDATPQKRPRMPTIRI
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA