| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474918
Identifier: 13474918
GI number: 13474918
Start: 4770742
End: 4771368
Strand: Reverse
Name: 13474918
Synonym: mll8741
Alternate gene names: NA
Gene position: 4771368-4770742 (Counterclockwise)
Preceding gene: 13474929
Following gene: 13474915
Centisome position: 67.81
GC content: 64.11
Gene sequence:
>627_bases ATGGAAGTTACCATCATTGGAATCGATCTCGCAAAGCGGGTCTTCCAGGTTCACGGCGCGGCGAGTGACGGGAAGGTTGT CTTTCGCAAGAAGCTGTCGCGCGCAGTTGCTGCCGTTTCTCGCCGGACAGCCCCGGTGCACGGTGGCGATGGAAGCGCGA CCGCCCACGACTGGGGGCGTACGATCGGCGGGCTCGGGCATGCCGTCCGGCTCCTGCCGCCGGTCTATGTGAAGTCCTTT GTAAAGCGGCACGCGGAAGCGGCCCTCAGGCCGACAATGCGCTTCGTGGCTGTCAAAACCGAGGAGCAAGAGGCGCGGTC GATGATCTTCCGCACGCGCGACCTCTTGGTGCGCCAGCGCACGCAGCTGATAAACGCCCTGCGCGGCCACCTCGCCGAAG CACGGGGTCGTCGCCCCACACGGCCCGGCCCACGTGAAGCGCCGTGCGGATGCAATCGAAGACGAGGAAGGCCTCATCCA GCCGATCGTCCGCGACGTTGGTCGTCTCTACCTCCAGCAGATCGCCATCTACAGCGAGAAGATCGCCGAGCTCGAGAAGA CCCTCCCTTGGCTGTAGATCATCTGGGAGCTCGTCCCGCTGGATTTGGCGCGCTCCACTCTATCTGA
Upstream 100 bases:
>100_bases GCTAGTTGTCAAAATCTGATGGAGTAGATGCCCCCTCCGACGCCATCGCAATGTGCCAGTTTGGTGATTGCCAGAATCGA CCAAGACAGAGACGGCATCC
Downstream 100 bases:
>100_bases GTTTCAGCCATCTTGCCTTCGAGCCCGCTGCGCGGCTTGCCGGCCAGTTTTCCTCCTGCCATCAGCCGCGCCCAGATCAG CCCTGCCTTGTCGTCGAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MEVTIIGIDLAKRVFQVHGAASDGKVVFRKKLSRAVAAVSRRTAPVHGGDGSATAHDWGRTIGGLGHAVRLLPPVYVKSF VKRHAEAALRPTMRFVAVKTEEQEARSMIFRTRDLLVRQRTQLINALRGHLAEARGRRPTRPGPREAPCGCNRRRGRPHP ADRPRRWSSLPPADRHLQREDRRAREDPPLAVDHLGARPAGFGALHSI
Sequences:
>Translated_208_residues MEVTIIGIDLAKRVFQVHGAASDGKVVFRKKLSRAVAAVSRRTAPVHGGDGSATAHDWGRTIGGLGHAVRLLPPVYVKSF VKRHAEAALRPTMRFVAVKTEEQEARSMIFRTRDLLVRQRTQLINALRGHLAEARGRRPTRPGPREAPCGCNRRRGRPHP ADRPRRWSSLPPADRHLQREDRRAREDPPLAVDHLGARPAGFGALHSI >Mature_208_residues MEVTIIGIDLAKRVFQVHGAASDGKVVFRKKLSRAVAAVSRRTAPVHGGDGSATAHDWGRTIGGLGHAVRLLPPVYVKSF VKRHAEAALRPTMRFVAVKTEEQEARSMIFRTRDLLVRQRTQLINALRGHLAEARGRRPTRPGPREAPCGCNRRRGRPHP ADRPRRWSSLPPADRHLQREDRRAREDPPLAVDHLGARPAGFGALHSI
Specific function: Required for the transposition of an insertion element (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 20 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003583 - InterPro: IPR003346 - InterPro: IPR002525 [H]
Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]
EC number: NA
Molecular weight: Translated: 23109; Mature: 23109
Theoretical pI: Translated: 12.20; Mature: 12.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVTIIGIDLAKRVFQVHGAASDGKVVFRKKLSRAVAAVSRRTAPVHGGDGSATAHDWGR CEEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH TIGGLGHAVRLLPPVYVKSFVKRHAEAALRPTMRFVAVKTEEQEARSMIFRTRDLLVRQR HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHH TQLINALRGHLAEARGRRPTRPGPREAPCGCNRRRGRPHPADRPRRWSSLPPADRHLQRE HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH DRRAREDPPLAVDHLGARPAGFGALHSI HHHHCCCCCCCHHHCCCCCCCCCHHHCC >Mature Secondary Structure MEVTIIGIDLAKRVFQVHGAASDGKVVFRKKLSRAVAAVSRRTAPVHGGDGSATAHDWGR CEEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH TIGGLGHAVRLLPPVYVKSFVKRHAEAALRPTMRFVAVKTEEQEARSMIFRTRDLLVRQR HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHH TQLINALRGHLAEARGRRPTRPGPREAPCGCNRRRGRPHPADRPRRWSSLPPADRHLQRE HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH DRRAREDPPLAVDHLGARPAGFGALHSI HHHHCCCCCCCHHHCCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]