| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474914
Identifier: 13474914
GI number: 13474914
Start: 4768040
End: 4768951
Strand: Reverse
Name: 13474914
Synonym: mll5900
Alternate gene names: NA
Gene position: 4768951-4768040 (Counterclockwise)
Preceding gene: 13474915
Following gene: 13474913
Centisome position: 67.78
GC content: 63.71
Gene sequence:
>912_bases GTGGGTGGTCTGGGCGCTCGCCACCTTTACGGCTCGGCGCTCGGCGAACATCTGGTGTTCAAGGGCGGCACGTCGCTGTC CAAAGCCTATCAGGTTATCCAGCGGTTTTCCGAGGACGTCGACCTAACATACGACATCCGGGCGATTGCACCCGACTTGG TGGGCGACGACGGCGAAGCGTTGCCGGAGACCCGTAGCGAGGAAAAACGCTGGTCCAGCGAGGTGCGCAAGCGCCTGCCC AATTGGGTTGAAGGAAGCGTTCAGCCGATCATCGCAGATGCGCTCGCGGCTGAAGCTTTGGCGGCCGCCATCCGCGTCGA GGGCGAGAAGCTGTTCATCGATTACGCAGCCGCGACGGCTGGCTCCGGCTATGTGGCGCCGAGCGTGATCCTCGAATTCG GAGCACGATCGACGGGCGAGCCCGCGAGCTTGCGCGACATCGCCTGCGACGCGTCTGGCCTGATCGAGGGCGTGACCTTT CCCACGGCTCGTCCACGCGTGATGCATGCGGAGCGAACCTTCTGGGAGAAGGCGACGGCCATCCATGTCTTCTGCCTGCA GGAGCGCCTGCGCGGCGATCGCTTTGCTCGTCACTGGCACGATGTCGCGCGGTTGGACGAAACCGGTTTTACCCCGTCCG CCTTTGCTGATCGCGATCTGGCGAACGCAGTGGCGCGCCACAAGACCATGTTCTTCGCCGAGAAAGCGCCCGATCGAACG CCCATCGATTACGCGGCGGCTGTCAACGGCGGTCTGCGGCTTGTGCCCGCAGGCGATGGTCTGAAGGCGCTTGAAGAGGA CTACGCCCGCATGGTCGACGACGGGCTTCTTCTGGAAGACGCGGAGCCTTTCGAAGCGCTGATGGCGCGATGTGCCGATA TCGCCGAGCGAGCCAATTACATCCGCGAATAG
Upstream 100 bases:
>100_bases GCTGATCCCTTTCTCCACCTCCCGATCGAGGATCGGCGGGAGGCGCTCGGCGCGCGGCCGATCGGTCCGGCCGGCCGGCG CATCTCCTCGAGAAGGACGT
Downstream 100 bases:
>100_bases AAAAAACTGGGGGGACGGCGCCGTGCGAATTTCGCGGATCAAAATTACAAACTTCGCCAATCGGCGCGCTGCGGCCGGGA ATGCTCGATGCGCTGATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MGGLGARHLYGSALGEHLVFKGGTSLSKAYQVIQRFSEDVDLTYDIRAIAPDLVGDDGEALPETRSEEKRWSSEVRKRLP NWVEGSVQPIIADALAAEALAAAIRVEGEKLFIDYAAATAGSGYVAPSVILEFGARSTGEPASLRDIACDASGLIEGVTF PTARPRVMHAERTFWEKATAIHVFCLQERLRGDRFARHWHDVARLDETGFTPSAFADRDLANAVARHKTMFFAEKAPDRT PIDYAAAVNGGLRLVPAGDGLKALEEDYARMVDDGLLLEDAEPFEALMARCADIAERANYIRE
Sequences:
>Translated_303_residues MGGLGARHLYGSALGEHLVFKGGTSLSKAYQVIQRFSEDVDLTYDIRAIAPDLVGDDGEALPETRSEEKRWSSEVRKRLP NWVEGSVQPIIADALAAEALAAAIRVEGEKLFIDYAAATAGSGYVAPSVILEFGARSTGEPASLRDIACDASGLIEGVTF PTARPRVMHAERTFWEKATAIHVFCLQERLRGDRFARHWHDVARLDETGFTPSAFADRDLANAVARHKTMFFAEKAPDRT PIDYAAAVNGGLRLVPAGDGLKALEEDYARMVDDGLLLEDAEPFEALMARCADIAERANYIRE >Mature_302_residues GGLGARHLYGSALGEHLVFKGGTSLSKAYQVIQRFSEDVDLTYDIRAIAPDLVGDDGEALPETRSEEKRWSSEVRKRLPN WVEGSVQPIIADALAAEALAAAIRVEGEKLFIDYAAATAGSGYVAPSVILEFGARSTGEPASLRDIACDASGLIEGVTFP TARPRVMHAERTFWEKATAIHVFCLQERLRGDRFARHWHDVARLDETGFTPSAFADRDLANAVARHKTMFFAEKAPDRTP IDYAAAVNGGLRLVPAGDGLKALEEDYARMVDDGLLLEDAEPFEALMARCADIAERANYIRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33096; Mature: 32964
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGLGARHLYGSALGEHLVFKGGTSLSKAYQVIQRFSEDVDLTYDIRAIAPDLVGDDGEA CCCCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCCEEEHHHHCHHHCCCCCCC LPETRSEEKRWSSEVRKRLPNWVEGSVQPIIADALAAEALAAAIRVEGEKLFIDYAAATA CCCCCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHCC GSGYVAPSVILEFGARSTGEPASLRDIACDASGLIEGVTFPTARPRVMHAERTFWEKATA CCCCCHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH IHVFCLQERLRGDRFARHWHDVARLDETGFTPSAFADRDLANAVARHKTMFFAEKAPDRT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC PIDYAAAVNGGLRLVPAGDGLKALEEDYARMVDDGLLLEDAEPFEALMARCADIAERANY CCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHH IRE HCC >Mature Secondary Structure GGLGARHLYGSALGEHLVFKGGTSLSKAYQVIQRFSEDVDLTYDIRAIAPDLVGDDGEA CCCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCCEEEHHHHCHHHCCCCCCC LPETRSEEKRWSSEVRKRLPNWVEGSVQPIIADALAAEALAAAIRVEGEKLFIDYAAATA CCCCCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHCC GSGYVAPSVILEFGARSTGEPASLRDIACDASGLIEGVTFPTARPRVMHAERTFWEKATA CCCCCHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH IHVFCLQERLRGDRFARHWHDVARLDETGFTPSAFADRDLANAVARHKTMFFAEKAPDRT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC PIDYAAAVNGGLRLVPAGDGLKALEEDYARMVDDGLLLEDAEPFEALMARCADIAERANY CCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHH IRE HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA