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The map label for this gene is rep [C]

Identifier: 13474913

GI number: 13474913

Start: 4767573

End: 4768082

Strand: Reverse

Name: rep [C]

Synonym: mll5898

Alternate gene names: 13474913

Gene position: 4768082-4767573 (Counterclockwise)

Preceding gene: 13474914

Following gene: 13474905

Centisome position: 67.77

GC content: 63.73

Gene sequence:

>510_bases
ATGTGCCGATATCGCCGAGCGAGCCAATTACATCCGCGAATAGAAAAAACTGGGGGGACGGCGCCGTGCGAATTTCGCGG
ATCAAAATTACAAACTTCGCCAATCGGCGCGCTGCGGCCGGGAATGCTCGATGCGCTGATGGCGGCAGAGCCAAGCCTCG
CCGATCAACGCGAACAGGTGGTGCGCATGTCGGCGGCGCTCGCTGTCGGCGGGCCGCTCGCCGACCTGGATCTGGCGAGC
CTCGGTGGACGCGACGCGTCGCCTCTCCATCTTAATCTGTTGACGCCGCACTCGGCAAAGGGCTGCGAATATGATGTCGT
GATCATGGCGGGACTCGATCTGGGCGGTTTGCCCTGGCGCAACGAGCAGCCGGCGGCGCGACGCGAAAGCCGACGGCTGT
TCTATGTTGGCCTGACGCGGGCCCGCGACGAGATCCATATGCTGTATTCCGGTTACGTCGATACCGGCCGCGGGCGAAGG
TTCGGCACCCCGTCCCGTGCAAGAGCGTAG

Upstream 100 bases:

>100_bases
CAGGCGATGGTCTGAAGGCGCTTGAAGAGGACTACGCCCGCATGGTCGACGACGGGCTTCTTCTGGAAGACGCGGAGCCT
TTCGAAGCGCTGATGGCGCG

Downstream 100 bases:

>100_bases
CCGTCGACAAGTGTGGAGATCAGCTCCTTTGCATTGGGAAACCGTTATTTGAGGGTCGGGTCGAGCTTATCGCGCAACCA
GTCGCCGAGGACGCTAACGG

Product: hypothetical protein

Products: NA

Alternate protein names: ATP-Dependent DNA Helicase; ATP-Dependent DNA Helicase PcrA; ATP-Dependent DNA Helicase UvrD/PcrA; ATP-Dependent DNA Helicase Rep

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MCRYRRASQLHPRIEKTGGTAPCEFRGSKLQTSPIGALRPGMLDALMAAEPSLADQREQVVRMSAALAVGGPLADLDLAS
LGGRDASPLHLNLLTPHSAKGCEYDVVIMAGLDLGGLPWRNEQPAARRESRRLFYVGLTRARDEIHMLYSGYVDTGRGRR
FGTPSRARA

Sequences:

>Translated_169_residues
MCRYRRASQLHPRIEKTGGTAPCEFRGSKLQTSPIGALRPGMLDALMAAEPSLADQREQVVRMSAALAVGGPLADLDLAS
LGGRDASPLHLNLLTPHSAKGCEYDVVIMAGLDLGGLPWRNEQPAARRESRRLFYVGLTRARDEIHMLYSGYVDTGRGRR
FGTPSRARA
>Mature_169_residues
MCRYRRASQLHPRIEKTGGTAPCEFRGSKLQTSPIGALRPGMLDALMAAEPSLADQREQVVRMSAALAVGGPLADLDLAS
LGGRDASPLHLNLLTPHSAKGCEYDVVIMAGLDLGGLPWRNEQPAARRESRRLFYVGLTRARDEIHMLYSGYVDTGRGRR
FGTPSRARA

Specific function: Rep Helicase Is A Single-Stranded DNA-Dependent ATPase Involved In DNA Replication; It Can Initiate Unwinding At A Nick In The DNA. It Binds To The Single-Stranded DNA And Acts In A Progressive Fashion Along The DNA In The 3' To 5' Direction. [C]

COG id: COG0210

COG function: function code L; Superfamily I DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.6.1.- [C]

Molecular weight: Translated: 18414; Mature: 18414

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCRYRRASQLHPRIEKTGGTAPCEFRGSKLQTSPIGALRPGMLDALMAAEPSLADQREQV
CCCCCCCHHCCCCHHHCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHH
VRMSAALAVGGPLADLDLASLGGRDASPLHLNLLTPHSAKGCEYDVVIMAGLDLGGLPWR
HHHHHHHHCCCCCCCCHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCC
NEQPAARRESRRLFYVGLTRARDEIHMLYSGYVDTGRGRRFGTPSRARA
CCCCHHHHHCCEEEEEEECCCCHHEEEEHCCEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MCRYRRASQLHPRIEKTGGTAPCEFRGSKLQTSPIGALRPGMLDALMAAEPSLADQREQV
CCCCCCCHHCCCCHHHCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHH
VRMSAALAVGGPLADLDLASLGGRDASPLHLNLLTPHSAKGCEYDVVIMAGLDLGGLPWR
HHHHHHHHCCCCCCCCHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCC
NEQPAARRESRRLFYVGLTRARDEIHMLYSGYVDTGRGRRFGTPSRARA
CCCCHHHHHCCEEEEEEECCCCHHEEEEHCCEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on acid anhydrides; In phosphorus-containing anhydrides [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA