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The map label for this gene is fixB [H]

Identifier: 13474881

GI number: 13474881

Start: 4733921

End: 4735027

Strand: Reverse

Name: fixB [H]

Synonym: mll5861

Alternate gene names: 13474881

Gene position: 4735027-4733921 (Counterclockwise)

Preceding gene: 13474882

Following gene: 13474880

Centisome position: 67.3

GC content: 60.98

Gene sequence:

>1107_bases
ATGTCGAACGCTAACCGCGAAGCCCCTCCTTCCGCCGGCCGTGCCGGCATCAAGAGGGAATTGCCTGAGCACTTTAGGGA
CTATCGGCACGTCTGGGTTTTCATCGAACTGGAACGCAGCGAGGTCCATCCCGTGTCCTTCGAACTGCTTGGCGAAGGCC
GCAAGCTCGCCGACAAGCTAGGCATCCAGCTTGCGGGGATCGTGCTTGGACCGCCGGGTGACGCGACGCAGCATGCCGTT
GCCGAGGCCTTCGCTTACGGCGCCGACCTTGTCTACCTCGTCGAGGCACCGTTGCTTGCCGACTATCGCAACGAGCCTTT
CACTAAGGCGATGACGGATCTGGTCAATACCCACAAGCCGGAAATCCTGCTTCTCGGTGCGACCACGCTCGGCAGGGATC
TCGCTGGCTCAGTAGCGACGACCTTGCTGACAGGGCTCACTGCCGACTGTACCGAACTCGATGTAGATGTCGACGGTTCG
CTCGCCGCGACCCGTCCGACTTTCGGGGGTTCCTTGCTGTGCACGATCTATACGCTCAACTACCGGCCGCAGATGGCCAC
GGTACGACCGAGGGTTATGGCCATGCCACCGCGGACGGACAAGCCGGTCGGGCGTGTCATCCGGCACAAGCTGTCAATGA
CCGAGGAAGAGATCATCACCAAAGTCCTTGGCTTCAACCTCGATCGCCAATCGGCAAAGGCAAATCTCGCCTACGCCGAC
ATCGTGGTTGCCGGAGGCCTCGGTCTCGGCTCAGCGGAGAATTTGCAGCTTGTGAAGAATCTAGCGCGGGCAATCGGCGC
CGAATATGGCTGTTCGCGCCCGTTGGTCCAGAAGGGCTGGATGCCTGCCGATCGGCAGGTTGGCCAAACGGGCAAGACCA
TCCGGCCAAAGCTTTACATAGCGGCCGGGATTTCCGGCGCCATTCAGCATCGGGTTGGCGTGGAGGGGGCTGATTTGATC
GTAGCCATCAACACCGACCCGAACGCCCCGATCTTCGAATTTGCCCATCTCGGCATCGTCACCGACGCAATCCGTTTCCT
GCCGGCATTGACGGAAGCTTTCACCCGGCGGCTGTCGCCGCACAGCCACGACAAGCTTGCGAGCTAA

Upstream 100 bases:

>100_bases
TCGCTGACGAACTGATCGCCTCAATCTTTACCCGCCAGCCAGCGCTGGAACACGAACTCGCCTTCGACGGCGGCCAGTGA
CGGGACGGCAAGGAGAGATG

Downstream 100 bases:

>100_bases
GGGAGAGGGCCATGATCGAGGAAGAATTCGACGCCATCGTCGTCGGGGCCGGTATGTCCGGAAACGCGGCCGCCTACACC
ATGGCAAGCCAGGGCCTGAC

Product: nitrogen fixation protein,fixB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MSNANREAPPSAGRAGIKRELPEHFRDYRHVWVFIELERSEVHPVSFELLGEGRKLADKLGIQLAGIVLGPPGDATQHAV
AEAFAYGADLVYLVEAPLLADYRNEPFTKAMTDLVNTHKPEILLLGATTLGRDLAGSVATTLLTGLTADCTELDVDVDGS
LAATRPTFGGSLLCTIYTLNYRPQMATVRPRVMAMPPRTDKPVGRVIRHKLSMTEEEIITKVLGFNLDRQSAKANLAYAD
IVVAGGLGLGSAENLQLVKNLARAIGAEYGCSRPLVQKGWMPADRQVGQTGKTIRPKLYIAAGISGAIQHRVGVEGADLI
VAINTDPNAPIFEFAHLGIVTDAIRFLPALTEAFTRRLSPHSHDKLAS

Sequences:

>Translated_368_residues
MSNANREAPPSAGRAGIKRELPEHFRDYRHVWVFIELERSEVHPVSFELLGEGRKLADKLGIQLAGIVLGPPGDATQHAV
AEAFAYGADLVYLVEAPLLADYRNEPFTKAMTDLVNTHKPEILLLGATTLGRDLAGSVATTLLTGLTADCTELDVDVDGS
LAATRPTFGGSLLCTIYTLNYRPQMATVRPRVMAMPPRTDKPVGRVIRHKLSMTEEEIITKVLGFNLDRQSAKANLAYAD
IVVAGGLGLGSAENLQLVKNLARAIGAEYGCSRPLVQKGWMPADRQVGQTGKTIRPKLYIAAGISGAIQHRVGVEGADLI
VAINTDPNAPIFEFAHLGIVTDAIRFLPALTEAFTRRLSPHSHDKLAS
>Mature_367_residues
SNANREAPPSAGRAGIKRELPEHFRDYRHVWVFIELERSEVHPVSFELLGEGRKLADKLGIQLAGIVLGPPGDATQHAVA
EAFAYGADLVYLVEAPLLADYRNEPFTKAMTDLVNTHKPEILLLGATTLGRDLAGSVATTLLTGLTADCTELDVDVDGSL
AATRPTFGGSLLCTIYTLNYRPQMATVRPRVMAMPPRTDKPVGRVIRHKLSMTEEEIITKVLGFNLDRQSAKANLAYADI
VVAGGLGLGSAENLQLVKNLARAIGAEYGCSRPLVQKGWMPADRQVGQTGKTIRPKLYIAAGISGAIQHRVGVEGADLIV
AINTDPNAPIFEFAHLGIVTDAIRFLPALTEAFTRRLSPHSHDKLAS

Specific function: May play a role in a redox process involved in nitrogen fixation [H]

COG id: COG2025

COG function: function code C; Electron transfer flavoprotein, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF alpha-subunit/fixB family [H]

Homologues:

Organism=Homo sapiens, GI189181759, Length=235, Percent_Identity=36.1702127659575, Blast_Score=132, Evalue=5e-31,
Organism=Homo sapiens, GI4503607, Length=235, Percent_Identity=36.1702127659575, Blast_Score=131, Evalue=9e-31,
Organism=Escherichia coli, GI1787990, Length=332, Percent_Identity=31.9277108433735, Blast_Score=138, Evalue=5e-34,
Organism=Escherichia coli, GI1786226, Length=129, Percent_Identity=50.3875968992248, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI87082157, Length=115, Percent_Identity=39.1304347826087, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17506929, Length=329, Percent_Identity=30.0911854103343, Blast_Score=132, Evalue=4e-31,
Organism=Saccharomyces cerevisiae, GI6325261, Length=193, Percent_Identity=33.160621761658, Blast_Score=100, Evalue=3e-22,
Organism=Drosophila melanogaster, GI17136898, Length=327, Percent_Identity=29.6636085626911, Blast_Score=139, Evalue=4e-33,
Organism=Drosophila melanogaster, GI24652801, Length=327, Percent_Identity=29.6636085626911, Blast_Score=139, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001308
- InterPro:   IPR014730
- InterPro:   IPR014731
- InterPro:   IPR018206
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF; PF00766 ETF_alpha [H]

EC number: NA

Molecular weight: Translated: 39713; Mature: 39582

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS00696 ETF_ALPHA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNANREAPPSAGRAGIKRELPEHFRDYRHVWVFIELERSEVHPVSFELLGEGRKLADKL
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCEEHEECCCCHHHHHHH
GIQLAGIVLGPPGDATQHAVAEAFAYGADLVYLVEAPLLADYRNEPFTKAMTDLVNTHKP
CCEEEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCHHHHHHHHHHCCCC
EILLLGATTLGRDLAGSVATTLLTGLTADCTELDVDVDGSLAATRPTFGGSLLCTIYTLN
CEEEEECHHHCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEECCCCCCCEEEEEEEEEC
YRPQMATVRPRVMAMPPRTDKPVGRVIRHKLSMTEEEIITKVLGFNLDRQSAKANLAYAD
CCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHCCCEEEE
IVVAGGLGLGSAENLQLVKNLARAIGAEYGCSRPLVQKGWMPADRQVGQTGKTIRPKLYI
EEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHCCCCCCCCCEEEE
AAGISGAIQHRVGVEGADLIVAINTDPNAPIFEFAHLGIVTDAIRFLPALTEAFTRRLSP
EECCCHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HSHDKLAS
CCCCCCCC
>Mature Secondary Structure 
SNANREAPPSAGRAGIKRELPEHFRDYRHVWVFIELERSEVHPVSFELLGEGRKLADKL
CCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCEEHEECCCCHHHHHHH
GIQLAGIVLGPPGDATQHAVAEAFAYGADLVYLVEAPLLADYRNEPFTKAMTDLVNTHKP
CCEEEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCHHHHHHHHHHCCCC
EILLLGATTLGRDLAGSVATTLLTGLTADCTELDVDVDGSLAATRPTFGGSLLCTIYTLN
CEEEEECHHHCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEECCCCCCCEEEEEEEEEC
YRPQMATVRPRVMAMPPRTDKPVGRVIRHKLSMTEEEIITKVLGFNLDRQSAKANLAYAD
CCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHCCCEEEE
IVVAGGLGLGSAENLQLVKNLARAIGAEYGCSRPLVQKGWMPADRQVGQTGKTIRPKLYI
EEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHCCCCCCCCCEEEE
AAGISGAIQHRVGVEGADLIVAINTDPNAPIFEFAHLGIVTDAIRFLPALTEAFTRRLSP
EECCCHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HSHDKLAS
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1850088 [H]