Click here to switch to the map view.

The map label for this gene is fixA [H]

Identifier: 13474882

GI number: 13474882

Start: 4735048

End: 4735899

Strand: Reverse

Name: fixA [H]

Synonym: mll5862

Alternate gene names: 13474882

Gene position: 4735899-4735048 (Counterclockwise)

Preceding gene: 13474883

Following gene: 13474881

Centisome position: 67.31

GC content: 62.91

Gene sequence:

>852_bases
ATGCACATTGTAATCTGTATCAAGCAGGTGCCGGACTCCGCGCAGATACGTGTCCACCCGGTGACGAACACGATCATGCG
CCAGGGCGTGCCGACCATCATCAACCCTTACGACCTGTTCGCCCTCGAAGAGGCACTGAGATTGCGCGACGCCCATGGCG
GCGAGGTCACCGTGCTTACGATGGGTCCGCCGATGGCAGAAGATGCGCTGCGCAAGGCGCTCACCTATGGCGCCGACCGC
GCGGTACTCTTGACCGACCGCTGTTTTGCCGGCTCCGACACGCTGGCGACCTCCTTCGCGCTTTCTCGGGCAATCGTGAG
AATTGGCGAGACCTTCGGCGCGCCGGACATCGTCTTCGCCGGCAAGCAGACGATTGACGGCGATACCGCCCAGGTCGGGC
CCGGCATCGCCAAGCGCCTCGGCCTCCTGCAGTTCACCTATGTGGCGAAGATCGACTCTATCGATGTCGATGCTCGCGAG
ATCACCGTCAAGCGCCGTTCGGAAGGCGGTACGCAGATGCTGAAAAGCAGGCTGCCTTGCCTCATCACAATGCTGGAAGG
CACCAACGAAATCCGCAGAGGCTCGCTCGAGGACGCCATGCGCGCCGCGCGCAGCCAGATCGTGAAATGGAGCGCGGCCG
AAGCTGGCATTGAGGACCTCAACAAATGCGGCCTGCGCGGCTCGCCGACGGTCGTCAAGCGCGTTTTCGCCCCTACCACG
CGGGCGGAAAAGGCGACGCAGATCGACATGACCGACAAGACGCAGCACGACCTCGCTGACGAACTGATCGCCTCAATCTT
TACCCGCCAGCCAGCGCTGGAACACGAACTCGCCTTCGACGGCGGCCAGTGA

Upstream 100 bases:

>100_bases
GTCAAAAGGAAACAGAGCAACGCAAAGCGGTTGGCACGAATGATGCTGCGAAGGAGATGAACGCCAGGGCCGCTTGCGGA
TTGGAGCCGAGAAGGACGCA

Downstream 100 bases:

>100_bases
CGGGACGGCAAGGAGAGATGATGTCGAACGCTAACCGCGAAGCCCCTCCTTCCGCCGGCCGTGCCGGCATCAAGAGGGAA
TTGCCTGAGCACTTTAGGGA

Product: nitrogen fixation protein,fixA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MHIVICIKQVPDSAQIRVHPVTNTIMRQGVPTIINPYDLFALEEALRLRDAHGGEVTVLTMGPPMAEDALRKALTYGADR
AVLLTDRCFAGSDTLATSFALSRAIVRIGETFGAPDIVFAGKQTIDGDTAQVGPGIAKRLGLLQFTYVAKIDSIDVDARE
ITVKRRSEGGTQMLKSRLPCLITMLEGTNEIRRGSLEDAMRAARSQIVKWSAAEAGIEDLNKCGLRGSPTVVKRVFAPTT
RAEKATQIDMTDKTQHDLADELIASIFTRQPALEHELAFDGGQ

Sequences:

>Translated_283_residues
MHIVICIKQVPDSAQIRVHPVTNTIMRQGVPTIINPYDLFALEEALRLRDAHGGEVTVLTMGPPMAEDALRKALTYGADR
AVLLTDRCFAGSDTLATSFALSRAIVRIGETFGAPDIVFAGKQTIDGDTAQVGPGIAKRLGLLQFTYVAKIDSIDVDARE
ITVKRRSEGGTQMLKSRLPCLITMLEGTNEIRRGSLEDAMRAARSQIVKWSAAEAGIEDLNKCGLRGSPTVVKRVFAPTT
RAEKATQIDMTDKTQHDLADELIASIFTRQPALEHELAFDGGQ
>Mature_283_residues
MHIVICIKQVPDSAQIRVHPVTNTIMRQGVPTIINPYDLFALEEALRLRDAHGGEVTVLTMGPPMAEDALRKALTYGADR
AVLLTDRCFAGSDTLATSFALSRAIVRIGETFGAPDIVFAGKQTIDGDTAQVGPGIAKRLGLLQFTYVAKIDSIDVDARE
ITVKRRSEGGTQMLKSRLPCLITMLEGTNEIRRGSLEDAMRAARSQIVKWSAAEAGIEDLNKCGLRGSPTVVKRVFAPTT
RAEKATQIDMTDKTQHDLADELIASIFTRQPALEHELAFDGGQ

Specific function: May play a role in a redox process involved in nitrogen fixation [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=220, Percent_Identity=28.6363636363636, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI62420877, Length=211, Percent_Identity=28.9099526066351, Blast_Score=84, Evalue=2e-16,
Organism=Escherichia coli, GI87081682, Length=219, Percent_Identity=27.8538812785388, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI25141345, Length=227, Percent_Identity=34.3612334801762, Blast_Score=103, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6321646, Length=218, Percent_Identity=28.4403669724771, Blast_Score=73, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24651147, Length=218, Percent_Identity=29.3577981651376, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24651145, Length=218, Percent_Identity=29.3577981651376, Blast_Score=86, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 30772; Mature: 30772

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIVICIKQVPDSAQIRVHPVTNTIMRQGVPTIINPYDLFALEEALRLRDAHGGEVTVLT
CEEEEEEEECCCCCCEEEEECHHHHHHCCCCCEECCHHHHHHHHHHHHHCCCCCEEEEEE
MGPPMAEDALRKALTYGADRAVLLTDRCFAGSDTLATSFALSRAIVRIGETFGAPDIVFA
CCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEC
GKQTIDGDTAQVGPGIAKRLGLLQFTYVAKIDSIDVDAREITVKRRSEGGTQMLKSRLPC
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCHHHEEEECCCCCHHHHHHHCCCE
LITMLEGTNEIRRGSLEDAMRAARSQIVKWSAAEAGIEDLNKCGLRGSPTVVKRVFAPTT
EEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC
RAEKATQIDMTDKTQHDLADELIASIFTRQPALEHELAFDGGQ
CCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCC
>Mature Secondary Structure
MHIVICIKQVPDSAQIRVHPVTNTIMRQGVPTIINPYDLFALEEALRLRDAHGGEVTVLT
CEEEEEEEECCCCCCEEEEECHHHHHHCCCCCEECCHHHHHHHHHHHHHCCCCCEEEEEE
MGPPMAEDALRKALTYGADRAVLLTDRCFAGSDTLATSFALSRAIVRIGETFGAPDIVFA
CCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEC
GKQTIDGDTAQVGPGIAKRLGLLQFTYVAKIDSIDVDAREITVKRRSEGGTQMLKSRLPC
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCHHHEEEECCCCCHHHHHHHCCCE
LITMLEGTNEIRRGSLEDAMRAARSQIVKWSAAEAGIEDLNKCGLRGSPTVVKRVFAPTT
EEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC
RAEKATQIDMTDKTQHDLADELIASIFTRQPALEHELAFDGGQ
CCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424 [H]