Click here to switch to the map view.

The map label for this gene is 13474862

Identifier: 13474862

GI number: 13474862

Start: 4712712

End: 4713743

Strand: Reverse

Name: 13474862

Synonym: mll5838

Alternate gene names: NA

Gene position: 4713743-4712712 (Counterclockwise)

Preceding gene: 13474863

Following gene: 13474861

Centisome position: 66.99

GC content: 60.56

Gene sequence:

>1032_bases
ATGGCGAAGCGACCCATAATTGCTGATATCGCCCGGGAAGCCGGGGTTAGTGTTGCCACCGTTGACCGAGTTCTGAATGC
CCGTCATCCGGTGCGGAAGGAGACTGCGCAGCGGGTCTTAGCGGCGGCACAGGCCATCGGATATCACGCCGCAGGTCTTA
TCAAGCAGCGCCTGCAGCCGGACCTGCCGCAATATCGGCTTGGCTTCATCTTGAGAAAACCGACTCACCACTTCTACCAG
GGCTTCGCGCGTGAGGTCGAAGCGGCGGTCAACGCGGCGAAGTGCTTCCATGGCACTTCGCTCATCGAATTCGCGCCGTC
GCACATGCCATGCGACCTTATTCCATTGCTCAAGGAATTCGGAGCGCGCTGCCACGCGATCGCCATGGTGGCGCCGGACC
ATCCGGCGATCACGGCAGCCGTCCAAGAACTCAAGGCAAAAGGCATCCCCGTTTTCTCGCTGCTTTCCGATTTCGCCGAA
GGTGTTCGTGAGGGTTATATCGGCCTCGACAACCGCAAGGTCGGGCGGACGACAGCGTGGATGCTTTCAAAGGTCGCAAG
ACGGCCGGGCAAGGTGGCGGTTTTTGTCGGCAGCCACCGTTTTCAGGGGCAGGAGCTGCGGGAGGTCGGCTTTCGCTCCT
ATTTCCGTGAGAATGCACCGGCATTCGAGCTGCTCGATCCGCTCGTGAACCTTGAGGCACGGCAGATCACCTACGAGGCC
ACGCTGGATCTCATGCAACGGGAACCCGAGCTCACCGGCTTCTATGTGGCCGGCGGAGGTATGGAGGGAGCGATCTCCGC
GCTCCGTGAAGAAGGCGAAAGCCGGGGTCTCGTCGCGATCGTTAACGAGATCACGCCGGAGTCACGGGCTGCACTCGCAG
ATGGCATGATCACGATGTCGGTCGCCACGCCCCAGCGCCTGCTTTGCCAGGAACTGATGACGCTGATGGCCCAGGCCATC
AAGGTCGGCACTTCGGAGACGCTTGGGCAGACTTTTCTGCCGTTTGAGATCTATCTGCCGGAAAACATCTGA

Upstream 100 bases:

>100_bases
CAGAATTCGGTAGCGAACAGGATCAATGCAGGAATGACAGATTTTACTGAATCGACCTTTGCCGGATTTCTTCTTGATGT
CGTTTAATCAGACTCGAACA

Downstream 100 bases:

>100_bases
AAAACTGATAAAATACTATCATGAGAGCCTAATTTCCTTTCATTCATGAAAGAAAAGCAGCGGGAGTTTGATTGACTCAC
CTGCCTCATTCCGGTCTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: LacI Family Transcription Regulator; Regulatory Protein LacI; LacI Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator Protein; Transcriptional Regulator Protein LacI Family; Regulatory Protein LacI Family; LacI Regulatory Protein; LacI Family Regulatory Protein; Transcriptional Regulator LacI Family Protein; HTH-Type Transcriptional Regulator MalR; Transcriptional Regulator Protein Laci-Family; ABC-Type Sugar Transport System Periplasmic Component; Regulatory Protein; Sugar ABC Transporter Periplasmic Protein; Laci-Related Transcriptional Regulator Protein; LacI Family Regulatory; Transcription Regulator Protein; HTH-Type Transcriptional Repressor Purr; Laci-Family Transcription Regulator; HTH-Type Transcriptional Repressor PurR; Transcriptional Regulatory Protein LacI Family; Transcription Regulator

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MAKRPIIADIAREAGVSVATVDRVLNARHPVRKETAQRVLAAAQAIGYHAAGLIKQRLQPDLPQYRLGFILRKPTHHFYQ
GFAREVEAAVNAAKCFHGTSLIEFAPSHMPCDLIPLLKEFGARCHAIAMVAPDHPAITAAVQELKAKGIPVFSLLSDFAE
GVREGYIGLDNRKVGRTTAWMLSKVARRPGKVAVFVGSHRFQGQELREVGFRSYFRENAPAFELLDPLVNLEARQITYEA
TLDLMQREPELTGFYVAGGGMEGAISALREEGESRGLVAIVNEITPESRAALADGMITMSVATPQRLLCQELMTLMAQAI
KVGTSETLGQTFLPFEIYLPENI

Sequences:

>Translated_343_residues
MAKRPIIADIAREAGVSVATVDRVLNARHPVRKETAQRVLAAAQAIGYHAAGLIKQRLQPDLPQYRLGFILRKPTHHFYQ
GFAREVEAAVNAAKCFHGTSLIEFAPSHMPCDLIPLLKEFGARCHAIAMVAPDHPAITAAVQELKAKGIPVFSLLSDFAE
GVREGYIGLDNRKVGRTTAWMLSKVARRPGKVAVFVGSHRFQGQELREVGFRSYFRENAPAFELLDPLVNLEARQITYEA
TLDLMQREPELTGFYVAGGGMEGAISALREEGESRGLVAIVNEITPESRAALADGMITMSVATPQRLLCQELMTLMAQAI
KVGTSETLGQTFLPFEIYLPENI
>Mature_342_residues
AKRPIIADIAREAGVSVATVDRVLNARHPVRKETAQRVLAAAQAIGYHAAGLIKQRLQPDLPQYRLGFILRKPTHHFYQG
FAREVEAAVNAAKCFHGTSLIEFAPSHMPCDLIPLLKEFGARCHAIAMVAPDHPAITAAVQELKAKGIPVFSLLSDFAEG
VREGYIGLDNRKVGRTTAWMLSKVARRPGKVAVFVGSHRFQGQELREVGFRSYFRENAPAFELLDPLVNLEARQITYEAT
LDLMQREPELTGFYVAGGGMEGAISALREEGESRGLVAIVNEITPESRAALADGMITMSVATPQRLLCQELMTLMAQAIK
VGTSETLGQTFLPFEIYLPENI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37648; Mature: 37517

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRPIIADIAREAGVSVATVDRVLNARHPVRKETAQRVLAAAQAIGYHAAGLIKQRLQP
CCCCCHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DLPQYRLGFILRKPTHHFYQGFAREVEAAVNAAKCFHGTSLIEFAPSHMPCDLIPLLKEF
CCCHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHH
GARCHAIAMVAPDHPAITAAVQELKAKGIPVFSLLSDFAEGVREGYIGLDNRKVGRTTAW
CCCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
MLSKVARRPGKVAVFVGSHRFQGQELREVGFRSYFRENAPAFELLDPLVNLEARQITYEA
HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHH
TLDLMQREPELTGFYVAGGGMEGAISALREEGESRGLVAIVNEITPESRAALADGMITMS
HHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEEHHCCCHHHHHHHCCCEEEE
VATPQRLLCQELMTLMAQAIKVGTSETLGQTFLPFEIYLPENI
ECCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEECCCCC
>Mature Secondary Structure 
AKRPIIADIAREAGVSVATVDRVLNARHPVRKETAQRVLAAAQAIGYHAAGLIKQRLQP
CCCCHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DLPQYRLGFILRKPTHHFYQGFAREVEAAVNAAKCFHGTSLIEFAPSHMPCDLIPLLKEF
CCCHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHH
GARCHAIAMVAPDHPAITAAVQELKAKGIPVFSLLSDFAEGVREGYIGLDNRKVGRTTAW
CCCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
MLSKVARRPGKVAVFVGSHRFQGQELREVGFRSYFRENAPAFELLDPLVNLEARQITYEA
HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHH
TLDLMQREPELTGFYVAGGGMEGAISALREEGESRGLVAIVNEITPESRAALADGMITMS
HHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEEHHCCCHHHHHHHCCCEEEE
VATPQRLLCQELMTLMAQAIKVGTSETLGQTFLPFEIYLPENI
ECCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA