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The map label for this gene is tnpA [H]

Identifier: 13474839

GI number: 13474839

Start: 4689622

End: 4690218

Strand: Reverse

Name: tnpA [H]

Synonym: mll5813

Alternate gene names: 13474839

Gene position: 4690218-4689622 (Counterclockwise)

Preceding gene: 13474840

Following gene: 13474838

Centisome position: 66.66

GC content: 61.31

Gene sequence:

>597_bases
GTGAGCGTCGGTTACGGTGTCGCCACAAGCGATCAAGCATACCAGTCGACCCAGCATCAGGCTGCGCTGCCGTGTCCACC
GCGCGCTACTAGCGCTCACCAGATCGGCTGGATGAGAACCTTCCATGCCCGGTCGGAGACCTATCGCGCGGCGCAAGCAT
GCATCACCGATGCGCACACCCGGCATCCACATTCTCGATTTTGGGGCAATGGAACGACCGCGTCATCCGATGGGCAGTTC
TTTCGCGCGAGCGACCGAGCGGCGAAGCGCGGCGACGTCAATCTGCACTATGGCAGCGAGCCGGGCTCGAAGTTCTATAG
CCATCTGTCAGATCAGTACGGCTACTTCAGCATCCTGCCGATCAGCCCGACCGAAAGCGAGGCAGCCTATGTGCTCGGTG
GGCTGTTCGACCAGGACACGATCCTCGACATCCAGGAACACTTCACCGATACGGGCGGCGCGAGCGATCACGTCTTCGGG
CTGTTTGCCCTGATCGGCAAACGCTTCGCGCCGCGACTACGCAACCTCAAGGACCGGAAGTTCCGCACGTTCTCCGAAGC
GATGAGCGCTCCTTTTGGCGATGCAACCCGAGGTTAG

Upstream 100 bases:

>100_bases
AGCCCCATACGTAAATGACCCTGCTCGCTTAAGACCGCTCACCAGCCGTCAGCGGTGGCAGCCAATCGGCAGCTCTAACC
ATGATCTCCGAATTGGAAAG

Downstream 100 bases:

>100_bases
GGATGAATTGCAAAAGGCTCAAGACTGTTCGGCTTGCCGTCGATTCCGGCCGACTGCTCGGCCGTTAATTTCACATAATT
TCACATTCCAAATAAGACAC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MSVGYGVATSDQAYQSTQHQAALPCPPRATSAHQIGWMRTFHARSETYRAAQACITDAHTRHPHSRFWGNGTTASSDGQF
FRASDRAAKRGDVNLHYGSEPGSKFYSHLSDQYGYFSILPISPTESEAAYVLGGLFDQDTILDIQEHFTDTGGASDHVFG
LFALIGKRFAPRLRNLKDRKFRTFSEAMSAPFGDATRG

Sequences:

>Translated_198_residues
MSVGYGVATSDQAYQSTQHQAALPCPPRATSAHQIGWMRTFHARSETYRAAQACITDAHTRHPHSRFWGNGTTASSDGQF
FRASDRAAKRGDVNLHYGSEPGSKFYSHLSDQYGYFSILPISPTESEAAYVLGGLFDQDTILDIQEHFTDTGGASDHVFG
LFALIGKRFAPRLRNLKDRKFRTFSEAMSAPFGDATRG
>Mature_197_residues
SVGYGVATSDQAYQSTQHQAALPCPPRATSAHQIGWMRTFHARSETYRAAQACITDAHTRHPHSRFWGNGTTASSDGQFF
RASDRAAKRGDVNLHYGSEPGSKFYSHLSDQYGYFSILPISPTESEAAYVLGGLFDQDTILDIQEHFTDTGGASDHVFGL
FALIGKRFAPRLRNLKDRKFRTFSEAMSAPFGDATRG

Specific function: Required for transposition of transposon Tn3926 [H]

COG id: COG4644

COG function: function code L; Transposase and inactivated derivatives, TnpA family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 7 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002513 [H]

Pfam domain/function: PF01526 Transposase_7 [H]

EC number: NA

Molecular weight: Translated: 21845; Mature: 21714

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVGYGVATSDQAYQSTQHQAALPCPPRATSAHQIGWMRTFHARSETYRAAQACITDAHT
CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RHPHSRFWGNGTTASSDGQFFRASDRAAKRGDVNLHYGSEPGSKFYSHLSDQYGYFSILP
CCCCHHHCCCCCCCCCCCCEEECCCCHHHCCCCEEEECCCCHHHHHHHHHHCCCEEEEEE
ISPTESEAAYVLGGLFDQDTILDIQEHFTDTGGASDHVFGLFALIGKRFAPRLRNLKDRK
CCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHH
FRTFSEAMSAPFGDATRG
HHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SVGYGVATSDQAYQSTQHQAALPCPPRATSAHQIGWMRTFHARSETYRAAQACITDAHT
CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RHPHSRFWGNGTTASSDGQFFRASDRAAKRGDVNLHYGSEPGSKFYSHLSDQYGYFSILP
CCCCHHHCCCCCCCCCCCCEEECCCCHHHCCCCEEEECCCCHHHHHHHHHHCCCEEEEEE
ISPTESEAAYVLGGLFDQDTILDIQEHFTDTGGASDHVFGLFALIGKRFAPRLRNLKDRK
CCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHH
FRTFSEAMSAPFGDATRG
HHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2537961 [H]