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The map label for this gene is rbsB [C]

Identifier: 13474800

GI number: 13474800

Start: 4648719

End: 4649681

Strand: Reverse

Name: rbsB [C]

Synonym: mll5768

Alternate gene names: 13474800

Gene position: 4649681-4648719 (Counterclockwise)

Preceding gene: 13474801

Following gene: 13474799

Centisome position: 66.08

GC content: 61.47

Gene sequence:

>963_bases
ATGAAGTTGAAGAGCATCCTGATTGCAGCTTTGGCGACGGCCGCCTTGTCAAGCGCGTCGTACGCCGAAGACAAGAAGAC
CGTCGCCTACATCGCCCCATCGCTCGACATTTCCTATTGGCAATGGGTCGGCTACGGCGTGAAGGAGAAGGCCAAGGAAC
TCGGCATGGACTATGTCGAGTACACGTCGGAAAACTCACCCGCCAAGCAGATGGACAATGCCAGGACCGCGGTGACCAAA
GGCGTCTCGGCCATCGTGATCGGCCCCGTCAGCTCGACATCGACACCGCCGCTGCTCGACTATCTGGCGAAGCAGAAAGT
GCCGATCGCATTCGCCGGCATCGGGCCGCAGCCAGGCCTCACCAACTACACATGCTCGGTCACCGCCAACAACTATGAGA
CCGGCAAGGCGCAAGGCAAATTCACCTGCGAGCTCGCCAAGGAGCGTGGCGGCAACAAGGTTGGCATGCTGTCGCTGCCG
CAGGATCGGGAGAATGCGCAGAAATATCTCAAGGGCGCCAAGGAAGCCTTCGCCGCCAACGGGTGCGACCTCGTCCAGAT
ACTGGAAACACGCGGCCTCACCATCAACGAAGCCGTTACCCAGGCAAACGACCTCTTAACCGCCAATCCCGACGTCAAGG
CCATTTACGGTATGTATGACGAAGCCGGCACCGGCGCCGCCAAGGTTGCCGAGACCCGCGGCCTGACCGGCAAGATCGGC
ATTACCGTTGCAGACGGCTCGCCCACGACGATCGCGCTGCTCAAGAAGGGAGCGATCCAGGGCATCTTCTTTCAGGAGGC
GGTCGGCCAAGGCATCGACGGCACCCAACAGGTCTACAACGCCTTGACGGGCGCGCCGGTGACCCAGGACCTGGCCCTGG
TCATGCCGCTCGTTACCGCCGACAAGGTCGACAGTCCCGAGGCCAAGAAGGTCATCGCCCGCGTCTTTCCCCCGAGCAAC
TGA

Upstream 100 bases:

>100_bases
TGGCAAGGCTCCGTCACAGGCGCCGCAATCCTGCTCGCGGTTTTGATCGACCGCTTCAGCAACAAGAACCGCATCTAGAT
CATCAACGGGAGGAACCAAG

Downstream 100 bases:

>100_bases
CCGCCACCCAATGGACCCGCCGGCAGAGGCCGGCGGGTCCAGATCCCGAGCGAGGAATCCTGACCGTGGCCGAGCTGCCG
TTCATCGATCCGCACCATCA

Product: ABC transporter periplasmic-binding protein

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MKLKSILIAALATAALSSASYAEDKKTVAYIAPSLDISYWQWVGYGVKEKAKELGMDYVEYTSENSPAKQMDNARTAVTK
GVSAIVIGPVSSTSTPPLLDYLAKQKVPIAFAGIGPQPGLTNYTCSVTANNYETGKAQGKFTCELAKERGGNKVGMLSLP
QDRENAQKYLKGAKEAFAANGCDLVQILETRGLTINEAVTQANDLLTANPDVKAIYGMYDEAGTGAAKVAETRGLTGKIG
ITVADGSPTTIALLKKGAIQGIFFQEAVGQGIDGTQQVYNALTGAPVTQDLALVMPLVTADKVDSPEAKKVIARVFPPSN

Sequences:

>Translated_320_residues
MKLKSILIAALATAALSSASYAEDKKTVAYIAPSLDISYWQWVGYGVKEKAKELGMDYVEYTSENSPAKQMDNARTAVTK
GVSAIVIGPVSSTSTPPLLDYLAKQKVPIAFAGIGPQPGLTNYTCSVTANNYETGKAQGKFTCELAKERGGNKVGMLSLP
QDRENAQKYLKGAKEAFAANGCDLVQILETRGLTINEAVTQANDLLTANPDVKAIYGMYDEAGTGAAKVAETRGLTGKIG
ITVADGSPTTIALLKKGAIQGIFFQEAVGQGIDGTQQVYNALTGAPVTQDLALVMPLVTADKVDSPEAKKVIARVFPPSN
>Mature_320_residues
MKLKSILIAALATAALSSASYAEDKKTVAYIAPSLDISYWQWVGYGVKEKAKELGMDYVEYTSENSPAKQMDNARTAVTK
GVSAIVIGPVSSTSTPPLLDYLAKQKVPIAFAGIGPQPGLTNYTCSVTANNYETGKAQGKFTCELAKERGGNKVGMLSLP
QDRENAQKYLKGAKEAFAANGCDLVQILETRGLTINEAVTQANDLLTANPDVKAIYGMYDEAGTGAAKVAETRGLTGKIG
ITVADGSPTTIALLKKGAIQGIFFQEAVGQGIDGTQQVYNALTGAPVTQDLALVMPLVTADKVDSPEAKKVIARVFPPSN

Specific function: Probably part of the binding-protein-dependent transport system y4mIJK. This system probably transports a sugar [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790192, Length=253, Percent_Identity=25.296442687747, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: 3940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 1520 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 33691; Mature: 33691

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKSILIAALATAALSSASYAEDKKTVAYIAPSLDISYWQWVGYGVKEKAKELGMDYVE
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHCCHHHH
YTSENSPAKQMDNARTAVTKGVSAIVIGPVSSTSTPPLLDYLAKQKVPIAFAGIGPQPGL
HCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCCCCC
TNYTCSVTANNYETGKAQGKFTCELAKERGGNKVGMLSLPQDRENAQKYLKGAKEAFAAN
CCEEEEEEECCCCCCCCCCCEEEEEHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCC
GCDLVQILETRGLTINEAVTQANDLLTANPDVKAIYGMYDEAGTGAAKVAETRGLTGKIG
CCHHHHHHHHCCCCHHHHHHHHCCCEECCCCCEEEEECCCCCCCCHHHHHHHCCCCEEEE
ITVADGSPTTIALLKKGAIQGIFFQEAVGQGIDGTQQVYNALTGAPVTQDLALVMPLVTA
EEEECCCCCEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHC
DKVDSPEAKKVIARVFPPSN
CCCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MKLKSILIAALATAALSSASYAEDKKTVAYIAPSLDISYWQWVGYGVKEKAKELGMDYVE
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHCCHHHH
YTSENSPAKQMDNARTAVTKGVSAIVIGPVSSTSTPPLLDYLAKQKVPIAFAGIGPQPGL
HCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCCCCC
TNYTCSVTANNYETGKAQGKFTCELAKERGGNKVGMLSLPQDRENAQKYLKGAKEAFAAN
CCEEEEEEECCCCCCCCCCCEEEEEHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCC
GCDLVQILETRGLTINEAVTQANDLLTANPDVKAIYGMYDEAGTGAAKVAETRGLTGKIG
CCHHHHHHHHCCCCHHHHHHHHCCCEECCCCCEEEEECCCCCCCCHHHHHHHCCCCEEEE
ITVADGSPTTIALLKKGAIQGIFFQEAVGQGIDGTQQVYNALTGAPVTQDLALVMPLVTA
EEEECCCCCEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHC
DKVDSPEAKKVIARVFPPSN
CCCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]