| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474799
Identifier: 13474799
GI number: 13474799
Start: 4647760
End: 4648653
Strand: Reverse
Name: 13474799
Synonym: mll5767
Alternate gene names: NA
Gene position: 4648653-4647760 (Counterclockwise)
Preceding gene: 13474800
Following gene: 13474798
Centisome position: 66.07
GC content: 59.96
Gene sequence:
>894_bases GTGGCCGAGCTGCCGTTCATCGATCCGCACCATCATCTCTGGGACCTGGAAGTTAATTACTATCCGTGGCTGACCGACGG GGTTAAGCCATCGGCCTTCGGCGACTACGAAGCGATCCGCACGAACTATCGTCTCGACGACTATCTTGAGGACGCCAGGA ACCAGAACCTCGTTAAATCGGTGCATCTGGACGTTGGGTTCGATCCCAGCGATCCGGTCGGGGAGACGCGCTGGCTGCAG GAGATCGCCAACAAGCGAGGCTTTCCGCATGGCATCGTCGGCTATGCCGACCTGTCCAAACCCGATGTCGGCGAACTCCT CGACCGGCACATGGAGTATCCGAACTTCCGGGGTATCAGGCAGTCGATGAACTATCATGCAGACCCCGCCAAGACCTATC AGGCGCGGCCAGAGGTCAGCCGGACGCCAGAATGGCGGCGCGGCTTCCGGGAACTGGCAAAGCGCCGGCTAAGCTTCGAC TTGCAGCTCTATTATCCGCAGATGGAAGAGTTTCTCCAGCTCGCGCATGACTTTCCCGACGTCCAGATCATTCTCAACCA CACCGGCATGCAGGTCGACGGCCCTAAGCATTTCAACGCCTGGAAAAAGGGCATGCACCGATTGGCCCAAGCGCCGAACG TCGCCTGCAAGATCTCCGGTCTCGGCATGGGCGACTGGTCCTGGACCACGGCGTCGATCCGCCCCTATGTAGAGGAGGCG ATCGCGGCCTTTGGTGTCGGCCGCAGCATGTTCGCGACTAACTTCCCGGTCGACAAGCTTTTCTCGAGCTTCGACGCGGT CGTGAACGCCTTCAAGGAGATCACACGATACTACCCGCACGAGGAGCGGCTTGCGTTGTTCCATGACAACGCAGCCCGGC ACTACCGGCTCTAG
Upstream 100 bases:
>100_bases AGGTCATCGCCCGCGTCTTTCCCCCGAGCAACTGACCGCCACCCAATGGACCCGCCGGCAGAGGCCGGCGGGTCCAGATC CCGAGCGAGGAATCCTGACC
Downstream 100 bases:
>100_bases ATCATCCGCCGAAACAATTGAAACAGCAGGAGACTTTGACATGTTGCTGAAGGGCAAGGCCGTGGTGATTTCGGGTGCCG CGAGCCCCCGGGGAATTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MAELPFIDPHHHLWDLEVNYYPWLTDGVKPSAFGDYEAIRTNYRLDDYLEDARNQNLVKSVHLDVGFDPSDPVGETRWLQ EIANKRGFPHGIVGYADLSKPDVGELLDRHMEYPNFRGIRQSMNYHADPAKTYQARPEVSRTPEWRRGFRELAKRRLSFD LQLYYPQMEEFLQLAHDFPDVQIILNHTGMQVDGPKHFNAWKKGMHRLAQAPNVACKISGLGMGDWSWTTASIRPYVEEA IAAFGVGRSMFATNFPVDKLFSSFDAVVNAFKEITRYYPHEERLALFHDNAARHYRL
Sequences:
>Translated_297_residues MAELPFIDPHHHLWDLEVNYYPWLTDGVKPSAFGDYEAIRTNYRLDDYLEDARNQNLVKSVHLDVGFDPSDPVGETRWLQ EIANKRGFPHGIVGYADLSKPDVGELLDRHMEYPNFRGIRQSMNYHADPAKTYQARPEVSRTPEWRRGFRELAKRRLSFD LQLYYPQMEEFLQLAHDFPDVQIILNHTGMQVDGPKHFNAWKKGMHRLAQAPNVACKISGLGMGDWSWTTASIRPYVEEA IAAFGVGRSMFATNFPVDKLFSSFDAVVNAFKEITRYYPHEERLALFHDNAARHYRL >Mature_296_residues AELPFIDPHHHLWDLEVNYYPWLTDGVKPSAFGDYEAIRTNYRLDDYLEDARNQNLVKSVHLDVGFDPSDPVGETRWLQE IANKRGFPHGIVGYADLSKPDVGELLDRHMEYPNFRGIRQSMNYHADPAKTYQARPEVSRTPEWRRGFRELAKRRLSFDL QLYYPQMEEFLQLAHDFPDVQIILNHTGMQVDGPKHFNAWKKGMHRLAQAPNVACKISGLGMGDWSWTTASIRPYVEEAI AAFGVGRSMFATNFPVDKLFSSFDAVVNAFKEITRYYPHEERLALFHDNAARHYRL
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006992 [H]
Pfam domain/function: PF04909 Amidohydro_2 [H]
EC number: NA
Molecular weight: Translated: 34490; Mature: 34359
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELPFIDPHHHLWDLEVNYYPWLTDGVKPSAFGDYEAIRTNYRLDDYLEDARNQNLVKS CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCHHHHH VHLDVGFDPSDPVGETRWLQEIANKRGFPHGIVGYADLSKPDVGELLDRHMEYPNFRGIR EEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCHHHHH QSMNYHADPAKTYQARPEVSRTPEWRRGFRELAKRRLSFDLQLYYPQMEEFLQLAHDFPD HHCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHCCCC VQIILNHTGMQVDGPKHFNAWKKGMHRLAQAPNVACKISGLGMGDWSWTTASIRPYVEEA EEEEEECCCCEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHH IAAFGVGRSMFATNFPVDKLFSSFDAVVNAFKEITRYYPHEERLALFHDNAARHYRL HHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCHHHCCC >Mature Secondary Structure AELPFIDPHHHLWDLEVNYYPWLTDGVKPSAFGDYEAIRTNYRLDDYLEDARNQNLVKS CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCHHHHH VHLDVGFDPSDPVGETRWLQEIANKRGFPHGIVGYADLSKPDVGELLDRHMEYPNFRGIR EEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCHHHHH QSMNYHADPAKTYQARPEVSRTPEWRRGFRELAKRRLSFDLQLYYPQMEEFLQLAHDFPD HHCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHCCCC VQIILNHTGMQVDGPKHFNAWKKGMHRLAQAPNVACKISGLGMGDWSWTTASIRPYVEEA EEEEEECCCCEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHH IAAFGVGRSMFATNFPVDKLFSSFDAVVNAFKEITRYYPHEERLALFHDNAARHYRL HHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]