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The map label for this gene is rhaB [C]

Identifier: 13474744

GI number: 13474744

Start: 4588118

End: 4589494

Strand: Reverse

Name: rhaB [C]

Synonym: mll5701

Alternate gene names: 13474744

Gene position: 4589494-4588118 (Counterclockwise)

Preceding gene: 13474745

Following gene: 13474740

Centisome position: 65.23

GC content: 65.65

Gene sequence:

>1377_bases
ATGAGTGCTCTGCGCCACATCGCCGTCATCGACATCGGCAAGACCAACGCCAAGGTGGCGTTGGTCGATCTCGCCACTTC
GAGCGAGGTGGCGTTGCGCCGGATGGCGAACGCGCCGGTGCGGCAAGCGCCCTACCCACATCACGATGTCGAGTCGCTGT
GGACATTCATCCTCGACAGCCTTGCCGGCCTCAACTGCGAACAGCGCATCGACGCCATCTCGATCACTACCCATGGCGCG
ACAGGTGCGCTGGTCGACGCCTCTGGCGAACTGGTGCTGCCCGTGCTCGACTATGAGTTCGACGGCCCCAACGGACTGGC
GGCGGACTATGACGCAATCCGCCCGCCTTTCGCCGAGACGGGCACACCGCGCCTGCCGCTCGGCCTCAATCTCGGCGCGC
AGTTCTTCTGGCAGCAGAAGCGCTTTCCGGCCGCGTTCGCGCATGCGACCGCGATCCTGATGTACCCACAATACTGGGCG
CTGCGCCTGACCGGCGTCGCCGCCAACGAAGTGACCTCGCTTGGTTGCCACACCGATCTGTGGAACCCGTGGACTGCTGG
CTTTTCGTCGCTGGTCGATCGGTTGGATTGGCGCGGCCTGATGGCACCGGTGCGGCCGGCCAGGAATCGCCTCGGCCCGA
TCCTGCCCGCGCTTGCCGCGCGAACAGGCCTTGATGCGCGAACACCTGTGTTCTGCGGCCTGCACGATTCCAACGCCTCG
CTGCTGCCGCATCTCCTGTCGGACGCGCCACCCTTCTCGGTCGTCTCGACCGGCACCTGGGTCGTGTCGATGGCGGTCGG
AGGCAGAGAGATTGCGTTGGATGCGGCGCGCGACACGCTGGTCAATGTCAATGCGCTGGGCGACCCCCTCCCCTCGGCCC
GTTTCATGGGCGGCCGCGAATTTTCCGTGCTGACGGAAGGCCAGCCGGAGACTTGGAGCGAAGACGATATCGGCGCCGTA
CTGGCGCGAAAGACATTGTTGCTGCCATCGACACAGCAAGGGTCCGGGCCGTTCCCGCATCAGGCCGCGACATGGCTCGA
CGCTGAGAGCATCAACGATGGCCAGCGTTTCGCCGCCGTCTCGTTCTATCTGGCACTGATGACGGCGACCTGCCTTGACC
TGATAGGCGCCGATGGCCCGACCACCGTGGAAGGACCCTTTGCCCGCAACCAGCTGTTTGTCGGCATGCTGGCCGCAAGC
ACAGGCCGCGCCGTCGTCGCCTCCGAAGCCACTACCGGCACCAGCATCGGCGCGGCACTGCTAGCGTCCGATCAGGTCAT
GGCGTATGGCAAAGGCGAAAGAATAGAGCCGCCGACCGATCGGGCCTGGGCCGACTATGCCAACGCCTGGCGCGTGGCGG
TCGAAGCACGGGGCTGA

Upstream 100 bases:

>100_bases
CGGTGATGCAGCGCTGGTGGGCAGACATGGCCGACATCATGGAAACCGGGCCGGACAATGAGCCGGTGGCCGTGCCGCTG
GAAACAATGTTCCATATGGC

Downstream 100 bases:

>100_bases
TCAGAGGATCCGCTTGCCGAAGGCCGACATGACGAAGCTGACGGCGTCGGTGGCGATCCTCGGTTCGAGATCAGCGGTCA
GCCCCGAAACGTCCATCGAC

Product: L-fuculokinase

Products: ADP; H+; L-Rhamnulose 1-phosphate [C]

Alternate protein names: L-Fuculokinase; Carbohydrate Kinase Protein; Carbohydrate Kinase Fggy; Carbohydrate Kinase; Sugar Kinase; Rhamnose Kinase; Sugar Kinase-Like Protein; Carbohydrate Kinases; Sugar Kinase Protein; Carbohydrate Kinase Fggy-Like Protein; Carbohydrate Kinase Contains FGGY Family Domain; L-Xylulose Kinase Involved In Competition For Nodulation

Number of amino acids: Translated: 458; Mature: 457

Protein sequence:

>458_residues
MSALRHIAVIDIGKTNAKVALVDLATSSEVALRRMANAPVRQAPYPHHDVESLWTFILDSLAGLNCEQRIDAISITTHGA
TGALVDASGELVLPVLDYEFDGPNGLAADYDAIRPPFAETGTPRLPLGLNLGAQFFWQQKRFPAAFAHATAILMYPQYWA
LRLTGVAANEVTSLGCHTDLWNPWTAGFSSLVDRLDWRGLMAPVRPARNRLGPILPALAARTGLDARTPVFCGLHDSNAS
LLPHLLSDAPPFSVVSTGTWVVSMAVGGREIALDAARDTLVNVNALGDPLPSARFMGGREFSVLTEGQPETWSEDDIGAV
LARKTLLLPSTQQGSGPFPHQAATWLDAESINDGQRFAAVSFYLALMTATCLDLIGADGPTTVEGPFARNQLFVGMLAAS
TGRAVVASEATTGTSIGAALLASDQVMAYGKGERIEPPTDRAWADYANAWRVAVEARG

Sequences:

>Translated_458_residues
MSALRHIAVIDIGKTNAKVALVDLATSSEVALRRMANAPVRQAPYPHHDVESLWTFILDSLAGLNCEQRIDAISITTHGA
TGALVDASGELVLPVLDYEFDGPNGLAADYDAIRPPFAETGTPRLPLGLNLGAQFFWQQKRFPAAFAHATAILMYPQYWA
LRLTGVAANEVTSLGCHTDLWNPWTAGFSSLVDRLDWRGLMAPVRPARNRLGPILPALAARTGLDARTPVFCGLHDSNAS
LLPHLLSDAPPFSVVSTGTWVVSMAVGGREIALDAARDTLVNVNALGDPLPSARFMGGREFSVLTEGQPETWSEDDIGAV
LARKTLLLPSTQQGSGPFPHQAATWLDAESINDGQRFAAVSFYLALMTATCLDLIGADGPTTVEGPFARNQLFVGMLAAS
TGRAVVASEATTGTSIGAALLASDQVMAYGKGERIEPPTDRAWADYANAWRVAVEARG
>Mature_457_residues
SALRHIAVIDIGKTNAKVALVDLATSSEVALRRMANAPVRQAPYPHHDVESLWTFILDSLAGLNCEQRIDAISITTHGAT
GALVDASGELVLPVLDYEFDGPNGLAADYDAIRPPFAETGTPRLPLGLNLGAQFFWQQKRFPAAFAHATAILMYPQYWAL
RLTGVAANEVTSLGCHTDLWNPWTAGFSSLVDRLDWRGLMAPVRPARNRLGPILPALAARTGLDARTPVFCGLHDSNASL
LPHLLSDAPPFSVVSTGTWVVSMAVGGREIALDAARDTLVNVNALGDPLPSARFMGGREFSVLTEGQPETWSEDDIGAVL
ARKTLLLPSTQQGSGPFPHQAATWLDAESINDGQRFAAVSFYLALMTATCLDLIGADGPTTVEGPFARNQLFVGMLAAST
GRAVVASEATTGTSIGAALLASDQVMAYGKGERIEPPTDRAWADYANAWRVAVEARG

Specific function: Metabolism of L-rhamnose; second step. [C]

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.1.5 [C]

Molecular weight: Translated: 48795; Mature: 48664

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALRHIAVIDIGKTNAKVALVDLATSSEVALRRMANAPVRQAPYPHHDVESLWTFILDS
CCCCCEEEEEEECCCCCEEEEEEECCCHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHH
LAGLNCEQRIDAISITTHGATGALVDASGELVLPVLDYEFDGPNGLAADYDAIRPPFAET
HHCCCHHHCCCEEEEEECCCCCEEEECCCCEEEEEEEEEECCCCCCCCCHHHCCCCCCCC
GTPRLPLGLNLGAQFFWQQKRFPAAFAHATAILMYPQYWALRLTGVAANEVTSLGCHTDL
CCCCCCCCCCCCHHHHHHHCCCCHHHHHHEEEEECCCEEEEEEECCCHHHHHHCCCCCCC
WNPWTAGFSSLVDRLDWRGLMAPVRPARNRLGPILPALAARTGLDARTPVFCGLHDSNAS
CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCH
LLPHLLSDAPPFSVVSTGTWVVSMAVGGREIALDAARDTLVNVNALGDPLPSARFMGGRE
HHHHHHCCCCCCEEEECCCEEEEEEECCCEEEEECCCCCEEEECCCCCCCCCHHHCCCCE
FSVLTEGQPETWSEDDIGAVLARKTLLLPSTQQGSGPFPHQAATWLDAESINDGQRFAAV
EEEEECCCCCCCCCCHHHHHHHHHEEECCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHH
SFYLALMTATCLDLIGADGPTTVEGPFARNQLFVGMLAASTGRAVVASEATTGTSIGAAL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCHHHHHH
LASDQVMAYGKGERIEPPTDRAWADYANAWRVAVEARG
HCCCCEEEECCCCCCCCCCCCHHHHHCCEEEEEEEECC
>Mature Secondary Structure 
SALRHIAVIDIGKTNAKVALVDLATSSEVALRRMANAPVRQAPYPHHDVESLWTFILDS
CCCCEEEEEEECCCCCEEEEEEECCCHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHH
LAGLNCEQRIDAISITTHGATGALVDASGELVLPVLDYEFDGPNGLAADYDAIRPPFAET
HHCCCHHHCCCEEEEEECCCCCEEEECCCCEEEEEEEEEECCCCCCCCCHHHCCCCCCCC
GTPRLPLGLNLGAQFFWQQKRFPAAFAHATAILMYPQYWALRLTGVAANEVTSLGCHTDL
CCCCCCCCCCCCHHHHHHHCCCCHHHHHHEEEEECCCEEEEEEECCCHHHHHHCCCCCCC
WNPWTAGFSSLVDRLDWRGLMAPVRPARNRLGPILPALAARTGLDARTPVFCGLHDSNAS
CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCH
LLPHLLSDAPPFSVVSTGTWVVSMAVGGREIALDAARDTLVNVNALGDPLPSARFMGGRE
HHHHHHCCCCCCEEEECCCEEEEEEECCCEEEEECCCCCEEEECCCCCCCCCHHHCCCCE
FSVLTEGQPETWSEDDIGAVLARKTLLLPSTQQGSGPFPHQAATWLDAESINDGQRFAAV
EEEEECCCCCCCCCCHHHHHHHHHEEECCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHH
SFYLALMTATCLDLIGADGPTTVEGPFARNQLFVGMLAASTGRAVVASEATTGTSIGAAL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCHHHHHH
LASDQVMAYGKGERIEPPTDRAWADYANAWRVAVEARG
HCCCCEEEECCCCCCCCCCCCHHHHHCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): 11 {D-ribulose}} 0.2 {L-rhamnulose}} 20 {D-psicose}} 21 {L-tagatose}} 26 {D-sorbose}} 1 {L-xylulose}} 3 {L-fructose}} [C]

Substrates: ATP; L-Rhamnulose [C]

Specific reaction: ATP + L-Rhamnulose --> ADP + H+ + L-Rhamnulose 1-phosphate [C]

General reaction: Phospho group transfer [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA