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The map label for this gene is 13474661

Identifier: 13474661

GI number: 13474661

Start: 4490021

End: 4490776

Strand: Direct

Name: 13474661

Synonym: mlr5598

Alternate gene names: NA

Gene position: 4490021-4490776 (Clockwise)

Preceding gene: 13474660

Following gene: 13474662

Centisome position: 63.81

GC content: 62.3

Gene sequence:

>756_bases
GTGAATGGGGAAGCGGACATGTCTCAGTCAGCGTTGAACACAAGGACCATCGCCACGACGATGCGCGCCGGCCGTTCGCG
GACCGGGCTGCCGGTGTTGCCGGTTCTGGCGGTAGCGATGACCGCTCTGCTGGTCGGGTGTGCGCAGCGCGACAGCATAA
CCGTCGGCGCCATTCCGGACGATTATCGCACCAACCATCCGATCGTCATCGCGGAGAAGAACCAGAAGATCGACCTGCCC
GTCGGCGCCGGCGACCGAGGCATGACCGGTTCGCAGCGCGACACGCTGCTCGGGTTCCTTGACGGCTATGACAAGAGTGC
CGCGCCGACATTGACCATCCAGATTCCCAGCGGATCGGCCAACGAGGTTGCCGCGACGGCGGCCGGCCGTGATTTCGCCA
GGCTCGCGGTTGCCAGCGGGGTCAAGCGCAACCGGATCGTCGTGGTTTCCTATCAGGCTGGCTCGAGCGAGACATCGGCC
CCAGTTCGCGTCTCCTATATCGCGGTGAGAGCCCAGACCGACAAATGCGGACGCTGGCCCGAGGATCTGCTCGAGACGTC
GGAAAACAAGCACTATGCCGACTTCGGCTGCTCCTATCAGAACAATCTCGCTGCCCAGATGGCCAACCCGGCCGATCTGC
TCGGGCCGCGCAAGCAGACCACCATCGACGCTGAAAACCGCGGCAAGGTGATCGATGTCTATCGTGCAAGAGGTATTTCG
GATGAATTCCTCGGCAATTCGGAAGTGAAGTACTGA

Upstream 100 bases:

>100_bases
GCGCCGCCAATTTCCTTGGCAAGGTCAATCGCGTCTACGGCACCATGCAGACCGACAAGCCCAACGGCCGTTACCACGGC
GTTGTCGGCTACATCTACAA

Downstream 100 bases:

>100_bases
GCCGAGCCCTCGAGGAAGAGAAGCCACGGAAAAGAGCATGACCATGAGCAATCTTGCCTATGACGCCACCGTGGACGGCG
GTGATACATCGCCGCAGGAC

Product: pilus assembly protein cpaD

Products: NA

Alternate protein names: Pilus Assembly Protein CpaD; Pilus Assembly Protein; Type IV Pili Component-Like; Components Of Type IV Pilus; Component Of Type IV Pilus

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MNGEADMSQSALNTRTIATTMRAGRSRTGLPVLPVLAVAMTALLVGCAQRDSITVGAIPDDYRTNHPIVIAEKNQKIDLP
VGAGDRGMTGSQRDTLLGFLDGYDKSAAPTLTIQIPSGSANEVAATAAGRDFARLAVASGVKRNRIVVVSYQAGSSETSA
PVRVSYIAVRAQTDKCGRWPEDLLETSENKHYADFGCSYQNNLAAQMANPADLLGPRKQTTIDAENRGKVIDVYRARGIS
DEFLGNSEVKY

Sequences:

>Translated_251_residues
MNGEADMSQSALNTRTIATTMRAGRSRTGLPVLPVLAVAMTALLVGCAQRDSITVGAIPDDYRTNHPIVIAEKNQKIDLP
VGAGDRGMTGSQRDTLLGFLDGYDKSAAPTLTIQIPSGSANEVAATAAGRDFARLAVASGVKRNRIVVVSYQAGSSETSA
PVRVSYIAVRAQTDKCGRWPEDLLETSENKHYADFGCSYQNNLAAQMANPADLLGPRKQTTIDAENRGKVIDVYRARGIS
DEFLGNSEVKY
>Mature_251_residues
MNGEADMSQSALNTRTIATTMRAGRSRTGLPVLPVLAVAMTALLVGCAQRDSITVGAIPDDYRTNHPIVIAEKNQKIDLP
VGAGDRGMTGSQRDTLLGFLDGYDKSAAPTLTIQIPSGSANEVAATAAGRDFARLAVASGVKRNRIVVVSYQAGSSETSA
PVRVSYIAVRAQTDKCGRWPEDLLETSENKHYADFGCSYQNNLAAQMANPADLLGPRKQTTIDAENRGKVIDVYRARGIS
DEFLGNSEVKY

Specific function: Unknown

COG id: COG5461

COG function: function code N; Type IV pili component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26808; Mature: 26808

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGEADMSQSALNTRTIATTMRAGRSRTGLPVLPVLAVAMTALLVGCAQRDSITVGAIPD
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCC
DYRTNHPIVIAEKNQKIDLPVGAGDRGMTGSQRDTLLGFLDGYDKSAAPTLTIQIPSGSA
CCCCCCCEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCC
NEVAATAAGRDFARLAVASGVKRNRIVVVSYQAGSSETSAPVRVSYIAVRAQTDKCGRWP
CCEEEHHCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCH
EDLLETSENKHYADFGCSYQNNLAAQMANPADLLGPRKQTTIDAENRGKVIDVYRARGIS
HHHHHCCCCCEEECCCCCCCCCHHHHCCCCHHHCCCCCCCEECCCCCCCEEEEEECCCCC
DEFLGNSEVKY
HHHCCCCCCCC
>Mature Secondary Structure
MNGEADMSQSALNTRTIATTMRAGRSRTGLPVLPVLAVAMTALLVGCAQRDSITVGAIPD
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCC
DYRTNHPIVIAEKNQKIDLPVGAGDRGMTGSQRDTLLGFLDGYDKSAAPTLTIQIPSGSA
CCCCCCCEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCC
NEVAATAAGRDFARLAVASGVKRNRIVVVSYQAGSSETSAPVRVSYIAVRAQTDKCGRWP
CCEEEHHCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCH
EDLLETSENKHYADFGCSYQNNLAAQMANPADLLGPRKQTTIDAENRGKVIDVYRARGIS
HHHHHCCCCCEEECCCCCCCCCHHHHCCCCHHHCCCCCCCEECCCCCCCEEEEEECCCCC
DEFLGNSEVKY
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA