| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474662
Identifier: 13474662
GI number: 13474662
Start: 4491243
End: 4492103
Strand: Direct
Name: 13474662
Synonym: mlr5600
Alternate gene names: NA
Gene position: 4491243-4492103 (Clockwise)
Preceding gene: 13474661
Following gene: 13474663
Centisome position: 63.83
GC content: 61.79
Gene sequence:
>861_bases ATGGCCGACATCGTCAGTGTCGTGTCTTCGATTTTCGTCGATCCGGAGGCTGAACCGATCGGCCGCTCGATCGCCTTTGT CGGCGCCAAGGGGGGCGTCGGCTCTTCCACCATCGCCCACAATGTCGCCTGGGCAATGTCCTCGCTGTTCAAATCCGAAG TCGTCGTCGCCGATCTCGATCTCGCCTTCGGCACGGCCAACATCAATTTCGACCAGGATCCGGCACAGGGCATCGCCGAA GCGGTATTCTCGCCCGAACGCGTCGATGAAGTCTATCTCGACCGGCTGCTGACGCAGTGCGCCGAGCACCTGTCGTTGCT CGCCGCGCCTTCGACGCTGGAACGCGTCTACGACTTCGATCCCGATGCCTTTGCGCAGCTTGTCGACACCGCGCAGCGCA GCGTGCCGCTTCTGGTCCTGGACGTCCCCCATATCTGGACGGGCTGGGCCAAGAACACGCTGGTCAAGGCCGACGAGATC GTCATCACGGCGACGCCGGAACTGGCCAATCTGCGCAACACCAAGAACATGGTGGACATGCTCAAGCGGCTTCGCCCCAA CGACCCGCCGCCGAAGCTGATCATCAACCAGGCAGGCGTTCCCAAGCGGCCGGAAATTTCGCCGTCCGATTTCGCCGAGC CGCTCGGCCTGACGCCGATGTCGGTCATTGGCTTCGATCCATTGCTGTTCGGCAATGCCGCCAACAACGGGCGTATGCTC GGCGAGATGGATGCCAAGAACCCGGTTGTCGCGATCATCAACGAGATTGCCCATGTGCTGACCGGGCGAAGCGAAATCCG CATGAAAAAGAAGGCTGGCCTGGGCAGCCTGCTCGGCAAGCTCTCGCGCAACAAGAAGTAG
Upstream 100 bases:
>100_bases ATCCTCGAAAGTGGTGGTGATCGGCCACTACAATGATGTCGGTCTCTATCGCGAGCTCATCCGCTCCGGCATCTCCGAAT ATGTCATTGCGCCCGTGTCG
Downstream 100 bases:
>100_bases TCGATCATGTTCGGTAAAAGAGGCAACGACGACGGCAACCGGTTCACGCCGGAATTCCGCCAGCCGGCACCGGCGCCGGC TGTGCCGCCGCCCGCGGGTT
Product: pilus assembly protein cpaE
Products: NA
Alternate protein names: Pilus Assembly Protein CpaE; Pilus Assembly Protein; Response Regulator Receiver Domain-Containing Protein; Flp Pilus Assembly Protein ATPase CpaE-Like; Flp Pilus Assembly Protein ATPase CpaE; Flp Pilus Assembly Protein ATPase CpaE-Like Protein; Pilus Assembly ATPase CpaE; Response Regulator Receiver; Flp Pilus Assembly Protein ATPase; Flp Pilus Assembly ATPase CpaE; Two-Component Response Regulator; CtpF Protein; Flp Pilus Assembly ATPase; Septum Site-Determining Protein; Fimbriae Assembly-Related Protein; CpaE2 Pilus Assembly Protein; ParaA Family ATPase; TadE-Like; Component Of Type IV Pilus; Components Of Type IV Pilus
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MADIVSVVSSIFVDPEAEPIGRSIAFVGAKGGVGSSTIAHNVAWAMSSLFKSEVVVADLDLAFGTANINFDQDPAQGIAE AVFSPERVDEVYLDRLLTQCAEHLSLLAAPSTLERVYDFDPDAFAQLVDTAQRSVPLLVLDVPHIWTGWAKNTLVKADEI VITATPELANLRNTKNMVDMLKRLRPNDPPPKLIINQAGVPKRPEISPSDFAEPLGLTPMSVIGFDPLLFGNAANNGRML GEMDAKNPVVAIINEIAHVLTGRSEIRMKKKAGLGSLLGKLSRNKK
Sequences:
>Translated_286_residues MADIVSVVSSIFVDPEAEPIGRSIAFVGAKGGVGSSTIAHNVAWAMSSLFKSEVVVADLDLAFGTANINFDQDPAQGIAE AVFSPERVDEVYLDRLLTQCAEHLSLLAAPSTLERVYDFDPDAFAQLVDTAQRSVPLLVLDVPHIWTGWAKNTLVKADEI VITATPELANLRNTKNMVDMLKRLRPNDPPPKLIINQAGVPKRPEISPSDFAEPLGLTPMSVIGFDPLLFGNAANNGRML GEMDAKNPVVAIINEIAHVLTGRSEIRMKKKAGLGSLLGKLSRNKK >Mature_285_residues ADIVSVVSSIFVDPEAEPIGRSIAFVGAKGGVGSSTIAHNVAWAMSSLFKSEVVVADLDLAFGTANINFDQDPAQGIAEA VFSPERVDEVYLDRLLTQCAEHLSLLAAPSTLERVYDFDPDAFAQLVDTAQRSVPLLVLDVPHIWTGWAKNTLVKADEIV ITATPELANLRNTKNMVDMLKRLRPNDPPPKLIINQAGVPKRPEISPSDFAEPLGLTPMSVIGFDPLLFGNAANNGRMLG EMDAKNPVVAIINEIAHVLTGRSEIRMKKKAGLGSLLGKLSRNKK
Specific function: Unknown
COG id: COG4963
COG function: function code U; Flp pilus assembly protein, ATPase CpaE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30830; Mature: 30699
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADIVSVVSSIFVDPEAEPIGRSIAFVGAKGGVGSSTIAHNVAWAMSSLFKSEVVVADLD CHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCEEEEEEE LAFGTANINFDQDPAQGIAEAVFSPERVDEVYLDRLLTQCAEHLSLLAAPSTLERVYDFD EEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC PDAFAQLVDTAQRSVPLLVLDVPHIWTGWAKNTLVKADEIVITATPELANLRNTKNMVDM HHHHHHHHHHHHHCCCEEEEECCCHHCCHHHCCEEECCCEEEEECCHHHHHHHHHHHHHH LKRLRPNDPPPKLIINQAGVPKRPEISPSDFAEPLGLTPMSVIGFDPLLFGNAANNGRML HHHHCCCCCCCCEEEECCCCCCCCCCCHHHHCCCCCCCCHHHHCCCHHEECCCCCCCCEE GEMDAKNPVVAIINEIAHVLTGRSEIRMKKKAGLGSLLGKLSRNKK ECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCCC >Mature Secondary Structure ADIVSVVSSIFVDPEAEPIGRSIAFVGAKGGVGSSTIAHNVAWAMSSLFKSEVVVADLD HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCEEEEEEE LAFGTANINFDQDPAQGIAEAVFSPERVDEVYLDRLLTQCAEHLSLLAAPSTLERVYDFD EEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC PDAFAQLVDTAQRSVPLLVLDVPHIWTGWAKNTLVKADEIVITATPELANLRNTKNMVDM HHHHHHHHHHHHHCCCEEEEECCCHHCCHHHCCEEECCCEEEEECCHHHHHHHHHHHHHH LKRLRPNDPPPKLIINQAGVPKRPEISPSDFAEPLGLTPMSVIGFDPLLFGNAANNGRML HHHHCCCCCCCCEEEECCCCCCCCCCCHHHHCCCCCCCCHHHHCCCHHEECCCCCCCCEE GEMDAKNPVVAIINEIAHVLTGRSEIRMKKKAGLGSLLGKLSRNKK ECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA