| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474557
Identifier: 13474557
GI number: 13474557
Start: 4376759
End: 4377997
Strand: Direct
Name: 13474557
Synonym: mlr5464
Alternate gene names: NA
Gene position: 4376759-4377997 (Clockwise)
Preceding gene: 13474556
Following gene: 13474565
Centisome position: 62.2
GC content: 59.32
Gene sequence:
>1239_bases ATGCGTGAGCTGCCTCCACTTGATCTGTACGAAACTGAGGCCGCTGAGAGGGCGGGGATGGCCGCTGGCGAACCATCTGC CGGGGATGTAGAGCTTCCCGCCGAGCCGCTGCTCGCGGGTGAGGCGCGGGGCCAGCCGTTCACTCGGCAATCAGTCGCGC CGCTCGCCACGATCGATCTGTCAACCGTGCCCGCTGATGACGTAACGCCGCGTAGGTGGATCGTTCCCGACCTCATCCCT GATCGCAATGTCACAGATATTTCCGGCGACGGTGGCTTAGGCAAATCCCTCCTCGCGTTGCAACTCGGCATTGCCATGGC TGCCGGTCGCGATTGGCTCGGCACAATGCCTGAGCCTGGCGGGTTTCTGTACGTTTCGTGCGAGGACGAGCCGAACGAAG TCCTGCGGCGGCGCAACGCCGTTCTGGCCGGCATGGGGCTGACGCCCGGCGATATCCGCAATTTATATCTGGCTGATCTA ACCGATGCGGAAGGCACGGAACTGGCAGCACCGGGCAAAGCCGCGCTGGAATTGACGGCCCTACATCATCGGTTCGAAGT GACGATCCGGCAATTGCGCCCGAAATGTGCTGTCCTGGATACACGCGCAGACGTCTTCGGAGGCAACGAATTGTCTCGGG TCCAAGTCCGCATGTTCGTCCGGTCGCTGCGGCGGCTGTGTATCGCCCATGACATGGCGATTATCCTCCTGTCGCATCCG TCCGTTTCAGGCATGGCGTCCGGCTCCGGGCAATCCGGCTCGACAGGGTGGGGCAACTCGGTGCGGTCGCGATTATACCT TACAGCGCCAAAATCCGAGGGCGATACTGACCTCGATCCAGACATTCGCATCCTTTCTAGCAAGAAAGCGAATTACGGAC CTCACGGCGCTGAGATCGTGCTTCGATGGGATCGCGGCATGTTCCGGCCGGATCGGGATGCACTTGCAAGCCTCGACCGT GATCAGCAAGACCGGGAGATAGAAGTGACCTTTCTGCAATTGCTTTCGAAACGGGAGAAGGAAGGCCGTCGCGCGAATGC GTCATCCGGGCCAAACTACGCGCCGAAAGTGCTAGCTGAAATGAATGGAACAATTAGCCGTGCGAAATTCAGGGGCGCGA TGGAGCGGCTATTTGCAAAGGAAGAAATCGCTTCTGTATCTTATGAGGCGAACGGCAAGGGCAGCACTCAACTTGTGCTT ACGGACAAGGGAATGTCTCGGCTTCGAATTCCCTTTTGA
Upstream 100 bases:
>100_bases CCGGAATTGCGCCGTCGCCGAGATTTGGAAAGGCGTGGCCTGCTGCCGCGCTGGGCAGAGCGGCCCGCATCGAAACGGAG CGATAGGCAGGAGGCGCGCC
Downstream 100 bases:
>100_bases CAGTCTCTCACGTTTCCGATCTCCCCCCGATCTCTCGGCCCGATCTCCCCCGATCTCCTTTCCGATCTCCCGCATGAATT CCCCGATCTCCACGCGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: RecA-Family ATPase; ATPase
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MRELPPLDLYETEAAERAGMAAGEPSAGDVELPAEPLLAGEARGQPFTRQSVAPLATIDLSTVPADDVTPRRWIVPDLIP DRNVTDISGDGGLGKSLLALQLGIAMAAGRDWLGTMPEPGGFLYVSCEDEPNEVLRRRNAVLAGMGLTPGDIRNLYLADL TDAEGTELAAPGKAALELTALHHRFEVTIRQLRPKCAVLDTRADVFGGNELSRVQVRMFVRSLRRLCIAHDMAIILLSHP SVSGMASGSGQSGSTGWGNSVRSRLYLTAPKSEGDTDLDPDIRILSSKKANYGPHGAEIVLRWDRGMFRPDRDALASLDR DQQDREIEVTFLQLLSKREKEGRRANASSGPNYAPKVLAEMNGTISRAKFRGAMERLFAKEEIASVSYEANGKGSTQLVL TDKGMSRLRIPF
Sequences:
>Translated_412_residues MRELPPLDLYETEAAERAGMAAGEPSAGDVELPAEPLLAGEARGQPFTRQSVAPLATIDLSTVPADDVTPRRWIVPDLIP DRNVTDISGDGGLGKSLLALQLGIAMAAGRDWLGTMPEPGGFLYVSCEDEPNEVLRRRNAVLAGMGLTPGDIRNLYLADL TDAEGTELAAPGKAALELTALHHRFEVTIRQLRPKCAVLDTRADVFGGNELSRVQVRMFVRSLRRLCIAHDMAIILLSHP SVSGMASGSGQSGSTGWGNSVRSRLYLTAPKSEGDTDLDPDIRILSSKKANYGPHGAEIVLRWDRGMFRPDRDALASLDR DQQDREIEVTFLQLLSKREKEGRRANASSGPNYAPKVLAEMNGTISRAKFRGAMERLFAKEEIASVSYEANGKGSTQLVL TDKGMSRLRIPF >Mature_412_residues MRELPPLDLYETEAAERAGMAAGEPSAGDVELPAEPLLAGEARGQPFTRQSVAPLATIDLSTVPADDVTPRRWIVPDLIP DRNVTDISGDGGLGKSLLALQLGIAMAAGRDWLGTMPEPGGFLYVSCEDEPNEVLRRRNAVLAGMGLTPGDIRNLYLADL TDAEGTELAAPGKAALELTALHHRFEVTIRQLRPKCAVLDTRADVFGGNELSRVQVRMFVRSLRRLCIAHDMAIILLSHP SVSGMASGSGQSGSTGWGNSVRSRLYLTAPKSEGDTDLDPDIRILSSKKANYGPHGAEIVLRWDRGMFRPDRDALASLDR DQQDREIEVTFLQLLSKREKEGRRANASSGPNYAPKVLAEMNGTISRAKFRGAMERLFAKEEIASVSYEANGKGSTQLVL TDKGMSRLRIPF
Specific function: Unknown
COG id: COG3598
COG function: function code L; RecA-family ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44729; Mature: 44729
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRELPPLDLYETEAAERAGMAAGEPSAGDVELPAEPLLAGEARGQPFTRQSVAPLATIDL CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEEE STVPADDVTPRRWIVPDLIPDRNVTDISGDGGLGKSLLALQLGIAMAAGRDWLGTMPEPG CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC GFLYVSCEDEPNEVLRRRNAVLAGMGLTPGDIRNLYLADLTDAEGTELAAPGKAALELTA CEEEEEECCCHHHHHHHHCCEEEECCCCCHHHCEEEEEECCCCCCCEECCCCHHHEEHHH LHHRFEVTIRQLRPKCAVLDTRADVFGGNELSRVQVRMFVRSLRRLCIAHDMAIILLSHP HHHHHHHHHHHHCCCCEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECC SVSGMASGSGQSGSTGWGNSVRSRLYLTAPKSEGDTDLDPDIRILSSKKANYGPHGAEIV CCCCCCCCCCCCCCCCCCHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCEEE LRWDRGMFRPDRDALASLDRDQQDREIEVTFLQLLSKREKEGRRANASSGPNYAPKVLAE EEECCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH MNGTISRAKFRGAMERLFAKEEIASVSYEANGKGSTQLVLTDKGMSRLRIPF HCCCHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCEEEEEECCCCCEECCCC >Mature Secondary Structure MRELPPLDLYETEAAERAGMAAGEPSAGDVELPAEPLLAGEARGQPFTRQSVAPLATIDL CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEEE STVPADDVTPRRWIVPDLIPDRNVTDISGDGGLGKSLLALQLGIAMAAGRDWLGTMPEPG CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC GFLYVSCEDEPNEVLRRRNAVLAGMGLTPGDIRNLYLADLTDAEGTELAAPGKAALELTA CEEEEEECCCHHHHHHHHCCEEEECCCCCHHHCEEEEEECCCCCCCEECCCCHHHEEHHH LHHRFEVTIRQLRPKCAVLDTRADVFGGNELSRVQVRMFVRSLRRLCIAHDMAIILLSHP HHHHHHHHHHHHCCCCEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECC SVSGMASGSGQSGSTGWGNSVRSRLYLTAPKSEGDTDLDPDIRILSSKKANYGPHGAEIV CCCCCCCCCCCCCCCCCCHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCEEE LRWDRGMFRPDRDALASLDRDQQDREIEVTFLQLLSKREKEGRRANASSGPNYAPKVLAE EEECCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH MNGTISRAKFRGAMERLFAKEEIASVSYEANGKGSTQLVLTDKGMSRLRIPF HCCCHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCEEEEEECCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA