Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13474565

Identifier: 13474565

GI number: 13474565

Start: 4386818

End: 4387753

Strand: Direct

Name: 13474565

Synonym: mlr5472

Alternate gene names: NA

Gene position: 4386818-4387753 (Clockwise)

Preceding gene: 13474557

Following gene: 13474566

Centisome position: 62.35

GC content: 60.79

Gene sequence:

>936_bases
ATGGCCGGTCCCGACGACGTCCCCGCGTTTACGGTAACGTACTTCACGAGGTGTCCACTTTGGTCCGAGCATGTGGATCG
CTCATCTGCGGACAGACGCGGCCTGGCAACTCGGGAGGTAGGTATGGTTCATTCGGTTCGAGGCTTCAGCGGGACGGTTC
GAGGCTTCAGCGGGACGGTGAGAGCACGCGTGTTGATCTTAGCCTGTGTGGCCGCCCTAGTCCCGCTGACGAACGTGCGT
GCTGCCGATGACGCAAAGGACCTGCTGAAGACCATGTCGGATTTCATGGCCAAGCAGCAGAAATTCTCCTTCTCCTACCA
ATCGACGATCGAGGTTGTCACACCCGACTTCCAGAAGTTGCAATTCGTCAGCTCCGGCACGGCGACCGTGGATCGCCCCG
ACAAGCTGCGCGTCACCCGCAAAGGCGGCTTCGCCGATATCGACGTGGTGTTCGACGGTGCAACCTTCTCGGTGCTCGGC
AAGAACCTCAACGACTATGCGCAGATCGAAGCGAAGGGCACCATCGACGAACTGACCGAGCGCCTCGCCGACGCCGGCGT
CGAGGCACCGGGCGCGGACCTTCTGTCCGCGAACATCTTCGACGGCCTGATCGATGGCGTCACCGACGCCAAGCATATCG
CCGGTGCGGTGGTGAATGGCGTTGACTGCGAATACCTCGCCTTCCGCAAGCCGGATGTCGACTGGGAGATCTGGATCGCC
GACGGAGACCGGCCGGTCCCGCTACGCTACGTGATCACCAGCAAGCACGTCAGTCAGGCCCCACAGTACATGTTCGAACT
TAGCGACTTCAAGAGCGGCGATGAGGTCGAATCGGCGGATTTCAGGTTCTCGCCTGGAAGCGCGAAGAAGGTCGATCTCA
GCGCGCTTGTTTCAATCGACGAGCTGCCCAGTCAGACCGCGGAGGATGCACAATGA

Upstream 100 bases:

>100_bases
CTGATCGCTCTGCAATTGCGACAGTCGCCTTCCCCTACCTGAAATCCAGCACGTTACTGTAACACCCCGCTGCACCTCCC
GCTGCCTAAGTTCCCGCAGG

Downstream 100 bases:

>100_bases
CCAACCGCGCCAAGTCTCTCATGTTGTGCCTTACCGCAGCATTCGCCCTTGGCGGCATCGAATTCGAGCGCGACGGTGCT
TTCGGCCTCAAGCTTGGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MAGPDDVPAFTVTYFTRCPLWSEHVDRSSADRRGLATREVGMVHSVRGFSGTVRGFSGTVRARVLILACVAALVPLTNVR
AADDAKDLLKTMSDFMAKQQKFSFSYQSTIEVVTPDFQKLQFVSSGTATVDRPDKLRVTRKGGFADIDVVFDGATFSVLG
KNLNDYAQIEAKGTIDELTERLADAGVEAPGADLLSANIFDGLIDGVTDAKHIAGAVVNGVDCEYLAFRKPDVDWEIWIA
DGDRPVPLRYVITSKHVSQAPQYMFELSDFKSGDEVESADFRFSPGSAKKVDLSALVSIDELPSQTAEDAQ

Sequences:

>Translated_311_residues
MAGPDDVPAFTVTYFTRCPLWSEHVDRSSADRRGLATREVGMVHSVRGFSGTVRGFSGTVRARVLILACVAALVPLTNVR
AADDAKDLLKTMSDFMAKQQKFSFSYQSTIEVVTPDFQKLQFVSSGTATVDRPDKLRVTRKGGFADIDVVFDGATFSVLG
KNLNDYAQIEAKGTIDELTERLADAGVEAPGADLLSANIFDGLIDGVTDAKHIAGAVVNGVDCEYLAFRKPDVDWEIWIA
DGDRPVPLRYVITSKHVSQAPQYMFELSDFKSGDEVESADFRFSPGSAKKVDLSALVSIDELPSQTAEDAQ
>Mature_310_residues
AGPDDVPAFTVTYFTRCPLWSEHVDRSSADRRGLATREVGMVHSVRGFSGTVRGFSGTVRARVLILACVAALVPLTNVRA
ADDAKDLLKTMSDFMAKQQKFSFSYQSTIEVVTPDFQKLQFVSSGTATVDRPDKLRVTRKGGFADIDVVFDGATFSVLGK
NLNDYAQIEAKGTIDELTERLADAGVEAPGADLLSANIFDGLIDGVTDAKHIAGAVVNGVDCEYLAFRKPDVDWEIWIAD
GDRPVPLRYVITSKHVSQAPQYMFELSDFKSGDEVESADFRFSPGSAKKVDLSALVSIDELPSQTAEDAQ

Specific function: Unknown

COG id: COG3900

COG function: function code S; Predicted periplasmic protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33802; Mature: 33671

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGPDDVPAFTVTYFTRCPLWSEHVDRSSADRRGLATREVGMVHSVRGFSGTVRGFSGTV
CCCCCCCCEEEEEEEEECCCCHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCCCCCHHH
RARVLILACVAALVPLTNVRAADDAKDLLKTMSDFMAKQQKFSFSYQSTIEVVTPDFQKL
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCHHHH
QFVSSGTATVDRPDKLRVTRKGGFADIDVVFDGATFSVLGKNLNDYAQIEAKGTIDELTE
EECCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCEECCCCCCCCEEEECCCCHHHHHH
RLADAGVEAPGADLLSANIFDGLIDGVTDAKHIAGAVVNGVDCEYLAFRKPDVDWEIWIA
HHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEE
DGDRPVPLRYVITSKHVSQAPQYMFELSDFKSGDEVESADFRFSPGSAKKVDLSALVSID
CCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEECHHHHHHHH
ELPSQTAEDAQ
HCCCCCCCCCC
>Mature Secondary Structure 
AGPDDVPAFTVTYFTRCPLWSEHVDRSSADRRGLATREVGMVHSVRGFSGTVRGFSGTV
CCCCCCCEEEEEEEEECCCCHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCCCCCHHH
RARVLILACVAALVPLTNVRAADDAKDLLKTMSDFMAKQQKFSFSYQSTIEVVTPDFQKL
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCHHHH
QFVSSGTATVDRPDKLRVTRKGGFADIDVVFDGATFSVLGKNLNDYAQIEAKGTIDELTE
EECCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCEECCCCCCCCEEEECCCCHHHHHH
RLADAGVEAPGADLLSANIFDGLIDGVTDAKHIAGAVVNGVDCEYLAFRKPDVDWEIWIA
HHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEE
DGDRPVPLRYVITSKHVSQAPQYMFELSDFKSGDEVESADFRFSPGSAKKVDLSALVSID
CCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEECHHHHHHHH
ELPSQTAEDAQ
HCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA