| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474565
Identifier: 13474565
GI number: 13474565
Start: 4386818
End: 4387753
Strand: Direct
Name: 13474565
Synonym: mlr5472
Alternate gene names: NA
Gene position: 4386818-4387753 (Clockwise)
Preceding gene: 13474557
Following gene: 13474566
Centisome position: 62.35
GC content: 60.79
Gene sequence:
>936_bases ATGGCCGGTCCCGACGACGTCCCCGCGTTTACGGTAACGTACTTCACGAGGTGTCCACTTTGGTCCGAGCATGTGGATCG CTCATCTGCGGACAGACGCGGCCTGGCAACTCGGGAGGTAGGTATGGTTCATTCGGTTCGAGGCTTCAGCGGGACGGTTC GAGGCTTCAGCGGGACGGTGAGAGCACGCGTGTTGATCTTAGCCTGTGTGGCCGCCCTAGTCCCGCTGACGAACGTGCGT GCTGCCGATGACGCAAAGGACCTGCTGAAGACCATGTCGGATTTCATGGCCAAGCAGCAGAAATTCTCCTTCTCCTACCA ATCGACGATCGAGGTTGTCACACCCGACTTCCAGAAGTTGCAATTCGTCAGCTCCGGCACGGCGACCGTGGATCGCCCCG ACAAGCTGCGCGTCACCCGCAAAGGCGGCTTCGCCGATATCGACGTGGTGTTCGACGGTGCAACCTTCTCGGTGCTCGGC AAGAACCTCAACGACTATGCGCAGATCGAAGCGAAGGGCACCATCGACGAACTGACCGAGCGCCTCGCCGACGCCGGCGT CGAGGCACCGGGCGCGGACCTTCTGTCCGCGAACATCTTCGACGGCCTGATCGATGGCGTCACCGACGCCAAGCATATCG CCGGTGCGGTGGTGAATGGCGTTGACTGCGAATACCTCGCCTTCCGCAAGCCGGATGTCGACTGGGAGATCTGGATCGCC GACGGAGACCGGCCGGTCCCGCTACGCTACGTGATCACCAGCAAGCACGTCAGTCAGGCCCCACAGTACATGTTCGAACT TAGCGACTTCAAGAGCGGCGATGAGGTCGAATCGGCGGATTTCAGGTTCTCGCCTGGAAGCGCGAAGAAGGTCGATCTCA GCGCGCTTGTTTCAATCGACGAGCTGCCCAGTCAGACCGCGGAGGATGCACAATGA
Upstream 100 bases:
>100_bases CTGATCGCTCTGCAATTGCGACAGTCGCCTTCCCCTACCTGAAATCCAGCACGTTACTGTAACACCCCGCTGCACCTCCC GCTGCCTAAGTTCCCGCAGG
Downstream 100 bases:
>100_bases CCAACCGCGCCAAGTCTCTCATGTTGTGCCTTACCGCAGCATTCGCCCTTGGCGGCATCGAATTCGAGCGCGACGGTGCT TTCGGCCTCAAGCTTGGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MAGPDDVPAFTVTYFTRCPLWSEHVDRSSADRRGLATREVGMVHSVRGFSGTVRGFSGTVRARVLILACVAALVPLTNVR AADDAKDLLKTMSDFMAKQQKFSFSYQSTIEVVTPDFQKLQFVSSGTATVDRPDKLRVTRKGGFADIDVVFDGATFSVLG KNLNDYAQIEAKGTIDELTERLADAGVEAPGADLLSANIFDGLIDGVTDAKHIAGAVVNGVDCEYLAFRKPDVDWEIWIA DGDRPVPLRYVITSKHVSQAPQYMFELSDFKSGDEVESADFRFSPGSAKKVDLSALVSIDELPSQTAEDAQ
Sequences:
>Translated_311_residues MAGPDDVPAFTVTYFTRCPLWSEHVDRSSADRRGLATREVGMVHSVRGFSGTVRGFSGTVRARVLILACVAALVPLTNVR AADDAKDLLKTMSDFMAKQQKFSFSYQSTIEVVTPDFQKLQFVSSGTATVDRPDKLRVTRKGGFADIDVVFDGATFSVLG KNLNDYAQIEAKGTIDELTERLADAGVEAPGADLLSANIFDGLIDGVTDAKHIAGAVVNGVDCEYLAFRKPDVDWEIWIA DGDRPVPLRYVITSKHVSQAPQYMFELSDFKSGDEVESADFRFSPGSAKKVDLSALVSIDELPSQTAEDAQ >Mature_310_residues AGPDDVPAFTVTYFTRCPLWSEHVDRSSADRRGLATREVGMVHSVRGFSGTVRGFSGTVRARVLILACVAALVPLTNVRA ADDAKDLLKTMSDFMAKQQKFSFSYQSTIEVVTPDFQKLQFVSSGTATVDRPDKLRVTRKGGFADIDVVFDGATFSVLGK NLNDYAQIEAKGTIDELTERLADAGVEAPGADLLSANIFDGLIDGVTDAKHIAGAVVNGVDCEYLAFRKPDVDWEIWIAD GDRPVPLRYVITSKHVSQAPQYMFELSDFKSGDEVESADFRFSPGSAKKVDLSALVSIDELPSQTAEDAQ
Specific function: Unknown
COG id: COG3900
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33802; Mature: 33671
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGPDDVPAFTVTYFTRCPLWSEHVDRSSADRRGLATREVGMVHSVRGFSGTVRGFSGTV CCCCCCCCEEEEEEEEECCCCHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCCCCCHHH RARVLILACVAALVPLTNVRAADDAKDLLKTMSDFMAKQQKFSFSYQSTIEVVTPDFQKL HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCHHHH QFVSSGTATVDRPDKLRVTRKGGFADIDVVFDGATFSVLGKNLNDYAQIEAKGTIDELTE EECCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCEECCCCCCCCEEEECCCCHHHHHH RLADAGVEAPGADLLSANIFDGLIDGVTDAKHIAGAVVNGVDCEYLAFRKPDVDWEIWIA HHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEE DGDRPVPLRYVITSKHVSQAPQYMFELSDFKSGDEVESADFRFSPGSAKKVDLSALVSID CCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEECHHHHHHHH ELPSQTAEDAQ HCCCCCCCCCC >Mature Secondary Structure AGPDDVPAFTVTYFTRCPLWSEHVDRSSADRRGLATREVGMVHSVRGFSGTVRGFSGTV CCCCCCCEEEEEEEEECCCCHHHHCCCCCHHCCCCHHHHHHHHHCCCCCCCCCCCCHHH RARVLILACVAALVPLTNVRAADDAKDLLKTMSDFMAKQQKFSFSYQSTIEVVTPDFQKL HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCHHHH QFVSSGTATVDRPDKLRVTRKGGFADIDVVFDGATFSVLGKNLNDYAQIEAKGTIDELTE EECCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCEECCCCCCCCEEEECCCCHHHHHH RLADAGVEAPGADLLSANIFDGLIDGVTDAKHIAGAVVNGVDCEYLAFRKPDVDWEIWIA HHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEE DGDRPVPLRYVITSKHVSQAPQYMFELSDFKSGDEVESADFRFSPGSAKKVDLSALVSID CCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEECHHHHHHHH ELPSQTAEDAQ HCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA