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The map label for this gene is 13474542

Identifier: 13474542

GI number: 13474542

Start: 4359879

End: 4360361

Strand: Direct

Name: 13474542

Synonym: mlr5447

Alternate gene names: NA

Gene position: 4359879-4360361 (Clockwise)

Preceding gene: 13474541

Following gene: 13474543

Centisome position: 61.96

GC content: 60.87

Gene sequence:

>483_bases
ATGGAACAGAAGGTCGCGGAAAAGCGCCAGCGCATTTCGACCCTCGGCCAGATCGGCCTGCAGCAATTCGCGCCCTATCT
GATGAACCGCATCATGGGCCGCTACAACGCCACTTTGCGCGACGATTTCCGCAAGCAGGGCCTGACCATTCCGCAGGTGC
GCACGCTGGCTGTCCTATCGGTCACCGATGGCGTCACCGTCAACGACCTATCGGTCTACACGGTCATCGAACAGTCGACC
TTGAGCCGCACGCTCGACACCCTGGAGGGGCAAGGCTTCGTGCGGCGCGAGCAGGGCGTCACCGACAGCCGCATCCGCCA
TGTCTTCCTCACCGATGAGGGCCGCGCCGAGTTCACCCGTGCCTGGCCGGCCATGCATGACGCCTTCGAGGCGATGTTCG
AGGGTATCGACGATGCCGAATATGCAGCACTGATCGCCACGCTTTTGAAGATGCTGAAAAACATTCGCAAGCACGACATC
TAA

Upstream 100 bases:

>100_bases
ACAAGACCGGCATCAAGAACCTATACCATATCGGCGCCTCGACCCATCCGGGCGCGGGTCTCGGCGGCGGTTCCGGCTTT
CTTCTGGCGGGGAGGCTGTG

Downstream 100 bases:

>100_bases
TGCATGTCGCCCAAAAGTGGATCCGGTTTTGGGAAAACGACATGCATAAAAAAGGACTCTAGACCTACGCGCCGCCATTG
CCGGGCGGTAACGGAAGGAG

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator MarR Family; Transcriptional Regulatory Protein; MarR Family Regulatory Helix-Turn-Helix Protein

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MEQKVAEKRQRISTLGQIGLQQFAPYLMNRIMGRYNATLRDDFRKQGLTIPQVRTLAVLSVTDGVTVNDLSVYTVIEQST
LSRTLDTLEGQGFVRREQGVTDSRIRHVFLTDEGRAEFTRAWPAMHDAFEAMFEGIDDAEYAALIATLLKMLKNIRKHDI

Sequences:

>Translated_160_residues
MEQKVAEKRQRISTLGQIGLQQFAPYLMNRIMGRYNATLRDDFRKQGLTIPQVRTLAVLSVTDGVTVNDLSVYTVIEQST
LSRTLDTLEGQGFVRREQGVTDSRIRHVFLTDEGRAEFTRAWPAMHDAFEAMFEGIDDAEYAALIATLLKMLKNIRKHDI
>Mature_160_residues
MEQKVAEKRQRISTLGQIGLQQFAPYLMNRIMGRYNATLRDDFRKQGLTIPQVRTLAVLSVTDGVTVNDLSVYTVIEQST
LSRTLDTLEGQGFVRREQGVTDSRIRHVFLTDEGRAEFTRAWPAMHDAFEAMFEGIDDAEYAALIATLLKMLKNIRKHDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18249; Mature: 18249

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQKVAEKRQRISTLGQIGLQQFAPYLMNRIMGRYNATLRDDFRKQGLTIPQVRTLAVLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHEEE
VTDGVTVNDLSVYTVIEQSTLSRTLDTLEGQGFVRREQGVTDSRIRHVFLTDEGRAEFTR
ECCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHEEEEECCCCCHHHHH
AWPAMHDAFEAMFEGIDDAEYAALIATLLKMLKNIRKHDI
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEQKVAEKRQRISTLGQIGLQQFAPYLMNRIMGRYNATLRDDFRKQGLTIPQVRTLAVLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHEEE
VTDGVTVNDLSVYTVIEQSTLSRTLDTLEGQGFVRREQGVTDSRIRHVFLTDEGRAEFTR
ECCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHEEEEECCCCCHHHHH
AWPAMHDAFEAMFEGIDDAEYAALIATLLKMLKNIRKHDI
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA