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The map label for this gene is p49 [H]

Identifier: 13474541

GI number: 13474541

Start: 4358308

End: 4359879

Strand: Direct

Name: p49 [H]

Synonym: mlr5446

Alternate gene names: 13474541

Gene position: 4358308-4359879 (Clockwise)

Preceding gene: 13474540

Following gene: 13474542

Centisome position: 61.94

GC content: 67.24

Gene sequence:

>1572_bases
ATGAAAGCGCCCGATCACATCATCGTCGGCAGCGGCATCAATGCGCTGGTCTGCGCGGCGGTGCTTGGCGGCAAGGGTGC
CAAGGTGCTCGTCCTCGAACGCAACGACCGCATCGGCGGCTGTATGCGCACCGAGGAGATCACTGCGCCCGGCTTCATCC
ATGATGTGATGGCGACGACCTTCGTGCTGTTCATCATCTCGCCGGCCTTTGCGGCATTGGGCGGCGACCTCGCCCGGCAC
GGGCTGGAGTTCTGCCACACCGGCACGCCGACAGGCGTGCTCACCCCCGACGGCAGCCATGCGGTGCTCGCCACCGACCG
CGCCGCCAATGTCGCCGCCCTCAATGCGATCGCGGCGGGTGATGGCGACCGGCATGCCGACGATGTCGGCGGCATCGAGC
GCAATGCCGGCCTGCTGTTCGGCCTGCTCGGCGGCAGCCTGTGGTCCTATCCGACGGCCAAGCTTTTGGCCGGCGATGCC
TGGCGGCGCGGCCCGCGCGGCCTTGCCGCCTTTCTCGGCGAGGCGCTGGCGCCGGCACGCGGCTGGCTGGAAAGCACCTA
CCAGTCCGAAACCATCCGCGCGCTCTGGGCGCCCTGGGTGTTGCATGCCGGGCTTGGGCCGGAAGACGCCTTCTCCGGCC
AGATCGCCAAGGTGATCGCCTTCGCGCTGGAGGCGGCCGGCGCCCCTATCGTCAAGGGCGGGGCGAAGAACCTGCTGTCA
GCCTTCGAGGCGCTGATCACCGAGCGTGGCGGTGTCATCGCCACTGAAGCGGATGTTACCTCCATCATCCTGGCTGGTGG
TCGCGCCACCGGTGTGCGGCTGGCCTCGGGTGAAACGGTGCATGCGAGGAAGAGCGTCATCTGCTCGGTCACGCCGACGC
AGCTTTATGGCCGGCTGCTAGGCAGCGAGGCGCCCAAAGCCGATATCGAGGCAACGCGGAAATACCGATACGGCAAAGGC
AATTTCCAGATCCACTACGCCCTCGACAAGCCGCCGGTGTGGCGCGGCGGAGGGCTGGACAAGGTGGCGCTGCTGCATCT
GACGCCGGGCCTGGATGGGGTGTCGAAAGCCTGCAACGAGGCAGTGCGCGGCTTGCTGCCGGAAGTGCCGACCATCTGCG
TCGGCCAGCCGCATGCGCTCGACCCGTCGCGCTGTCCGGAGGGCAAGGCGATCCTCTGGCTGCAACTGCCCGAGGCGCCG
CGCCACATCAAGGGCGATGCCGCCGGCAAGCTGCAGGCCCCGGCTGACGGGCAATGGACCGACGCATTGCGCGAGGCCTA
TGCCGACCGCGCCGAAGCGATCCTCGCCAGCCATATTGACGGCTTCAAGGACAATGTCATTGCGCGCCGCGCCTATTCCC
CAGCCGACCTCGAAGCGATGAACATCAATCTGGTCGGCGGCGATCCCTATGGCGGTTCCTCGACCATCGACCAGTCCTTC
CTGTGGCGGCCGTTCAAGACCAGCCACAACCACAAGACCGGCATCAAGAACCTATACCATATCGGCGCCTCGACCCATCC
GGGCGCGGGTCTCGGCGGCGGTTCCGGCTTTCTTCTGGCGGGGAGGCTGTGA

Upstream 100 bases:

>100_bases
CGGCAGCCCGATCCGCGCACTGGCGCTGGTCTCGGGAAAATAGAGCGAGGTGGGGTCTTCGGGAGAAGATCATGCGCCCG
ACGGTCGAGAGCAACTCTCA

Downstream 100 bases:

>100_bases
TGGAACAGAAGGTCGCGGAAAAGCGCCAGCGCATTTCGACCCTCGGCCAGATCGGCCTGCAGCAATTCGCGCCCTATCTG
ATGAACCGCATCATGGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MKAPDHIIVGSGINALVCAAVLGGKGAKVLVLERNDRIGGCMRTEEITAPGFIHDVMATTFVLFIISPAFAALGGDLARH
GLEFCHTGTPTGVLTPDGSHAVLATDRAANVAALNAIAAGDGDRHADDVGGIERNAGLLFGLLGGSLWSYPTAKLLAGDA
WRRGPRGLAAFLGEALAPARGWLESTYQSETIRALWAPWVLHAGLGPEDAFSGQIAKVIAFALEAAGAPIVKGGAKNLLS
AFEALITERGGVIATEADVTSIILAGGRATGVRLASGETVHARKSVICSVTPTQLYGRLLGSEAPKADIEATRKYRYGKG
NFQIHYALDKPPVWRGGGLDKVALLHLTPGLDGVSKACNEAVRGLLPEVPTICVGQPHALDPSRCPEGKAILWLQLPEAP
RHIKGDAAGKLQAPADGQWTDALREAYADRAEAILASHIDGFKDNVIARRAYSPADLEAMNINLVGGDPYGGSSTIDQSF
LWRPFKTSHNHKTGIKNLYHIGASTHPGAGLGGGSGFLLAGRL

Sequences:

>Translated_523_residues
MKAPDHIIVGSGINALVCAAVLGGKGAKVLVLERNDRIGGCMRTEEITAPGFIHDVMATTFVLFIISPAFAALGGDLARH
GLEFCHTGTPTGVLTPDGSHAVLATDRAANVAALNAIAAGDGDRHADDVGGIERNAGLLFGLLGGSLWSYPTAKLLAGDA
WRRGPRGLAAFLGEALAPARGWLESTYQSETIRALWAPWVLHAGLGPEDAFSGQIAKVIAFALEAAGAPIVKGGAKNLLS
AFEALITERGGVIATEADVTSIILAGGRATGVRLASGETVHARKSVICSVTPTQLYGRLLGSEAPKADIEATRKYRYGKG
NFQIHYALDKPPVWRGGGLDKVALLHLTPGLDGVSKACNEAVRGLLPEVPTICVGQPHALDPSRCPEGKAILWLQLPEAP
RHIKGDAAGKLQAPADGQWTDALREAYADRAEAILASHIDGFKDNVIARRAYSPADLEAMNINLVGGDPYGGSSTIDQSF
LWRPFKTSHNHKTGIKNLYHIGASTHPGAGLGGGSGFLLAGRL
>Mature_523_residues
MKAPDHIIVGSGINALVCAAVLGGKGAKVLVLERNDRIGGCMRTEEITAPGFIHDVMATTFVLFIISPAFAALGGDLARH
GLEFCHTGTPTGVLTPDGSHAVLATDRAANVAALNAIAAGDGDRHADDVGGIERNAGLLFGLLGGSLWSYPTAKLLAGDA
WRRGPRGLAAFLGEALAPARGWLESTYQSETIRALWAPWVLHAGLGPEDAFSGQIAKVIAFALEAAGAPIVKGGAKNLLS
AFEALITERGGVIATEADVTSIILAGGRATGVRLASGETVHARKSVICSVTPTQLYGRLLGSEAPKADIEATRKYRYGKG
NFQIHYALDKPPVWRGGGLDKVALLHLTPGLDGVSKACNEAVRGLLPEVPTICVGQPHALDPSRCPEGKAILWLQLPEAP
RHIKGDAAGKLQAPADGQWTDALREAYADRAEAILASHIDGFKDNVIARRAYSPADLEAMNINLVGGDPYGGSSTIDQSF
LWRPFKTSHNHKTGIKNLYHIGASTHPGAGLGGGSGFLLAGRL

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI229577391, Length=560, Percent_Identity=26.4285714285714, Blast_Score=113, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI17540238, Length=542, Percent_Identity=25.4612546125461, Blast_Score=123, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54601; Mature: 54601

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAPDHIIVGSGINALVCAAVLGGKGAKVLVLERNDRIGGCMRTEEITAPGFIHDVMATT
CCCCCCEEEECCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
FVLFIISPAFAALGGDLARHGLEFCHTGTPTGVLTPDGSHAVLATDRAANVAALNAIAAG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEECCCCCHHHHHEEECC
DGDRHADDVGGIERNAGLLFGLLGGSLWSYPTAKLLAGDAWRRGPRGLAAFLGEALAPAR
CCCCCCHHCCCCCCCCCEEEEECCCHHHCCCCHHHHCCHHHHCCCHHHHHHHHHHHHHHH
GWLESTYQSETIRALWAPWVLHAGLGPEDAFSGQIAKVIAFALEAAGAPIVKGGAKNLLS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHCCCCEECCCHHHHHH
AFEALITERGGVIATEADVTSIILAGGRATGVRLASGETVHARKSVICSVTPTQLYGRLL
HHHHHHHCCCCEEEECCCCEEEEEECCCCCCEEEECCCEEECCCCEEEEECHHHHHHHHH
GSEAPKADIEATRKYRYGKGNFQIHYALDKPPVWRGGGLDKVALLHLTPGLDGVSKACNE
CCCCCCCHHHHHHHEECCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH
AVRGLLPEVPTICVGQPHALDPSRCPEGKAILWLQLPEAPRHIKGDAAGKLQAPADGQWT
HHHHHCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHH
DALREAYADRAEAILASHIDGFKDNVIARRAYSPADLEAMNINLVGGDPYGGSSTIDQSF
HHHHHHHHHHHHHHHHHHCCCHHHCHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCHHH
LWRPFKTSHNHKTGIKNLYHIGASTHPGAGLGGGSGFLLAGRL
CCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEECCC
>Mature Secondary Structure
MKAPDHIIVGSGINALVCAAVLGGKGAKVLVLERNDRIGGCMRTEEITAPGFIHDVMATT
CCCCCCEEEECCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
FVLFIISPAFAALGGDLARHGLEFCHTGTPTGVLTPDGSHAVLATDRAANVAALNAIAAG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEECCCCCHHHHHEEECC
DGDRHADDVGGIERNAGLLFGLLGGSLWSYPTAKLLAGDAWRRGPRGLAAFLGEALAPAR
CCCCCCHHCCCCCCCCCEEEEECCCHHHCCCCHHHHCCHHHHCCCHHHHHHHHHHHHHHH
GWLESTYQSETIRALWAPWVLHAGLGPEDAFSGQIAKVIAFALEAAGAPIVKGGAKNLLS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHCCCCEECCCHHHHHH
AFEALITERGGVIATEADVTSIILAGGRATGVRLASGETVHARKSVICSVTPTQLYGRLL
HHHHHHHCCCCEEEECCCCEEEEEECCCCCCEEEECCCEEECCCCEEEEECHHHHHHHHH
GSEAPKADIEATRKYRYGKGNFQIHYALDKPPVWRGGGLDKVALLHLTPGLDGVSKACNE
CCCCCCCHHHHHHHEECCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH
AVRGLLPEVPTICVGQPHALDPSRCPEGKAILWLQLPEAPRHIKGDAAGKLQAPADGQWT
HHHHHCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHH
DALREAYADRAEAILASHIDGFKDNVIARRAYSPADLEAMNINLVGGDPYGGSSTIDQSF
HHHHHHHHHHHHHHHHHHCCCHHHCHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCHHH
LWRPFKTSHNHKTGIKNLYHIGASTHPGAGLGGGSGFLLAGRL
CCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3453116 [H]