| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is chrB1 [H]
Identifier: 13474507
GI number: 13474507
Start: 4321102
End: 4321929
Strand: Direct
Name: chrB1 [H]
Synonym: mlr5406
Alternate gene names: 13474507
Gene position: 4321102-4321929 (Clockwise)
Preceding gene: 13474506
Following gene: 13474508
Centisome position: 61.41
GC content: 63.04
Gene sequence:
>828_bases GTGGACGCCATGCCGTCAACAACCGCTATCACCGTATCGCAACTGTCCCGTCTGGTCGGCCTGCCGGGAGTCCCGGTAAT CATCGATGTTCGCATCGATGAGGATTTCGACGCCGATCCGCGCCTGCTGCCGGCCTCGATCCGGCGCGACTTCAAAACCG TTTCGACCTGGGCGCCCGATTTCGCCGGCAAGCCTGTGGTGGTCGTCTGCCAGAAAGGCCTGAAGCTCTCGCAAGGTGTC GCCGCATGGCTGCGCCATGAGGGGATTCCCGCCGAATCCCTTGAAGGCGGGTTCGAAGCCTGGCGCGAGGCAGACGGGCT TTTGGTCAGCACCGACAAATTGCCGCCGCGCGACGAAAAGGGCCGCACCGTATGGGTGACGCGGTCACGCCCGAAGGTCG ACCGCATCGCTTGCCCCTGGCTGATCCGGCGTTTCGTTGATCCCCGCGCGGTCTTCCTGTTTGTCGAGGCGGCCGAAGTG CCTGCTGTCGCCGACCGCTTTCAGGCCGTGCCTTTCGACATCGACAATGTGTTCTGGAGCCATCGCGGTGAACGCTGCAC CTTCGATACGATGATCGAAGAATTCGGACTGGAATCCACCGCGCTCGACCGCCTTGCCGCGATCGTGCGCGCTGCCGACA CCGCAAGGCTCGATCTGGTGCCCCAGGCCGCCGGCTTTCTGGCTGCCTCGCTTGGCCTGTCGCGGATGTTTCGTGACGAT CTGGAACAATTGGAAGCAGGCATGCTGCTCTATGATGCGTTCTTCCGCTGGTGCCGCGACGCCACCGAGGAAACGCACAA TTGGCCCAGCGCAGGTAAACCGTCATGA
Upstream 100 bases:
>100_bases CAAGCGCGCCCAACAAATCCACGATCATGACAAGGGGTGCATCGCGACGACCCCGTGAGGCGTCAGCCCAACGTTCGCGT CCAAGCTTCTCTATCAGGAG
Downstream 100 bases:
>100_bases GCGCCGTTGTGCCTGCGCACAGGTCGGGGAATGTCGAGGCGCCGGCTGCGCCGACCTTTGCCGAAGCCGTAAAGGTCTGG GCGAAGATCGGACTGCTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MDAMPSTTAITVSQLSRLVGLPGVPVIIDVRIDEDFDADPRLLPASIRRDFKTVSTWAPDFAGKPVVVVCQKGLKLSQGV AAWLRHEGIPAESLEGGFEAWREADGLLVSTDKLPPRDEKGRTVWVTRSRPKVDRIACPWLIRRFVDPRAVFLFVEAAEV PAVADRFQAVPFDIDNVFWSHRGERCTFDTMIEEFGLESTALDRLAAIVRAADTARLDLVPQAAGFLAASLGLSRMFRDD LEQLEAGMLLYDAFFRWCRDATEETHNWPSAGKPS
Sequences:
>Translated_275_residues MDAMPSTTAITVSQLSRLVGLPGVPVIIDVRIDEDFDADPRLLPASIRRDFKTVSTWAPDFAGKPVVVVCQKGLKLSQGV AAWLRHEGIPAESLEGGFEAWREADGLLVSTDKLPPRDEKGRTVWVTRSRPKVDRIACPWLIRRFVDPRAVFLFVEAAEV PAVADRFQAVPFDIDNVFWSHRGERCTFDTMIEEFGLESTALDRLAAIVRAADTARLDLVPQAAGFLAASLGLSRMFRDD LEQLEAGMLLYDAFFRWCRDATEETHNWPSAGKPS >Mature_275_residues MDAMPSTTAITVSQLSRLVGLPGVPVIIDVRIDEDFDADPRLLPASIRRDFKTVSTWAPDFAGKPVVVVCQKGLKLSQGV AAWLRHEGIPAESLEGGFEAWREADGLLVSTDKLPPRDEKGRTVWVTRSRPKVDRIACPWLIRRFVDPRAVFLFVEAAEV PAVADRFQAVPFDIDNVFWSHRGERCTFDTMIEEFGLESTALDRLAAIVRAADTARLDLVPQAAGFLAASLGLSRMFRDD LEQLEAGMLLYDAFFRWCRDATEETHNWPSAGKPS
Specific function: Together with ChrA1, this protein reduces chromate accumulation and is essential for chromate resistance, possibly as a regulatory protein [H]
COG id: COG4275
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018634 [H]
Pfam domain/function: PF09828 Chrome_Resist [H]
EC number: NA
Molecular weight: Translated: 30613; Mature: 30613
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAMPSTTAITVSQLSRLVGLPGVPVIIDVRIDEDFDADPRLLPASIRRDFKTVSTWAPD CCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCC FAGKPVVVVCQKGLKLSQGVAAWLRHEGIPAESLEGGFEAWREADGLLVSTDKLPPRDEK CCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCC GRTVWVTRSRPKVDRIACPWLIRRFVDPRAVFLFVEAAEVPAVADRFQAVPFDIDNVFWS CCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCCCCCHHHHHHH HRGERCTFDTMIEEFGLESTALDRLAAIVRAADTARLDLVPQAAGFLAASLGLSRMFRDD CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHEECCHHHHHHHHHHHHHHHHHHHH LEQLEAGMLLYDAFFRWCRDATEETHNWPSAGKPS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MDAMPSTTAITVSQLSRLVGLPGVPVIIDVRIDEDFDADPRLLPASIRRDFKTVSTWAPD CCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCC FAGKPVVVVCQKGLKLSQGVAAWLRHEGIPAESLEGGFEAWREADGLLVSTDKLPPRDEK CCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCC GRTVWVTRSRPKVDRIACPWLIRRFVDPRAVFLFVEAAEVPAVADRFQAVPFDIDNVFWS CCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCCCCCHHHHHHH HRGERCTFDTMIEEFGLESTALDRLAAIVRAADTARLDLVPQAAGFLAASLGLSRMFRDD CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHEECCHHHHHHHHHHHHHHHHHHHH LEQLEAGMLLYDAFFRWCRDATEETHNWPSAGKPS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2180932; 12471500 [H]