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The map label for this gene is yedA [H]

Identifier: 13474452

GI number: 13474452

Start: 4265002

End: 4265769

Strand: Direct

Name: yedA [H]

Synonym: mlr5337

Alternate gene names: 13474452

Gene position: 4265002-4265769 (Clockwise)

Preceding gene: 13474448

Following gene: 13474453

Centisome position: 60.62

GC content: 67.84

Gene sequence:

>768_bases
TTGATCGCCGGCGGCATCCTGTTTGCTATCATCCGCTGGCGCGGACTTGCCATGCCGGGCGATACCGCCACCTGGCGCCG
CTTCGCCTTCCAGGCCTGCCTCAACAGCGTCATACCGTTCACGTTGATCGCTGCGGCCGAGCGCTCGGTCGATGCCGGCC
TCGCGACCATCCTCAATGCAACCTCGCCGATCTTCACCTTCCTCCTCACCGCTCTGATCACCCGCCATGAGCCGGTCACG
GCACGCAAGCTGATCGGTGTCGGCGCCGGCATAGCCGGCATCTGCCTCATCGTCGGCACCGAGGCGCTGGGTGGCATCGG
CCACGAATTGTGGGCGCAGGTCGCCATCGTCGCGGCAACGATCTGCTATGCCGGCGCCGCCATCTTCGGCCGAGGCTTCA
AGGGCCTCGATCCGATGCTGCCGGCGGCCGGCTCGATGCTGTGCGGTGCGGTCATGCTGGTGCCGCTCAGCCTGGTGGCC
GATCAGCCCTGGGCGCTCACGCCGTCGACGGCGTCGATCCTGGCCCTGCTCGGCCTGTCGGTGTTCTCGACCGCGCTCGC
CTTCGTCATCTATTTCCGCCTCATCCACACGCTGGGGTCCGTCGGCACGACGTCGCAGGCCTATCTGCGCGTGCCGATCG
GCGTCGGCATCGGCGCCATCTTCCTCGGCGAAAGCCTGGGGCCGACGGCATGGCTGGGCATGGCCTTCGTCGTGGCCGGC
GTCGCGGCCATGACCATTCCGGTCCGTAAGCCGGCCTTCACCCGTTAG

Upstream 100 bases:

>100_bases
TTGCTCGGCGTGCTGGCGGTGCTGTGGGGAGCCTCCTACACCTTCATCAAGATCGGCGTCGAGACCATCCCACCCAGTCA
CCTTCATCGCCGCCCGCACC

Downstream 100 bases:

>100_bases
GCGCCCCGATTTACTTGTGCTCTAGCCTCGCGCTGCCTATCTCGGGGAGCGTCCCGCCTGTCGGCGGTGTTCGCTGACCT
GGGGTTGAAGCACGGTGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MIAGGILFAIIRWRGLAMPGDTATWRRFAFQACLNSVIPFTLIAAAERSVDAGLATILNATSPIFTFLLTALITRHEPVT
ARKLIGVGAGIAGICLIVGTEALGGIGHELWAQVAIVAATICYAGAAIFGRGFKGLDPMLPAAGSMLCGAVMLVPLSLVA
DQPWALTPSTASILALLGLSVFSTALAFVIYFRLIHTLGSVGTTSQAYLRVPIGVGIGAIFLGESLGPTAWLGMAFVVAG
VAAMTIPVRKPAFTR

Sequences:

>Translated_255_residues
MIAGGILFAIIRWRGLAMPGDTATWRRFAFQACLNSVIPFTLIAAAERSVDAGLATILNATSPIFTFLLTALITRHEPVT
ARKLIGVGAGIAGICLIVGTEALGGIGHELWAQVAIVAATICYAGAAIFGRGFKGLDPMLPAAGSMLCGAVMLVPLSLVA
DQPWALTPSTASILALLGLSVFSTALAFVIYFRLIHTLGSVGTTSQAYLRVPIGVGIGAIFLGESLGPTAWLGMAFVVAG
VAAMTIPVRKPAFTR
>Mature_255_residues
MIAGGILFAIIRWRGLAMPGDTATWRRFAFQACLNSVIPFTLIAAAERSVDAGLATILNATSPIFTFLLTALITRHEPVT
ARKLIGVGAGIAGICLIVGTEALGGIGHELWAQVAIVAATICYAGAAIFGRGFKGLDPMLPAAGSMLCGAVMLVPLSLVA
DQPWALTPSTASILALLGLSVFSTALAFVIYFRLIHTLGSVGTTSQAYLRVPIGVGIGAIFLGESLGPTAWLGMAFVVAG
VAAMTIPVRKPAFTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1788269, Length=204, Percent_Identity=27.4509803921569, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 26353; Mature: 26353

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAGGILFAIIRWRGLAMPGDTATWRRFAFQACLNSVIPFTLIAAAERSVDAGLATILNA
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TSPIFTFLLTALITRHEPVTARKLIGVGAGIAGICLIVGTEALGGIGHELWAQVAIVAAT
CHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ICYAGAAIFGRGFKGLDPMLPAAGSMLCGAVMLVPLSLVADQPWALTPSTASILALLGLS
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
VFSTALAFVIYFRLIHTLGSVGTTSQAYLRVPIGVGIGAIFLGESLGPTAWLGMAFVVAG
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHCHHHHHHCCCCCHHHHHHHHHHHHH
VAAMTIPVRKPAFTR
HHHHHCCCCCCCCCC
>Mature Secondary Structure
MIAGGILFAIIRWRGLAMPGDTATWRRFAFQACLNSVIPFTLIAAAERSVDAGLATILNA
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TSPIFTFLLTALITRHEPVTARKLIGVGAGIAGICLIVGTEALGGIGHELWAQVAIVAAT
CHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ICYAGAAIFGRGFKGLDPMLPAAGSMLCGAVMLVPLSLVADQPWALTPSTASILALLGLS
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
VFSTALAFVIYFRLIHTLGSVGTTSQAYLRVPIGVGIGAIFLGESLGPTAWLGMAFVVAG
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHCHHHHHHCCCCCHHHHHHHHHHHHH
VAAMTIPVRKPAFTR
HHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]