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The map label for this gene is regB [H]

Identifier: 13474427

GI number: 13474427

Start: 4234631

End: 4235962

Strand: Direct

Name: regB [H]

Synonym: mlr5307

Alternate gene names: 13474427

Gene position: 4234631-4235962 (Clockwise)

Preceding gene: 13474426

Following gene: 13474428

Centisome position: 60.18

GC content: 65.47

Gene sequence:

>1332_bases
ATGGCCATGATCAACATCCTGAACGCGCCCGATTTCCAGCAGAGCCAGCGGCTGCGCCTCAACACGCTGATCCGGCTGCG
CTGGCTGGCCATTGTCGGCCAGAGCGTGGCGGTGCTCGTCGTCGCCTATGGGTTGAAATTTCCGCTCCCGGTCAGCCTGT
GTTTTGCGCTGATCGCCTGTTCGGCCTGGATGAACCTGTTCCTGGCCTTCAGGTTTCCAGCGGCGCACCGGCTCACCCCG
TTCGCCGCCTTCGGCATCCTGATCTTCGACAGCCTGCAGCTTGCCGGGCTGCTCTATATGACCGGCGGCCTGACCAATCC
GTTCTCGCTGCTGATGACCGTGCCTGTCGTCATTTCGGCGACGTCGCTGCCCCTGCGCCTCACCGCCATCCTCGGCGGGC
TGGTGATGCTGGCGGCGACCTTGCTGGTGTTCTTCCATCTGCCCTTGCCCTGGTATGAAGGCGCGCCGCTGGCCATGCCT
TTCATTTACGTCGCCGGCATGTGGATGGCGGTGCTGTCCTCGATCGCCTTCACCGCCATGTATGCCTTTCGGGTGGCCGC
CGAGGCGCGGCTTTTGGCCAATGCGCTTGCCGCCACCGAACTGGTGCTGCAGCGCGAACAGCACCTTTCGGCGCTCGACG
GCCTGGCGGCCGCGGCCGCGCATGAGCTCGGCACGCCGCTCGCCACCATCACGCTCGTCGCCAAGGAGATGGAAAAGGCG
CTCGGCAGCGACCCGAAATATGGGGAAGACGTGAAGCTGCTGCGCTCGCAAAGCGAACGTTGCCGCGAAATCCTCAAGCG
CCTGACCAGCCTGTCGTCTGAGGGCGAGGCGCATCTGTCCCGCTTGCCGCTAACCTCGCTGGTCGAGGAGGTCACCGCGC
CGCATCGCGACTTCGGCATCTCGATCAAGCTTCGCCCGGGCGAACGCACCGGGCCGGAGCCGGTCGGGCGCCGCAATCCG
GGCGTGATCTACGGCCTCGGCAATCTGGTCGAGAACGCCGTCGACTTCGCCCGCAAGAGCGTCACCGTGCGCTGGAGCTG
GGACGAGGCGACCGTCATCTTCTCGATCATCGATGACGGGCCTGGTTTCCCACCCGAAATCATCGACCGCATTGGCGAGC
CCTATATGTCGACGCGTCAGGGCACCGAGGCCGGCGGCGGCCTGGGACTCGGCCTGTTCATCGCCAAGACTCTGCTCGAA
CGCTCGGGCGCCACGCTCGACTTCCGCAATTCGAGCGGCCTGGGCGAGGGCGCCGTGGTGCAGATTTCATGGCCGAGATC
GGTCTTCCTGAACCCGGGAACGGCCCCGGCCACCATGTTTGACACTGCGTAG

Upstream 100 bases:

>100_bases
ATCCCAAACATGTCTGGCCGGAAAATCCGCTGCTTGCCGCCGCCACCGCCCGTGCCAAGCCGCGCGGCACCTAGCGCTTG
CCCTCAAGCGGCTGTAATCC

Downstream 100 bases:

>100_bases
ATTGGACAATAGCGGCGCAAAACTATATCTGCGTAAAATTAAGGCAGCAGGAATTCTTACGACGATGACAGGCGATGAAA
ATATTGGCGCAATGGTTGAA

Product: two-component, sensor histidine protein kinase

Products: NA

Alternate protein names: Protein prrB [H]

Number of amino acids: Translated: 443; Mature: 442

Protein sequence:

>443_residues
MAMINILNAPDFQQSQRLRLNTLIRLRWLAIVGQSVAVLVVAYGLKFPLPVSLCFALIACSAWMNLFLAFRFPAAHRLTP
FAAFGILIFDSLQLAGLLYMTGGLTNPFSLLMTVPVVISATSLPLRLTAILGGLVMLAATLLVFFHLPLPWYEGAPLAMP
FIYVAGMWMAVLSSIAFTAMYAFRVAAEARLLANALAATELVLQREQHLSALDGLAAAAAHELGTPLATITLVAKEMEKA
LGSDPKYGEDVKLLRSQSERCREILKRLTSLSSEGEAHLSRLPLTSLVEEVTAPHRDFGISIKLRPGERTGPEPVGRRNP
GVIYGLGNLVENAVDFARKSVTVRWSWDEATVIFSIIDDGPGFPPEIIDRIGEPYMSTRQGTEAGGGLGLGLFIAKTLLE
RSGATLDFRNSSGLGEGAVVQISWPRSVFLNPGTAPATMFDTA

Sequences:

>Translated_443_residues
MAMINILNAPDFQQSQRLRLNTLIRLRWLAIVGQSVAVLVVAYGLKFPLPVSLCFALIACSAWMNLFLAFRFPAAHRLTP
FAAFGILIFDSLQLAGLLYMTGGLTNPFSLLMTVPVVISATSLPLRLTAILGGLVMLAATLLVFFHLPLPWYEGAPLAMP
FIYVAGMWMAVLSSIAFTAMYAFRVAAEARLLANALAATELVLQREQHLSALDGLAAAAAHELGTPLATITLVAKEMEKA
LGSDPKYGEDVKLLRSQSERCREILKRLTSLSSEGEAHLSRLPLTSLVEEVTAPHRDFGISIKLRPGERTGPEPVGRRNP
GVIYGLGNLVENAVDFARKSVTVRWSWDEATVIFSIIDDGPGFPPEIIDRIGEPYMSTRQGTEAGGGLGLGLFIAKTLLE
RSGATLDFRNSSGLGEGAVVQISWPRSVFLNPGTAPATMFDTA
>Mature_442_residues
AMINILNAPDFQQSQRLRLNTLIRLRWLAIVGQSVAVLVVAYGLKFPLPVSLCFALIACSAWMNLFLAFRFPAAHRLTPF
AAFGILIFDSLQLAGLLYMTGGLTNPFSLLMTVPVVISATSLPLRLTAILGGLVMLAATLLVFFHLPLPWYEGAPLAMPF
IYVAGMWMAVLSSIAFTAMYAFRVAAEARLLANALAATELVLQREQHLSALDGLAAAAAHELGTPLATITLVAKEMEKAL
GSDPKYGEDVKLLRSQSERCREILKRLTSLSSEGEAHLSRLPLTSLVEEVTAPHRDFGISIKLRPGERTGPEPVGRRNPG
VIYGLGNLVENAVDFARKSVTVRWSWDEATVIFSIIDDGPGFPPEIIDRIGEPYMSTRQGTEAGGGLGLGLFIAKTLLER
SGATLDFRNSSGLGEGAVVQISWPRSVFLNPGTAPATMFDTA

Specific function: Member of the two-component regulatory system RegB/RegA. Involved in the positive regulation of photosynthesis gene expression in response to anaerobiosis. Also involved in positive regulation of the cbbI and cbbII Calvin cycle CO2 fixation operons, as we

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 47880; Mature: 47748

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EEECCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
AMINILNAPDFQQSQRLRLNTLIRLRWLAIVGQSVAVLVVAYGLKFPLPVSLCFALIAC
CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHH
SAWMNLFLAFRFPAAHRLTPFAAFGILIFDSLQLAGLLYMTGGLTNPFSLLMTVPVVISA
HHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
TSLPLRLTAILGGLVMLAATLLVFFHLPLPWYEGAPLAMPFIYVAGMWMAVLSSIAFTAM
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
YAFRVAAEARLLANALAATELVLQREQHLSALDGLAAAAAHELGTPLATITLVAKEMEKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LGSDPKYGEDVKLLRSQSERCREILKRLTSLSSEGEAHLSRLPLTSLVEEVTAPHRDFGI
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHCCCCCCCCE
SIKLRPGERTGPEPVGRRNPGVIYGLGNLVENAVDFARKSVTVRWSWDEATVIFSIIDDG
EEEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCEEEEEECCCEEEEEEEECCC
PGFPPEIIDRIGEPYMSTRQGTEAGGGLGLGLFIAKTLLERSGATLDFRNSSGLGEGAVV
CCCCHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEE
QISWPRSVFLNPGTAPATMFDTA
EEECCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7751278; 10358089 [H]