| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is exoO [H]
Identifier: 13474399
GI number: 13474399
Start: 4204894
End: 4205862
Strand: Direct
Name: exoO [H]
Synonym: mlr5274
Alternate gene names: 13474399
Gene position: 4204894-4205862 (Clockwise)
Preceding gene: 13474398
Following gene: 13474400
Centisome position: 59.76
GC content: 64.4
Gene sequence:
>969_bases GTGCAGCCTGACGTTTCCTTCGCCCCCGATGTTTCCTTTGTGATCGCCTCCTACAATGCCGAGGCGACGCTCGACCGTGC GATTGCCAGCGCCATTGCGCAGAAGGGTGTTAGTGTCGAGATCATCGTCGTCGACGACCAGTCGCGCGACGCCACGCTCG ATGTGGCGCGGGCCTATCCTGGGGACATTGTGCGCGTCGTCGCGCTTGCCAAGAATCGCGGTCCTGGCGGCGCCCGGAAT GCCGGGCTCGACGTCGCGCGCGGCAGGTGGATCGCGGTTCTCGATTCCGACGATGCCGTCTTTCCCGGCCGTCTCGCCGC CATGATCAGCCGCGCCGAGAAAGCGGATGCCCAGATCGCCGTCGACAATCTCCAGGTCATCCGCGAGGATGGCGTTGTCG AGGATGCGATGTTCCCGCGTCAGTATCTGGAAGGCCTGCGCGAGATCTCGCTGGCCACCTATATTGCCGGCAACGTCGTC TTCGAATCGAAGTTCAATCTCGGCTACCTCAAGCCTATCTTCCAGCGCCGGTTCCTCGATGAAAACCGGCTTCGCTATGA CGAGCAACTGAGGATCGGCGAGGACTACATCCTGTTTGCCGAGGCCCTCGCCAAGGGCGGCAGATGCGTGGTCGAGCCGG CGATCGGCTACGCCTATCATATTCGCAGCGGCTCCATCTCGCGCGTGCTCGAGCTTCACCATGTCGAAGCGATGCGCAAG GCGGATGCCGTATTCGCTCAGACCCATCGGATGGACGAGGCGGCCCAGGTGGCCTTTGCCCGGCGCGGCCGCAGCCTGCG CAAGGCAGCCTCCTTCCTGGCGATGGTACAGCACATCAAGGCGCGGTCCCCGCTCAAGGCGATCCGGACGGCGCTCAGCG ACCCGGCGGCGGTAAGGCATATGGGCATGCCGATCGCCGTGCGGTTGCGACGAGTAGCGGCACAGTTTGCCGTGGGGGCG GGGAGGTGA
Upstream 100 bases:
>100_bases GTGCTGCGCGGCATCATGCATGTCGGCGTCGTCAGTGGCCTTGTCGGCGTCCGCGAACTCCGCCTCTACGGTCAATCGTC ACCTGGGGAAGGAGGCAAGC
Downstream 100 bases:
>100_bases AGATGCAGGCACATGGAGGGGTTTTTCGTGGCCTGTGAATGGACTGAAGTCGATCTCCTCAGAAGGAATTTGCGATGAAG AAAATCAGGAAGGCCGTGAT
Product: glycosyltransferase, succinoglycan biosynthesis protein EXOO
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MQPDVSFAPDVSFVIASYNAEATLDRAIASAIAQKGVSVEIIVVDDQSRDATLDVARAYPGDIVRVVALAKNRGPGGARN AGLDVARGRWIAVLDSDDAVFPGRLAAMISRAEKADAQIAVDNLQVIREDGVVEDAMFPRQYLEGLREISLATYIAGNVV FESKFNLGYLKPIFQRRFLDENRLRYDEQLRIGEDYILFAEALAKGGRCVVEPAIGYAYHIRSGSISRVLELHHVEAMRK ADAVFAQTHRMDEAAQVAFARRGRSLRKAASFLAMVQHIKARSPLKAIRTALSDPAAVRHMGMPIAVRLRRVAAQFAVGA GR
Sequences:
>Translated_322_residues MQPDVSFAPDVSFVIASYNAEATLDRAIASAIAQKGVSVEIIVVDDQSRDATLDVARAYPGDIVRVVALAKNRGPGGARN AGLDVARGRWIAVLDSDDAVFPGRLAAMISRAEKADAQIAVDNLQVIREDGVVEDAMFPRQYLEGLREISLATYIAGNVV FESKFNLGYLKPIFQRRFLDENRLRYDEQLRIGEDYILFAEALAKGGRCVVEPAIGYAYHIRSGSISRVLELHHVEAMRK ADAVFAQTHRMDEAAQVAFARRGRSLRKAASFLAMVQHIKARSPLKAIRTALSDPAAVRHMGMPIAVRLRRVAAQFAVGA GR >Mature_322_residues MQPDVSFAPDVSFVIASYNAEATLDRAIASAIAQKGVSVEIIVVDDQSRDATLDVARAYPGDIVRVVALAKNRGPGGARN AGLDVARGRWIAVLDSDDAVFPGRLAAMISRAEKADAQIAVDNLQVIREDGVVEDAMFPRQYLEGLREISLATYIAGNVV FESKFNLGYLKPIFQRRFLDENRLRYDEQLRIGEDYILFAEALAKGGRCVVEPAIGYAYHIRSGSISRVLELHHVEAMRK ADAVFAQTHRMDEAAQVAFARRGRSLRKAASFLAMVQHIKARSPLKAIRTALSDPAAVRHMGMPIAVRLRRVAAQFAVGA GR
Specific function: Glycosyltransferase required for the synthesis of succinoglycan (EPS I). Needed for the addition of the fifth sugar (glucose), catalyzes the formation of a beta-1,6 linkage between the fourth and fifth sugar [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1790044, Length=123, Percent_Identity=32.520325203252, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 35273; Mature: 35273
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPDVSFAPDVSFVIASYNAEATLDRAIASAIAQKGVSVEIIVVDDQSRDATLDVARAYP CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHCCC GDIVRVVALAKNRGPGGARNAGLDVARGRWIAVLDSDDAVFPGRLAAMISRAEKADAQIA CHHHHHHHHHHCCCCCCCCCCCCEECCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEE VDNLQVIREDGVVEDAMFPRQYLEGLREISLATYIAGNVVFESKFNLGYLKPIFQRRFLD HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHCC ENRLRYDEQLRIGEDYILFAEALAKGGRCVVEPAIGYAYHIRSGSISRVLELHHVEAMRK HHHCCCCHHHCCCCHHHHHHHHHHCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHH ADAVFAQTHRMDEAAQVAFARRGRSLRKAASFLAMVQHIKARSPLKAIRTALSDPAAVRH HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHH MGMPIAVRLRRVAAQFAVGAGR CCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQPDVSFAPDVSFVIASYNAEATLDRAIASAIAQKGVSVEIIVVDDQSRDATLDVARAYP CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHCCC GDIVRVVALAKNRGPGGARNAGLDVARGRWIAVLDSDDAVFPGRLAAMISRAEKADAQIA CHHHHHHHHHHCCCCCCCCCCCCEECCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEE VDNLQVIREDGVVEDAMFPRQYLEGLREISLATYIAGNVVFESKFNLGYLKPIFQRRFLD HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHCC ENRLRYDEQLRIGEDYILFAEALAKGGRCVVEPAIGYAYHIRSGSISRVLELHHVEAMRK HHHCCCCHHHCCCCHHHHHHHHHHCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHH ADAVFAQTHRMDEAAQVAFARRGRSLRKAASFLAMVQHIKARSPLKAIRTALSDPAAVRH HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHH MGMPIAVRLRRVAAQFAVGAGR CCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8226645; 8246891; 11481431 [H]