Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is exoM [H]

Identifier: 13474398

GI number: 13474398

Start: 4203954

End: 4204904

Strand: Direct

Name: exoM [H]

Synonym: mlr5273

Alternate gene names: 13474398

Gene position: 4203954-4204904 (Clockwise)

Preceding gene: 13474397

Following gene: 13474399

Centisome position: 59.75

GC content: 66.77

Gene sequence:

>951_bases
ATGGTGGTTCAGGCCAAGAACCGCAGCATCGACATCGGCGTGTGCACGTTCCGCCGGCCAGAACTGGCCGACACACTGCG
CTCGCTCGCCGCCATGGCGATGCCTGAAGGTTTCGATGTCAGCGTCATTGTCGCCGACAATGACGACACGCCGAGCGCAC
AGGCCTTGGTGACGGCGCTGTCGCAGGAACTGGCGCTGCCGGTCCGCTACCGGCATGCCCCAGCGCGCAACATTTCGGTC
GCCCGCAACGCTTGCCTCGATGCCAGCGAGGCGGATTTCCTCGCCTTCATCGATGACGACGAGACTGCCTCCACCCGTTG
GCTGGCCGAACTGGTGGCGAAGGCTGAGGACAGTGGTGCAACGGCGGTGCTCGGTCCGGTGCGGGCACTCTACCGCCCGG
ATGCACCCGAATGGATGCGGCGGGGCGATTTTCACTCGACCTTGCCGGTTTGGGTGCGCGGCGAAATCCGCACCGGCTAC
ACCTGCAACGTCCTGCTGCGCATGCGGTCGGACAGCCTGCGCGGCCGTCGCTTCAGCCTGGCGCGCGGCCAGACCGGCGG
CGAGGACACCGAACTCTTCGATCAGATGGTCAAGGCCGGCGGCCGCATCGCCTTCGCTCAAGACGCCTGGGTGGACGAGG
TGGTGCCGCGCTCAAGGGCCGCGTTCGACTGGCTCGGCCGCCGTCGTTTTCGCGTCGGCCAGACGCACGGTCACCTCTTG
GGCAGCAATGCGCGTGGCATCGGGCTGATCAAGCATGTCGGCCTGGCCACCGCAAAGGCAGCCTTTTGTTTTGCCGCAGC
CCTTCCCGTCGTCGCCAGCCCGGTGCGCAGGAACCGCAGCGTGCTGCGCGGCATCATGCATGTCGGCGTCGTCAGTGGCC
TTGTCGGCGTCCGCGAACTCCGCCTCTACGGTCAATCGTCACCTGGGGAAGGAGGCAAGCGTGCAGCCTGA

Upstream 100 bases:

>100_bases
TCGCGCTGGCCGGCGTCTCGGCCATGGTCATGCATTTCGGCTGGTCCGTCGGCTTCTGGCTGCAGCTTCTCGGCCTCGGC
GCGCGACGCGGGGTGGCGTG

Downstream 100 bases:

>100_bases
CGTTTCCTTCGCCCCCGATGTTTCCTTTGTGATCGCCTCCTACAATGCCGAGGCGACGCTCGACCGTGCGATTGCCAGCG
CCATTGCGCAGAAGGGTGTT

Product: glycosyltransferase, succinoglycan biosynthesis protein EXOM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MVVQAKNRSIDIGVCTFRRPELADTLRSLAAMAMPEGFDVSVIVADNDDTPSAQALVTALSQELALPVRYRHAPARNISV
ARNACLDASEADFLAFIDDDETASTRWLAELVAKAEDSGATAVLGPVRALYRPDAPEWMRRGDFHSTLPVWVRGEIRTGY
TCNVLLRMRSDSLRGRRFSLARGQTGGEDTELFDQMVKAGGRIAFAQDAWVDEVVPRSRAAFDWLGRRRFRVGQTHGHLL
GSNARGIGLIKHVGLATAKAAFCFAAALPVVASPVRRNRSVLRGIMHVGVVSGLVGVRELRLYGQSSPGEGGKRAA

Sequences:

>Translated_316_residues
MVVQAKNRSIDIGVCTFRRPELADTLRSLAAMAMPEGFDVSVIVADNDDTPSAQALVTALSQELALPVRYRHAPARNISV
ARNACLDASEADFLAFIDDDETASTRWLAELVAKAEDSGATAVLGPVRALYRPDAPEWMRRGDFHSTLPVWVRGEIRTGY
TCNVLLRMRSDSLRGRRFSLARGQTGGEDTELFDQMVKAGGRIAFAQDAWVDEVVPRSRAAFDWLGRRRFRVGQTHGHLL
GSNARGIGLIKHVGLATAKAAFCFAAALPVVASPVRRNRSVLRGIMHVGVVSGLVGVRELRLYGQSSPGEGGKRAA
>Mature_316_residues
MVVQAKNRSIDIGVCTFRRPELADTLRSLAAMAMPEGFDVSVIVADNDDTPSAQALVTALSQELALPVRYRHAPARNISV
ARNACLDASEADFLAFIDDDETASTRWLAELVAKAEDSGATAVLGPVRALYRPDAPEWMRRGDFHSTLPVWVRGEIRTGY
TCNVLLRMRSDSLRGRRFSLARGQTGGEDTELFDQMVKAGGRIAFAQDAWVDEVVPRSRAAFDWLGRRRFRVGQTHGHLL
GSNARGIGLIKHVGLATAKAAFCFAAALPVVASPVRRNRSVLRGIMHVGVVSGLVGVRELRLYGQSSPGEGGKRAA

Specific function: Glycosyltransferase required for the synthesis of succinoglycan (EPS I). Needed for the addition of the fourth sugar (glucose), catalyzes the formation of a beta-1,4 linkage between the third acetylated sugar and the fourth sugar [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 34308; Mature: 34308

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVQAKNRSIDIGVCTFRRPELADTLRSLAAMAMPEGFDVSVIVADNDDTPSAQALVTAL
CEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHH
SQELALPVRYRHAPARNISVARNACLDASEADFLAFIDDDETASTRWLAELVAKAEDSGA
HHHHCCCHHCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCC
TAVLGPVRALYRPDAPEWMRRGDFHSTLPVWVRGEIRTGYTCNVLLRMRSDSLRGRRFSL
EEHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCEEEE
ARGQTGGEDTELFDQMVKAGGRIAFAQDAWVDEVVPRSRAAFDWLGRRRFRVGQTHGHLL
CCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEE
GSNARGIGLIKHVGLATAKAAFCFAAALPVVASPVRRNRSVLRGIMHVGVVSGLVGVREL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLYGQSSPGEGGKRAA
HHCCCCCCCCCCCCCC
>Mature Secondary Structure
MVVQAKNRSIDIGVCTFRRPELADTLRSLAAMAMPEGFDVSVIVADNDDTPSAQALVTAL
CEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHH
SQELALPVRYRHAPARNISVARNACLDASEADFLAFIDDDETASTRWLAELVAKAEDSGA
HHHHCCCHHCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCC
TAVLGPVRALYRPDAPEWMRRGDFHSTLPVWVRGEIRTGYTCNVLLRMRSDSLRGRRFSL
EEHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCEEEE
ARGQTGGEDTELFDQMVKAGGRIAFAQDAWVDEVVPRSRAAFDWLGRRRFRVGQTHGHLL
CCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEE
GSNARGIGLIKHVGLATAKAAFCFAAALPVVASPVRRNRSVLRGIMHVGVVSGLVGVREL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLYGQSSPGEGGKRAA
HHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8226645; 8246891; 11481431 [H]