| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is exoM [H]
Identifier: 13474398
GI number: 13474398
Start: 4203954
End: 4204904
Strand: Direct
Name: exoM [H]
Synonym: mlr5273
Alternate gene names: 13474398
Gene position: 4203954-4204904 (Clockwise)
Preceding gene: 13474397
Following gene: 13474399
Centisome position: 59.75
GC content: 66.77
Gene sequence:
>951_bases ATGGTGGTTCAGGCCAAGAACCGCAGCATCGACATCGGCGTGTGCACGTTCCGCCGGCCAGAACTGGCCGACACACTGCG CTCGCTCGCCGCCATGGCGATGCCTGAAGGTTTCGATGTCAGCGTCATTGTCGCCGACAATGACGACACGCCGAGCGCAC AGGCCTTGGTGACGGCGCTGTCGCAGGAACTGGCGCTGCCGGTCCGCTACCGGCATGCCCCAGCGCGCAACATTTCGGTC GCCCGCAACGCTTGCCTCGATGCCAGCGAGGCGGATTTCCTCGCCTTCATCGATGACGACGAGACTGCCTCCACCCGTTG GCTGGCCGAACTGGTGGCGAAGGCTGAGGACAGTGGTGCAACGGCGGTGCTCGGTCCGGTGCGGGCACTCTACCGCCCGG ATGCACCCGAATGGATGCGGCGGGGCGATTTTCACTCGACCTTGCCGGTTTGGGTGCGCGGCGAAATCCGCACCGGCTAC ACCTGCAACGTCCTGCTGCGCATGCGGTCGGACAGCCTGCGCGGCCGTCGCTTCAGCCTGGCGCGCGGCCAGACCGGCGG CGAGGACACCGAACTCTTCGATCAGATGGTCAAGGCCGGCGGCCGCATCGCCTTCGCTCAAGACGCCTGGGTGGACGAGG TGGTGCCGCGCTCAAGGGCCGCGTTCGACTGGCTCGGCCGCCGTCGTTTTCGCGTCGGCCAGACGCACGGTCACCTCTTG GGCAGCAATGCGCGTGGCATCGGGCTGATCAAGCATGTCGGCCTGGCCACCGCAAAGGCAGCCTTTTGTTTTGCCGCAGC CCTTCCCGTCGTCGCCAGCCCGGTGCGCAGGAACCGCAGCGTGCTGCGCGGCATCATGCATGTCGGCGTCGTCAGTGGCC TTGTCGGCGTCCGCGAACTCCGCCTCTACGGTCAATCGTCACCTGGGGAAGGAGGCAAGCGTGCAGCCTGA
Upstream 100 bases:
>100_bases TCGCGCTGGCCGGCGTCTCGGCCATGGTCATGCATTTCGGCTGGTCCGTCGGCTTCTGGCTGCAGCTTCTCGGCCTCGGC GCGCGACGCGGGGTGGCGTG
Downstream 100 bases:
>100_bases CGTTTCCTTCGCCCCCGATGTTTCCTTTGTGATCGCCTCCTACAATGCCGAGGCGACGCTCGACCGTGCGATTGCCAGCG CCATTGCGCAGAAGGGTGTT
Product: glycosyltransferase, succinoglycan biosynthesis protein EXOM
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MVVQAKNRSIDIGVCTFRRPELADTLRSLAAMAMPEGFDVSVIVADNDDTPSAQALVTALSQELALPVRYRHAPARNISV ARNACLDASEADFLAFIDDDETASTRWLAELVAKAEDSGATAVLGPVRALYRPDAPEWMRRGDFHSTLPVWVRGEIRTGY TCNVLLRMRSDSLRGRRFSLARGQTGGEDTELFDQMVKAGGRIAFAQDAWVDEVVPRSRAAFDWLGRRRFRVGQTHGHLL GSNARGIGLIKHVGLATAKAAFCFAAALPVVASPVRRNRSVLRGIMHVGVVSGLVGVRELRLYGQSSPGEGGKRAA
Sequences:
>Translated_316_residues MVVQAKNRSIDIGVCTFRRPELADTLRSLAAMAMPEGFDVSVIVADNDDTPSAQALVTALSQELALPVRYRHAPARNISV ARNACLDASEADFLAFIDDDETASTRWLAELVAKAEDSGATAVLGPVRALYRPDAPEWMRRGDFHSTLPVWVRGEIRTGY TCNVLLRMRSDSLRGRRFSLARGQTGGEDTELFDQMVKAGGRIAFAQDAWVDEVVPRSRAAFDWLGRRRFRVGQTHGHLL GSNARGIGLIKHVGLATAKAAFCFAAALPVVASPVRRNRSVLRGIMHVGVVSGLVGVRELRLYGQSSPGEGGKRAA >Mature_316_residues MVVQAKNRSIDIGVCTFRRPELADTLRSLAAMAMPEGFDVSVIVADNDDTPSAQALVTALSQELALPVRYRHAPARNISV ARNACLDASEADFLAFIDDDETASTRWLAELVAKAEDSGATAVLGPVRALYRPDAPEWMRRGDFHSTLPVWVRGEIRTGY TCNVLLRMRSDSLRGRRFSLARGQTGGEDTELFDQMVKAGGRIAFAQDAWVDEVVPRSRAAFDWLGRRRFRVGQTHGHLL GSNARGIGLIKHVGLATAKAAFCFAAALPVVASPVRRNRSVLRGIMHVGVVSGLVGVRELRLYGQSSPGEGGKRAA
Specific function: Glycosyltransferase required for the synthesis of succinoglycan (EPS I). Needed for the addition of the fourth sugar (glucose), catalyzes the formation of a beta-1,4 linkage between the third acetylated sugar and the fourth sugar [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 34308; Mature: 34308
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVQAKNRSIDIGVCTFRRPELADTLRSLAAMAMPEGFDVSVIVADNDDTPSAQALVTAL CEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHH SQELALPVRYRHAPARNISVARNACLDASEADFLAFIDDDETASTRWLAELVAKAEDSGA HHHHCCCHHCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCC TAVLGPVRALYRPDAPEWMRRGDFHSTLPVWVRGEIRTGYTCNVLLRMRSDSLRGRRFSL EEHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCEEEE ARGQTGGEDTELFDQMVKAGGRIAFAQDAWVDEVVPRSRAAFDWLGRRRFRVGQTHGHLL CCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEE GSNARGIGLIKHVGLATAKAAFCFAAALPVVASPVRRNRSVLRGIMHVGVVSGLVGVREL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLYGQSSPGEGGKRAA HHCCCCCCCCCCCCCC >Mature Secondary Structure MVVQAKNRSIDIGVCTFRRPELADTLRSLAAMAMPEGFDVSVIVADNDDTPSAQALVTAL CEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHH SQELALPVRYRHAPARNISVARNACLDASEADFLAFIDDDETASTRWLAELVAKAEDSGA HHHHCCCHHCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCC TAVLGPVRALYRPDAPEWMRRGDFHSTLPVWVRGEIRTGYTCNVLLRMRSDSLRGRRFSL EEHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCEEEE ARGQTGGEDTELFDQMVKAGGRIAFAQDAWVDEVVPRSRAAFDWLGRRRFRVGQTHGHLL CCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEE GSNARGIGLIKHVGLATAKAAFCFAAALPVVASPVRRNRSVLRGIMHVGVVSGLVGVREL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLYGQSSPGEGGKRAA HHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8226645; 8246891; 11481431 [H]