Click here to switch to the map view.

The map label for this gene is 13474354

Identifier: 13474354

GI number: 13474354

Start: 4154342

End: 4155679

Strand: Direct

Name: 13474354

Synonym: mlr5223

Alternate gene names: NA

Gene position: 4154342-4155679 (Clockwise)

Preceding gene: 13474353

Following gene: 13474355

Centisome position: 59.04

GC content: 62.56

Gene sequence:

>1338_bases
ATGAATTTCCTCAGCACAATCAAGGCGGCGGCGCTGTCCGCGGCGATGATCGTGTCGGTGGCCTTGCCGGCCGCCCACGC
CGACGAACAGTACTTTCCGCTGCAGAGCTATCGCGTCGGACCCTATGCGGCTGGCGGCACCGGCTTCTTCGGCGGCTTCA
TCGATTATCTCAACCTCATCAACATCCGCGACGGCGGCGTCAACGGCGTCAAGCTGACCTGGGACGAATGCGAGACACAG
TACGAGGTCGAGCGTGGCGTCGAATGCTATGAGCGGCAGAAGAGCCATGCCGGTGCCGCCGCCTGGAACCCGCTTTCGGT
CGGCATCGCCTATGCCATGATCGACCGCATCACCGCCGACAAGGTGCCGCTGATCACCGTCAATCACGGCCGCACCGATT
CCACCGACGGGCGCGTTTTCCCTTACGTTTTCCCGCTGCTGCTCAACCCCTACAGCGAGACCTCAGGCATCGTGAACTAC
ATCGCCGCCAAGGAAGGCGGCATCGACAAGCTCAAGGGCAAGAAGATCGTCGTGCTCTATCACGGCTCGCCCTACGGCAA
GGAGACCATCCCGATCTATGAATTGCTGGCGCAGAAATACGGCTTCACCGTCCAGCAGATCGAAGTGCCACATCCTGGCA
ACGAGCAGCAGTCGCAGTGGCTGACCATCCGTCGCGCCAAGCCGGACTTCGTCGTCCTGCGCGGCTGGGGCGTGATGAAC
CCGGTGGCGCTGAAAACGGCCGTCAAGGTCGGCTATCCCGTCGACCATATCGTCGGCAATGTCTGGTCGAATTCGGAAGA
GGACGTCATCCCGGCCGGCGACGCCGCCAGGGGCTACACCGCCATCACCACCCAGGCTTCCGGCAACACCTATCCGGTGG
TACAGGAGATCGTGAAGACGGTCTACGGCGCCGGCAAGGGCAACCTTGAAGACAAGTCCCGTATCGGCTCGGTCTACCAC
AATCTCGGCATCGTCAACGGCATCCTCAATGTCGAGGCGATCCGCGTCGCGCAGGAGAAGTTCGGCCACCGCACGCTGAC
CGGCGACGAAGTCCGCTGGGGCTTCGAACATCTCAAGCTCGATCCCGCCAAGGTCGAGGCGCTCGGCGCCAAGGACCTGT
TCCACTCGATCAATGTCAGCTGGGACAATCACGAGGGCGAGGGCTACGTGACCTTCCAGCAGTGGGACGGCAAGAAGTGG
AACGTCGTCTCCGACTGGATCGCGCCGGACTGGGCGCTGCTCAGGCCAATCATCGAGAAGTCGGCCGAGGCCTATGCCGC
CGAGAAGGGCATCAAGCTGCGCACCGCCGATGACGCCAACGCCGTGACCACCAACTGA

Upstream 100 bases:

>100_bases
GGCAGTCGACATGAGCCATGCGGGGCGACCCGCGCCGAACTGAATCGGAAAATGAACCAGAGGCCGAATCAAGACGGCCC
ATACCGGGAGTATCTCGACC

Downstream 100 bases:

>100_bases
TCAGCCAATGCCGGGCGCCACGGACAGGTTTCCGCGGCGCCCGGTCCTTACGGTTCTCGAACCGCGGAAGAAGAGCCCAT
GCCGGACAATGACGTCATCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MNFLSTIKAAALSAAMIVSVALPAAHADEQYFPLQSYRVGPYAAGGTGFFGGFIDYLNLINIRDGGVNGVKLTWDECETQ
YEVERGVECYERQKSHAGAAAWNPLSVGIAYAMIDRITADKVPLITVNHGRTDSTDGRVFPYVFPLLLNPYSETSGIVNY
IAAKEGGIDKLKGKKIVVLYHGSPYGKETIPIYELLAQKYGFTVQQIEVPHPGNEQQSQWLTIRRAKPDFVVLRGWGVMN
PVALKTAVKVGYPVDHIVGNVWSNSEEDVIPAGDAARGYTAITTQASGNTYPVVQEIVKTVYGAGKGNLEDKSRIGSVYH
NLGIVNGILNVEAIRVAQEKFGHRTLTGDEVRWGFEHLKLDPAKVEALGAKDLFHSINVSWDNHEGEGYVTFQQWDGKKW
NVVSDWIAPDWALLRPIIEKSAEAYAAEKGIKLRTADDANAVTTN

Sequences:

>Translated_445_residues
MNFLSTIKAAALSAAMIVSVALPAAHADEQYFPLQSYRVGPYAAGGTGFFGGFIDYLNLINIRDGGVNGVKLTWDECETQ
YEVERGVECYERQKSHAGAAAWNPLSVGIAYAMIDRITADKVPLITVNHGRTDSTDGRVFPYVFPLLLNPYSETSGIVNY
IAAKEGGIDKLKGKKIVVLYHGSPYGKETIPIYELLAQKYGFTVQQIEVPHPGNEQQSQWLTIRRAKPDFVVLRGWGVMN
PVALKTAVKVGYPVDHIVGNVWSNSEEDVIPAGDAARGYTAITTQASGNTYPVVQEIVKTVYGAGKGNLEDKSRIGSVYH
NLGIVNGILNVEAIRVAQEKFGHRTLTGDEVRWGFEHLKLDPAKVEALGAKDLFHSINVSWDNHEGEGYVTFQQWDGKKW
NVVSDWIAPDWALLRPIIEKSAEAYAAEKGIKLRTADDANAVTTN
>Mature_445_residues
MNFLSTIKAAALSAAMIVSVALPAAHADEQYFPLQSYRVGPYAAGGTGFFGGFIDYLNLINIRDGGVNGVKLTWDECETQ
YEVERGVECYERQKSHAGAAAWNPLSVGIAYAMIDRITADKVPLITVNHGRTDSTDGRVFPYVFPLLLNPYSETSGIVNY
IAAKEGGIDKLKGKKIVVLYHGSPYGKETIPIYELLAQKYGFTVQQIEVPHPGNEQQSQWLTIRRAKPDFVVLRGWGVMN
PVALKTAVKVGYPVDHIVGNVWSNSEEDVIPAGDAARGYTAITTQASGNTYPVVQEIVKTVYGAGKGNLEDKSRIGSVYH
NLGIVNGILNVEAIRVAQEKFGHRTLTGDEVRWGFEHLKLDPAKVEALGAKDLFHSINVSWDNHEGEGYVTFQQWDGKKW
NVVSDWIAPDWALLRPIIEKSAEAYAAEKGIKLRTADDANAVTTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48844; Mature: 48844

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS00037 MYB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFLSTIKAAALSAAMIVSVALPAAHADEQYFPLQSYRVGPYAAGGTGFFGGFIDYLNLI
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHEE
NIRDGGVNGVKLTWDECETQYEVERGVECYERQKSHAGAAAWNPLSVGIAYAMIDRITAD
EECCCCCCCEEEEHHHHCCHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
KVPLITVNHGRTDSTDGRVFPYVFPLLLNPYSETSGIVNYIAAKEGGIDKLKGKKIVVLY
CCCEEEEECCCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHCCCCEEEEEE
HGSPYGKETIPIYELLAQKYGFTVQQIEVPHPGNEQQSQWLTIRRAKPDFVVLRGWGVMN
CCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCCCCC
PVALKTAVKVGYPVDHIVGNVWSNSEEDVIPAGDAARGYTAITTQASGNTYPVVQEIVKT
CHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHH
VYGAGKGNLEDKSRIGSVYHNLGIVNGILNVEAIRVAQEKFGHRTLTGDEVRWGFEHLKL
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCHHHHCC
DPAKVEALGAKDLFHSINVSWDNHEGEGYVTFQQWDGKKWNVVSDWIAPDWALLRPIIEK
CHHHHHHCCHHHHHHHCCCEECCCCCCEEEEEEECCCCCCCEEHHHCCCCHHHHHHHHHH
SAEAYAAEKGIKLRTADDANAVTTN
HHHHHHHHCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MNFLSTIKAAALSAAMIVSVALPAAHADEQYFPLQSYRVGPYAAGGTGFFGGFIDYLNLI
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHEE
NIRDGGVNGVKLTWDECETQYEVERGVECYERQKSHAGAAAWNPLSVGIAYAMIDRITAD
EECCCCCCCEEEEHHHHCCHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
KVPLITVNHGRTDSTDGRVFPYVFPLLLNPYSETSGIVNYIAAKEGGIDKLKGKKIVVLY
CCCEEEEECCCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHCCCCEEEEEE
HGSPYGKETIPIYELLAQKYGFTVQQIEVPHPGNEQQSQWLTIRRAKPDFVVLRGWGVMN
CCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCCCCC
PVALKTAVKVGYPVDHIVGNVWSNSEEDVIPAGDAARGYTAITTQASGNTYPVVQEIVKT
CHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHH
VYGAGKGNLEDKSRIGSVYHNLGIVNGILNVEAIRVAQEKFGHRTLTGDEVRWGFEHLKL
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCHHHHCC
DPAKVEALGAKDLFHSINVSWDNHEGEGYVTFQQWDGKKWNVVSDWIAPDWALLRPIIEK
CHHHHHHCCHHHHHHHCCCEECCCCCCEEEEEEECCCCCCCEEHHHCCCCHHHHHHHHHH
SAEAYAAEKGIKLRTADDANAVTTN
HHHHHHHHCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA