| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474203
Identifier: 13474203
GI number: 13474203
Start: 3989908
End: 3990537
Strand: Direct
Name: 13474203
Synonym: mlr5040
Alternate gene names: NA
Gene position: 3989908-3990537 (Clockwise)
Preceding gene: 13474202
Following gene: 13474204
Centisome position: 56.71
GC content: 63.17
Gene sequence:
>630_bases ATGGCTACCGTCAAATTCACCGCGATGAAGGATGGCGACAGGCAAGACTACGAGTTCCTGACCGCCCATGAAATCGACTA CGCAGCCAAGACCGGCGAGCGGCTGCTCGAAGCGCTGGTCCAGCTCGACGAGGGCCTGTCCGGCTACAAGATCACCCGGC TTGGCCATTCGTTGCAGGCGGCGACGCGCGCCTGGCGCGACGGGGCCGACACCGACTGGATCGCCTGCGCGCTGCTGCAC GACATTGGCGACATCTACGCACCCTACAATCACGATGAGTACGCCGCTTCGATCCTGAAGCCTTTCGTGCGCGAGCAGTG CACCTGGGTGGTGGAAAAGCATGGCGACTTCCAGCGCCTCTATTACGCCCACCATCTCGGCGGCAACCGCCATGCCCGCG ACCGCTTCGCCGGCCACGCCTATTTCGACGATTGCGACCAGTTTTGCGAGCGCTGGGACCAGTCGAGCTTCGATCCCGAT TACGAGACGCTGCCGATCGATTTCTTCCGGCCCTTCGTGCTCGAGGTCTTCGCCCGCAAGGCCTACGACGCATCCGTGAT CCGCGCCGGCGAGCGCGTGCCTCTCATCGATCCCGAAACAGCCAGGACAAGAACCGGAGCTTCCGCATGA
Upstream 100 bases:
>100_bases ATCTCGGCGCCAGGATCCTCGGCCCGGAGGAAGTGCGCAAGAAACTCAACCTGACCAAGCGGGCGCCGATCGCAGCTGCG GCGTAAAAACGGGGTCTGAT
Downstream 100 bases:
>100_bases GCATCATCAACAAGGCGGCCGCCATTGGCGGCGGTGTCATCGGCGCCGGCTGGGTGGCGCGGCTGCTGCTCAACGGCATC GACGTGTCGATCTTCGATCC
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Phosphohydrolase HD Subdomain; Metal-Dependent Phosphohydrolase; HD Domain Protein; Phosphohydrolase; Phosphohydrolase Family Protein; HD Phosphohydrolase-Like Protein; Metal-Dependent Phosphohydrolase HD Subdomain Protein
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MATVKFTAMKDGDRQDYEFLTAHEIDYAAKTGERLLEALVQLDEGLSGYKITRLGHSLQAATRAWRDGADTDWIACALLH DIGDIYAPYNHDEYAASILKPFVREQCTWVVEKHGDFQRLYYAHHLGGNRHARDRFAGHAYFDDCDQFCERWDQSSFDPD YETLPIDFFRPFVLEVFARKAYDASVIRAGERVPLIDPETARTRTGASA
Sequences:
>Translated_209_residues MATVKFTAMKDGDRQDYEFLTAHEIDYAAKTGERLLEALVQLDEGLSGYKITRLGHSLQAATRAWRDGADTDWIACALLH DIGDIYAPYNHDEYAASILKPFVREQCTWVVEKHGDFQRLYYAHHLGGNRHARDRFAGHAYFDDCDQFCERWDQSSFDPD YETLPIDFFRPFVLEVFARKAYDASVIRAGERVPLIDPETARTRTGASA >Mature_208_residues ATVKFTAMKDGDRQDYEFLTAHEIDYAAKTGERLLEALVQLDEGLSGYKITRLGHSLQAATRAWRDGADTDWIACALLHD IGDIYAPYNHDEYAASILKPFVREQCTWVVEKHGDFQRLYYAHHLGGNRHARDRFAGHAYFDDCDQFCERWDQSSFDPDY ETLPIDFFRPFVLEVFARKAYDASVIRAGERVPLIDPETARTRTGASA
Specific function: Unknown
COG id: COG4341
COG function: function code R; Predicted HD phosphohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23935; Mature: 23804
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVKFTAMKDGDRQDYEFLTAHEIDYAAKTGERLLEALVQLDEGLSGYKITRLGHSLQA CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH ATRAWRDGADTDWIACALLHDIGDIYAPYNHDEYAASILKPFVREQCTWVVEKHGDFQRL HHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH YYAHHLGGNRHARDRFAGHAYFDDCDQFCERWDQSSFDPDYETLPIDFFRPFVLEVFARK HHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH AYDASVIRAGERVPLIDPETARTRTGASA HHHHHHHHCCCCCCCCCCCCHHCCCCCCC >Mature Secondary Structure ATVKFTAMKDGDRQDYEFLTAHEIDYAAKTGERLLEALVQLDEGLSGYKITRLGHSLQA CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH ATRAWRDGADTDWIACALLHDIGDIYAPYNHDEYAASILKPFVREQCTWVVEKHGDFQRL HHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH YYAHHLGGNRHARDRFAGHAYFDDCDQFCERWDQSSFDPDYETLPIDFFRPFVLEVFARK HHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH AYDASVIRAGERVPLIDPETARTRTGASA HHHHHHHHCCCCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA