| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13474133
Identifier: 13474133
GI number: 13474133
Start: 3923710
End: 3923964
Strand: Reverse
Name: 13474133
Synonym: msl4947
Alternate gene names: NA
Gene position: 3923964-3923710 (Counterclockwise)
Preceding gene: 13474134
Following gene: 13474132
Centisome position: 55.77
GC content: 64.71
Gene sequence:
>255_bases ATGCTTGAGCTGCGCCCAAATTGCGAGTGTTGCGACAAGGACCTGCCGCCGGAGGCGACGGATGCGCTGATCTGCACCTT CGAATGCACCTTCTGCGCCGATTGCGTGGAAAACGTGCTGGACGGCGTCTGTCCCAATTGCGGCGGCAATTTTTCGGCCC GGCCGATCCGCCCGGCAGCGAAGCTGAACAAATACCCGGCGTCGACCAAGCGCGTCCTCAAGGCCGAGGGCTGCGGCCCG CGCAAGGCCGCGTGA
Upstream 100 bases:
>100_bases GGCATCGCCGAGATGATCCATGACGTGCAAGTGGAAGCGACCTTCCCCGACGGCACCAAGCTGGTGACCGTGCACGCGCC CATCAGGTGAGGAGACCGCG
Downstream 100 bases:
>100_bases CTGCACCATCGCAAACGAAAGGCAAGTAGAATGATCCCTGCCAAACGCCTGTGCCTCGCGGCGATCCTGCTCATGGCTGC GGCCATGCCGGCCTATGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 84
Protein sequence:
>84_residues MLELRPNCECCDKDLPPEATDALICTFECTFCADCVENVLDGVCPNCGGNFSARPIRPAAKLNKYPASTKRVLKAEGCGP RKAA
Sequences:
>Translated_84_residues MLELRPNCECCDKDLPPEATDALICTFECTFCADCVENVLDGVCPNCGGNFSARPIRPAAKLNKYPASTKRVLKAEGCGP RKAA >Mature_84_residues MLELRPNCECCDKDLPPEATDALICTFECTFCADCVENVLDGVCPNCGGNFSARPIRPAAKLNKYPASTKRVLKAEGCGP RKAA
Specific function: Unknown
COG id: COG3813
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010696 - InterPro: IPR013083 [H]
Pfam domain/function: PF06906 DUF1272 [H]
EC number: NA
Molecular weight: Translated: 9022; Mature: 9022
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
11.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 13.1 %Cys+Met (Translated Protein) 11.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 13.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLELRPNCECCDKDLPPEATDALICTFECTFCADCVENVLDGVCPNCGGNFSARPIRPAA CCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH KLNKYPASTKRVLKAEGCGPRKAA HHCCCCCCHHHHHHCCCCCCCCCC >Mature Secondary Structure MLELRPNCECCDKDLPPEATDALICTFECTFCADCVENVLDGVCPNCGGNFSARPIRPAA CCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH KLNKYPASTKRVLKAEGCGPRKAA HHCCCCCCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8121412; 11481430 [H]