Click here to switch to the map view.

The map label for this gene is hupE [H]

Identifier: 13474132

GI number: 13474132

Start: 3923092

End: 3923679

Strand: Reverse

Name: hupE [H]

Synonym: mll4945

Alternate gene names: 13474132

Gene position: 3923679-3923092 (Counterclockwise)

Preceding gene: 13474133

Following gene: 13474131

Centisome position: 55.77

GC content: 69.22

Gene sequence:

>588_bases
ATGATCCCTGCCAAACGCCTGTGCCTCGCGGCGATCCTGCTCATGGCTGCGGCCATGCCGGCCTATGCCCATGTCGGCAT
CGGCACGACCTCTTCCTTCACGGCCGGCTTCATGCATCCCTTGTCCGGCCCCGACCATATGACCGTGATGCTCGCCGTCG
GCCTGTGGGCGGCCCTCAAGCGCGGCAAGGCAATTTGGGCGTGGCCGGCCGCCTTTATCGGCGTCATGCTTGGCGGCGCG
GCCCTGGGCATGGCGCATGTGCCGGTGCCCTTCGTCGAGCCGGGCATACTGGCCTCCGTCGTGGCGCTTGGCCTGCTGGT
GGCGCTGGCGGTCGACCTCCCGGTCTCGGCCGGCGTCGCCATTATCGGCCTGTTCGCGCTGTTCCACGGGCACGCACACG
GCACCGAGGCGCCGGAAAATGCCGGCGGGCTCGAATACATGGCCGGCTTTGCCGTCGCCACCGTGCTGCTCCATGCCGTC
GGCATCGCCGCGGGCATGGGCCTTGGCGTGAGGTTCCGTGGTCTGGCCCGTGTCGCCGGTGCTGCCTGCGCGGCGATCGG
CGTCGGTCTTGCCTTCAGCGTTGTGTGA

Upstream 100 bases:

>100_bases
GAACAAATACCCGGCGTCGACCAAGCGCGTCCTCAAGGCCGAGGGCTGCGGCCCGCGCAAGGCCGCGTGACTGCACCATC
GCAAACGAAAGGCAAGTAGA

Downstream 100 bases:

>100_bases
CATCAGATGATCCCCGGCGAAATCATCCCCGTCCAAGGCGACATCGAGCTCAACAAGGGCCTGCCGACCGTCACCCTGAA
AGTCGCCAACAGCGGCGACC

Product: urease accessory protein UreJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MIPAKRLCLAAILLMAAAMPAYAHVGIGTTSSFTAGFMHPLSGPDHMTVMLAVGLWAALKRGKAIWAWPAAFIGVMLGGA
ALGMAHVPVPFVEPGILASVVALGLLVALAVDLPVSAGVAIIGLFALFHGHAHGTEAPENAGGLEYMAGFAVATVLLHAV
GIAAGMGLGVRFRGLARVAGAACAAIGVGLAFSVV

Sequences:

>Translated_195_residues
MIPAKRLCLAAILLMAAAMPAYAHVGIGTTSSFTAGFMHPLSGPDHMTVMLAVGLWAALKRGKAIWAWPAAFIGVMLGGA
ALGMAHVPVPFVEPGILASVVALGLLVALAVDLPVSAGVAIIGLFALFHGHAHGTEAPENAGGLEYMAGFAVATVLLHAV
GIAAGMGLGVRFRGLARVAGAACAAIGVGLAFSVV
>Mature_195_residues
MIPAKRLCLAAILLMAAAMPAYAHVGIGTTSSFTAGFMHPLSGPDHMTVMLAVGLWAALKRGKAIWAWPAAFIGVMLGGA
ALGMAHVPVPFVEPGILASVVALGLLVALAVDLPVSAGVAIIGLFALFHGHAHGTEAPENAGGLEYMAGFAVATVLLHAV
GIAAGMGLGVRFRGLARVAGAACAAIGVGLAFSVV

Specific function: Needed for full hydrogenase activity [H]

COG id: COG2370

COG function: function code O; Hydrogenase/urease accessory protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007038 [H]

Pfam domain/function: PF04955 HupE_UreJ [H]

EC number: NA

Molecular weight: Translated: 19425; Mature: 19425

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPAKRLCLAAILLMAAAMPAYAHVGIGTTSSFTAGFMHPLSGPDHMTVMLAVGLWAALK
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
RGKAIWAWPAAFIGVMLGGAALGMAHVPVPFVEPGILASVVALGLLVALAVDLPVSAGVA
CCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH
IIGLFALFHGHAHGTEAPENAGGLEYMAGFAVATVLLHAVGIAAGMGLGVRFRGLARVAG
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AACAAIGVGLAFSVV
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MIPAKRLCLAAILLMAAAMPAYAHVGIGTTSSFTAGFMHPLSGPDHMTVMLAVGLWAALK
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
RGKAIWAWPAAFIGVMLGGAALGMAHVPVPFVEPGILASVVALGLLVALAVDLPVSAGVA
CCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH
IIGLFALFHGHAHGTEAPENAGGLEYMAGFAVATVLLHAVGIAAGMGLGVRFRGLARVAG
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AACAAIGVGLAFSVV
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597428 [H]