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The map label for this gene is ycjP [C]

Identifier: 13474114

GI number: 13474114

Start: 3908908

End: 3909732

Strand: Reverse

Name: ycjP [C]

Synonym: mll4924

Alternate gene names: 13474114

Gene position: 3909732-3908908 (Counterclockwise)

Preceding gene: 13474115

Following gene: 13474113

Centisome position: 55.57

GC content: 60.97

Gene sequence:

>825_bases
ATGGCACGTGCAGTCACCACCCAGCACAAGACAATCGCGACCGTTGCCGCCTGGATCGTCGCGCTGCTGATCTTCTTCCC
GATCCTCTATACGATCATCACCTCGTTCAAGTCGGAGCAGGAGGCGATCCAGGGCTTCAACCTGATCCCATCGGGGACGT
TCGAGAGCTATTCCGAGGTTCAGGCGCAGAGCGGCTACTTCAAGTTCTTCTTCAACTCGGTGCTGCTCTCGGTCGGCTCG
ACGATCCTGGCCCTGCTTGTCGCCATTCCGGCGGCATGGTCGATGGCGTTCTCCCCGACCAAGCGGACCAAGGACATCCT
GATGTGGATGCTGTCCACCAAGATGATGCCGGCGGTCGCCGTGCTGTTCCCGATCTACCTGATCTTCCGCGATTTCGGGC
TGCTCGACAGCCGCATCGGCCTGATGGTCATGCTGATGCTGATCAACCTGCCGATCGTGGTGTGGATGCTCTACACCTAT
TTCCGCGAAATCCCCGGCGAGATCCTGGAAGCGGCGCGCATGGACGGTGCGTCGCTGTGGAACGAGATCATCTATGTGCT
GACGCCGATGGCGGTGCCCGGCATCGCCTCGACCATGCTGTTGAACATCATCCTGGCCTGGAACGAGGCGTTCTGGACGA
TCCGCCTGACCACCACGGAAGCAGCGCCGCTGACCGCCTTCATCAGCTCGTTCTCAAGTCCGCAAGGCCTGTTCTGGGCC
AAGCTTTCGGCGGCCTCGACGCTGGCGATCGCGCCGATCCTGATCATGGGCTGGTTCAGCCAGAAGCAGCTGGTGCGCGG
CCTGACCTTTGGCGCCGTGAAGTAA

Upstream 100 bases:

>100_bases
ATCCGCAGGCGGTGTGATCGCCGTCATTCTCGCCAACATCGTTGCCTTCTTCGCCATGCGCGCCGTCGGCAAGAACCTGG
ACAAGTAAGGGAGGATTGAG

Downstream 100 bases:

>100_bases
GTAAGCCGTGACCTAACGTGACGCTCAAGAACGTCGGACAATAACCCCTCGGGGAGGAAACCATGGGAAACATCACGCTC
AAGAACGTCTCCAAGTCCTT

Product: sorbitol/mannitol transport inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MARAVTTQHKTIATVAAWIVALLIFFPILYTIITSFKSEQEAIQGFNLIPSGTFESYSEVQAQSGYFKFFFNSVLLSVGS
TILALLVAIPAAWSMAFSPTKRTKDILMWMLSTKMMPAVAVLFPIYLIFRDFGLLDSRIGLMVMLMLINLPIVVWMLYTY
FREIPGEILEAARMDGASLWNEIIYVLTPMAVPGIASTMLLNIILAWNEAFWTIRLTTTEAAPLTAFISSFSSPQGLFWA
KLSAASTLAIAPILIMGWFSQKQLVRGLTFGAVK

Sequences:

>Translated_274_residues
MARAVTTQHKTIATVAAWIVALLIFFPILYTIITSFKSEQEAIQGFNLIPSGTFESYSEVQAQSGYFKFFFNSVLLSVGS
TILALLVAIPAAWSMAFSPTKRTKDILMWMLSTKMMPAVAVLFPIYLIFRDFGLLDSRIGLMVMLMLINLPIVVWMLYTY
FREIPGEILEAARMDGASLWNEIIYVLTPMAVPGIASTMLLNIILAWNEAFWTIRLTTTEAAPLTAFISSFSSPQGLFWA
KLSAASTLAIAPILIMGWFSQKQLVRGLTFGAVK
>Mature_273_residues
ARAVTTQHKTIATVAAWIVALLIFFPILYTIITSFKSEQEAIQGFNLIPSGTFESYSEVQAQSGYFKFFFNSVLLSVGST
ILALLVAIPAAWSMAFSPTKRTKDILMWMLSTKMMPAVAVLFPIYLIFRDFGLLDSRIGLMVMLMLINLPIVVWMLYTYF
REIPGEILEAARMDGASLWNEIIYVLTPMAVPGIASTMLLNIILAWNEAFWTIRLTTTEAAPLTAFISSFSSPQGLFWAK
LSAASTLAIAPILIMGWFSQKQLVRGLTFGAVK

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=277, Percent_Identity=27.7978339350181, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1790464, Length=199, Percent_Identity=31.6582914572864, Blast_Score=78, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30467; Mature: 30336

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARAVTTQHKTIATVAAWIVALLIFFPILYTIITSFKSEQEAIQGFNLIPSGTFESYSEV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHH
QAQSGYFKFFFNSVLLSVGSTILALLVAIPAAWSMAFSPTKRTKDILMWMLSTKMMPAVA
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VLFPIYLIFRDFGLLDSRIGLMVMLMLINLPIVVWMLYTYFREIPGEILEAARMDGASLW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHH
NEIIYVLTPMAVPGIASTMLLNIILAWNEAFWTIRLTTTEAAPLTAFISSFSSPQGLFWA
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHHHHCCCCCCHHHH
KLSAASTLAIAPILIMGWFSQKQLVRGLTFGAVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ARAVTTQHKTIATVAAWIVALLIFFPILYTIITSFKSEQEAIQGFNLIPSGTFESYSEV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHH
QAQSGYFKFFFNSVLLSVGSTILALLVAIPAAWSMAFSPTKRTKDILMWMLSTKMMPAVA
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VLFPIYLIFRDFGLLDSRIGLMVMLMLINLPIVVWMLYTYFREIPGEILEAARMDGASLW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHH
NEIIYVLTPMAVPGIASTMLLNIILAWNEAFWTIRLTTTEAAPLTAFISSFSSPQGLFWA
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHHHHCCCCCCHHHH
KLSAASTLAIAPILIMGWFSQKQLVRGLTFGAVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]