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The map label for this gene is ycjO [C]

Identifier: 13474115

GI number: 13474115

Start: 3909745

End: 3910626

Strand: Reverse

Name: ycjO [C]

Synonym: mll4925

Alternate gene names: 13474115

Gene position: 3910626-3909745 (Counterclockwise)

Preceding gene: 13474116

Following gene: 13474114

Centisome position: 55.58

GC content: 59.75

Gene sequence:

>882_bases
GTGACCGTCATGGCTACTCAGCAGACCCGTTCGCTTGCCCGTTTCATGATGGCGCCATCCGTCGTGCTGCTGCTGGTCTG
GATGGTTATTCCACTGGCGCTCACGCTGTGGTTCTCCTTCCAACAGTACAACCCGCTCAATCCGATCCACGACGGGTTCG
TCGGCTTCTCGAATTACGCGCTGTTCTGGTCCAACCCGGCTTTCCTGCAGTCGATCCTCAACACGCTTGTCCTGGTGATC
AGCGTGCTGTTGATCACAGTGATCGGCGGCATCCTGCTGGCACTGCTGATCGACCAGCCGATGTGGGGACAAGGGATCGT
GCGCATCCTCGTCATCTCGCCGTTCTTCGTCATGCCGCCGGTGGCCGCATTGGTCTGGAAGAACATGATCATGCATCCGC
AATACGGGGTGTTCGCCGACATAGCGCGCTTCTTCGGGGCGCAACCGATCGACTGGTTCGGGCAACATCCGATGACGGCG
ATCATCATCATCGTCGCCTGGCAGTGGCTGCCTTTCGCGACGCTGATCCTGTTGACCGCGCTGCAGTCGCTCGACGGTGA
GCAGAAGGAGGCCGCCGAGATGGACGGCGCCGGCTTCATCAGCCGCTTCATCTATCTGACGCTGCCGCACATGTCGCGCG
CCATCACCGTCGTCATCCTGATCCAGACGATCTTCCTCTTGTCGGTCTATGCCGAAATCCTCGTCACCACCAATGGTGGC
CCTGGATACGCCTCCACCAACCTGCCTTTCCTCGTCTACCAGAAGGCGCTGCTGGAGTTCAAAATCGGCCAGGCATCCGC
AGGCGGTGTGATCGCCGTCATTCTCGCCAACATCGTTGCCTTCTTCGCCATGCGCGCCGTCGGCAAGAACCTGGACAAGT
AA

Upstream 100 bases:

>100_bases
CCGAATGCCGGTTGCCTCCTCGACCGGCAACGGCCGCCCGAGTTCCCAGCTCGGGCGGCCGCCTTCAACGCCTCTGAAAA
TTCAGTCTGACCATTGAAGG

Downstream 100 bases:

>100_bases
GGGAGGATTGAGATGGCACGTGCAGTCACCACCCAGCACAAGACAATCGCGACCGTTGCCGCCTGGATCGTCGCGCTGCT
GATCTTCTTCCCGATCCTCT

Product: sorbitol/mannitol transport inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MTVMATQQTRSLARFMMAPSVVLLLVWMVIPLALTLWFSFQQYNPLNPIHDGFVGFSNYALFWSNPAFLQSILNTLVLVI
SVLLITVIGGILLALLIDQPMWGQGIVRILVISPFFVMPPVAALVWKNMIMHPQYGVFADIARFFGAQPIDWFGQHPMTA
IIIIVAWQWLPFATLILLTALQSLDGEQKEAAEMDGAGFISRFIYLTLPHMSRAITVVILIQTIFLLSVYAEILVTTNGG
PGYASTNLPFLVYQKALLEFKIGQASAGGVIAVILANIVAFFAMRAVGKNLDK

Sequences:

>Translated_293_residues
MTVMATQQTRSLARFMMAPSVVLLLVWMVIPLALTLWFSFQQYNPLNPIHDGFVGFSNYALFWSNPAFLQSILNTLVLVI
SVLLITVIGGILLALLIDQPMWGQGIVRILVISPFFVMPPVAALVWKNMIMHPQYGVFADIARFFGAQPIDWFGQHPMTA
IIIIVAWQWLPFATLILLTALQSLDGEQKEAAEMDGAGFISRFIYLTLPHMSRAITVVILIQTIFLLSVYAEILVTTNGG
PGYASTNLPFLVYQKALLEFKIGQASAGGVIAVILANIVAFFAMRAVGKNLDK
>Mature_292_residues
TVMATQQTRSLARFMMAPSVVLLLVWMVIPLALTLWFSFQQYNPLNPIHDGFVGFSNYALFWSNPAFLQSILNTLVLVIS
VLLITVIGGILLALLIDQPMWGQGIVRILVISPFFVMPPVAALVWKNMIMHPQYGVFADIARFFGAQPIDWFGQHPMTAI
IIIVAWQWLPFATLILLTALQSLDGEQKEAAEMDGAGFISRFIYLTLPHMSRAITVVILIQTIFLLSVYAEILVTTNGGP
GYASTNLPFLVYQKALLEFKIGQASAGGVIAVILANIVAFFAMRAVGKNLDK

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=258, Percent_Identity=28.2945736434109, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1789861, Length=289, Percent_Identity=24.2214532871972, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1790465, Length=244, Percent_Identity=25.8196721311475, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32391; Mature: 32260

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVMATQQTRSLARFMMAPSVVLLLVWMVIPLALTLWFSFQQYNPLNPIHDGFVGFSNYA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEE
LFWSNPAFLQSILNTLVLVISVLLITVIGGILLALLIDQPMWGQGIVRILVISPFFVMPP
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHH
VAALVWKNMIMHPQYGVFADIARFFGAQPIDWFGQHPMTAIIIIVAWQWLPFATLILLTA
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LQSLDGEQKEAAEMDGAGFISRFIYLTLPHMSRAITVVILIQTIFLLSVYAEILVTTNGG
HHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
PGYASTNLPFLVYQKALLEFKIGQASAGGVIAVILANIVAFFAMRAVGKNLDK
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TVMATQQTRSLARFMMAPSVVLLLVWMVIPLALTLWFSFQQYNPLNPIHDGFVGFSNYA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEE
LFWSNPAFLQSILNTLVLVISVLLITVIGGILLALLIDQPMWGQGIVRILVISPFFVMPP
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHH
VAALVWKNMIMHPQYGVFADIARFFGAQPIDWFGQHPMTAIIIIVAWQWLPFATLILLTA
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LQSLDGEQKEAAEMDGAGFISRFIYLTLPHMSRAITVVILIQTIFLLSVYAEILVTTNGG
HHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
PGYASTNLPFLVYQKALLEFKIGQASAGGVIAVILANIVAFFAMRAVGKNLDK
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]